RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 C3orf79P0CE67 100 aa4.46□□□□□ -1.7
SRRM1-220ENST00000496882 DHRS4-AS1Q9P1J3 65 aa4.46□□□□□ -1.7
SRRM1-220ENST00000496882 SLC25A20O43772 301 aa4.45□□□□□ -1.7
SRRM1-220ENST00000496882 IGKV2-30P06310 120 aa4.45□□□□□ -1.7
SRRM1-220ENST00000496882 HIST3H2BBQ8N257 126 aa4.45□□□□□ -1.7
SRRM1-220ENST00000496882 PRO1933Q9H354 126 aa4.45□□□□□ -1.7
SRRM1-220ENST00000496882 SCGB1A1P11684 91 aa4.44□□□□□ -1.7
SRRM1-220ENST00000496882 COX7BP24311 80 aa4.44□□□□□ -1.7
SRRM1-220ENST00000496882 LITAFQ99732 161 aa4.44□□□□□ -1.7
SRRM1-220ENST00000496882 LAMTOR3Q9UHA4 124 aa4.44□□□□□ -1.7
SRRM1-220ENST00000496882 IFITM1P13164 125 aa4.43□□□□□ -1.7
SRRM1-220ENST00000496882 TAL2Q16559 108 aa4.43□□□□□ -1.7
SRRM1-220ENST00000496882 COA6Q5JTJ3 125 aaKnown RBP4.43□□□□□ -1.7
SRRM1-220ENST00000496882 Q6ZVH6 145 aa4.43□□□□□ -1.7
SRRM1-220ENST00000496882 Q8N377 158 aa4.43□□□□□ -1.7
SRRM1-220ENST00000496882 ST20-AS1Q8NBB2 130 aa4.43□□□□□ -1.7
SRRM1-220ENST00000496882 LIMD2Q9BT23 127 aa4.43□□□□□ -1.7
SRRM1-220ENST00000496882 A6NDN8 102 aa4.42□□□□□ -1.7
SRRM1-220ENST00000496882 ELOF1P60002 83 aaKnown RBP4.42□□□□□ -1.7
SRRM1-220ENST00000496882 C6orf99Q4VX62 202 aa4.42□□□□□ -1.7
SRRM1-220ENST00000496882 VPS25Q9BRG1 176 aa4.42□□□□□ -1.7
SRRM1-220ENST00000496882 TTTY13Q9BZ97 58 aa4.42□□□□□ -1.7
SRRM1-220ENST00000496882 KRTAP13-3Q3SY46 172 aa4.41□□□□□ -1.7
SRRM1-220ENST00000496882 ATOH7Q8N100 152 aa4.41□□□□□ -1.7
SRRM1-220ENST00000496882 DEFB105AQ8NG35 78 aa4.41□□□□□ -1.7
SRRM1-220ENST00000496882 SNHG12Q9BXW3 62 aa4.41□□□□□ -1.7
SRRM1-220ENST00000496882 TRBV7-6A0A0J9YX20 115 aa4.4□□□□□ -1.71
SRRM1-220ENST00000496882 A0A1B0GWB2 263 aa4.4□□□□□ -1.71
SRRM1-220ENST00000496882 SPRR1BP22528 89 aa4.4□□□□□ -1.71
SRRM1-220ENST00000496882 HIST1H2BLQ99880 126 aa4.4□□□□□ -1.71
SRRM1-220ENST00000496882 NHP2Q9NX24 153 aaKnown RBP4.4□□□□□ -1.71
SRRM1-220ENST00000496882 MUC17Q685J3 4493 aa4.39□□□□□ -1.71
SRRM1-220ENST00000496882 MUC2Q02817 5179 aa4.39□□□□□ -1.71
SRRM1-220ENST00000496882 TRAV13-2A0A0B4J235 113 aa4.39□□□□□ -1.71
SRRM1-220ENST00000496882 TEX49A0A1B0GTD5 131 aa4.39□□□□□ -1.71
SRRM1-220ENST00000496882 HRCT1Q6UXD1 115 aa4.39□□□□□ -1.71
SRRM1-220ENST00000496882 K7ERU9 68 aa4.38□□□□□ -1.71
SRRM1-220ENST00000496882 Q1RN00 199 aa4.38□□□□□ -1.71
SRRM1-220ENST00000496882 ASB16-AS1Q495Z4 193 aa4.38□□□□□ -1.71
SRRM1-220ENST00000496882 MUSTN1Q8IVN3 82 aa4.38□□□□□ -1.71
SRRM1-220ENST00000496882 MTURNQ8N3F0 131 aa4.38□□□□□ -1.71
SRRM1-220ENST00000496882 H7C2G1 150 aa4.37□□□□□ -1.71
SRRM1-220ENST00000496882 CD164Q04900 197 aa4.37□□□□□ -1.71
SRRM1-220ENST00000496882 VAMP3Q15836 100 aa4.37□□□□□ -1.71
SRRM1-220ENST00000496882 Q6ZVQ6 151 aa4.37□□□□□ -1.71
SRRM1-220ENST00000496882 PCP2Q8IVA1 136 aa4.37□□□□□ -1.71
SRRM1-220ENST00000496882 F8WEM9 126 aa4.36□□□□□ -1.71
SRRM1-220ENST00000496882 COL5A1-AS1Q5SY13 56 aa4.36□□□□□ -1.71
SRRM1-220ENST00000496882 LINC01547P58512 204 aaPredicted RBP4.34□□□□□ -1.71
SRRM1-220ENST00000496882 OCIAD2Q56VL3 154 aa4.34□□□□□ -1.71
SRRM1-220ENST00000496882 SMIM11BQ8TCY0 68 aa4.34□□□□□ -1.71
SRRM1-220ENST00000496882 IGLV5-48A0A075B6I7 105 aa4.33□□□□□ -1.72
SRRM1-220ENST00000496882 C9orf92A6NGG3 77 aa4.32□□□□□ -1.72
SRRM1-220ENST00000496882 TCL1BO95988 128 aa4.32□□□□□ -1.72
SRRM1-220ENST00000496882 C5orf47Q569G3 176 aa4.32□□□□□ -1.72
SRRM1-220ENST00000496882 hADV29S1A0JD25 119 aa4.31□□□□□ -1.72
SRRM1-220ENST00000496882 SMIM29Q86T20 159 aa4.31□□□□□ -1.72
SRRM1-220ENST00000496882 HIST1H4GQ99525 98 aa4.31□□□□□ -1.72
SRRM1-220ENST00000496882 FAT4Q6V0I7 4981 aa4.31□□□□□ -1.72
SRRM1-220ENST00000496882 SNCGO76070 127 aa4.3□□□□□ -1.72
SRRM1-220ENST00000496882 BATFQ16520 125 aa4.3□□□□□ -1.72
SRRM1-220ENST00000496882 BVES-AS1Q5T3Y7 98 aa4.3□□□□□ -1.72
SRRM1-220ENST00000496882 Q5XG85 94 aa4.3□□□□□ -1.72
SRRM1-220ENST00000496882 LINC00575Q6W349 94 aa4.3□□□□□ -1.72
SRRM1-220ENST00000496882 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
SRRM1-220ENST00000496882 FAM218AQ96MZ4 157 aa4.3□□□□□ -1.72
SRRM1-220ENST00000496882 Q6JHZ5 121 aa4.29□□□□□ -1.72
SRRM1-220ENST00000496882 Q6ZQY7 126 aa4.29□□□□□ -1.72
SRRM1-220ENST00000496882 VAMP8Q9BV40 100 aa4.29□□□□□ -1.72
SRRM1-220ENST00000496882 IGLV8-61A0A075B6I0 122 aa4.28□□□□□ -1.72
SRRM1-220ENST00000496882 PCOTHQ58A44 107 aa4.28□□□□□ -1.72
SRRM1-220ENST00000496882 IGKV2D-30A0A075B6S6 120 aa4.27□□□□□ -1.73
SRRM1-220ENST00000496882 A0A0G2JQZ4 141 aa4.27□□□□□ -1.73
SRRM1-220ENST00000496882 COX8AP10176 69 aa4.27□□□□□ -1.73
SRRM1-220ENST00000496882 C1orf195Q5TG92 126 aa4.27□□□□□ -1.73
SRRM1-220ENST00000496882 KRTAP5-3Q6L8H2 238 aa4.27□□□□□ -1.73
SRRM1-220ENST00000496882 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.27□□□□□ -1.73
SRRM1-220ENST00000496882 PPDPFLQ8WWR9 84 aa4.27□□□□□ -1.73
SRRM1-220ENST00000496882 CLEC2BQ92478 149 aa4.27□□□□□ -1.73
SRRM1-220ENST00000496882 RAB37Q96AX2 223 aa4.27□□□□□ -1.73
SRRM1-220ENST00000496882 KRTAP4-1Q9BYQ7 146 aa4.26□□□□□ -1.73
SRRM1-220ENST00000496882 UQCR10Q9UDW1 63 aa4.26□□□□□ -1.73
SRRM1-220ENST00000496882 SPATA45Q537H7 98 aa4.25□□□□□ -1.73
SRRM1-220ENST00000496882 Q8N9P0 234 aaPredicted RBP4.25□□□□□ -1.73
SRRM1-220ENST00000496882 TRBV7-7A0A0K0K1E9 115 aa4.24□□□□□ -1.73
SRRM1-220ENST00000496882 IGFL1Q6UW32 110 aa4.24□□□□□ -1.73
SRRM1-220ENST00000496882 H0YGX0 51 aa4.23□□□□□ -1.73
SRRM1-220ENST00000496882 RPL37P61927 97 aaKnown RBP4.23□□□□□ -1.73
SRRM1-220ENST00000496882 SIGMAR1Q99720 223 aa4.23□□□□□ -1.73
SRRM1-220ENST00000496882 SS18L2Q9UHA2 77 aa4.23□□□□□ -1.73
SRRM1-220ENST00000496882 A0A0B4J2C4 111 aa4.22□□□□□ -1.73
SRRM1-220ENST00000496882 LST1O00453 97 aa4.22□□□□□ -1.73
SRRM1-220ENST00000496882 HIGD1BQ9P298 99 aa4.22□□□□□ -1.73
SRRM1-220ENST00000496882 CFC1BP0CG36 223 aa4.21□□□□□ -1.74
SRRM1-220ENST00000496882 CFC1P0CG37 223 aa4.21□□□□□ -1.74
SRRM1-220ENST00000496882 H3BUT2 72 aa4.2□□□□□ -1.74
SRRM1-220ENST00000496882 COX6B2Q6YFQ2 88 aa4.2□□□□□ -1.74
SRRM1-220ENST00000496882 A0A1B0GX51 115 aa4.19□□□□□ -1.74
SRRM1-220ENST00000496882 NDUFV3P56181 108 aaKnown RBP4.19□□□□□ -1.74
SRRM1-220ENST00000496882 ATP11AUNQ6ZP68 121 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms