RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.63□□□□□ -2.15
SNX13-211ENST00000496855 ANK2Q01484 3957 aa1.63□□□□□ -2.15
SNX13-211ENST00000496855 A0A1B0GUL6 1792 aa1.63□□□□□ -2.15
SNX13-211ENST00000496855 TACC2O95359 2948 aa1.63□□□□□ -2.15
SNX13-211ENST00000496855 PDCD11Q14690 1871 aaKnown RBP1.63□□□□□ -2.15
SNX13-211ENST00000496855 MAP1AP78559 2803 aaPredicted RBP1.63□□□□□ -2.15
SNX13-211ENST00000496855 CNTRLQ7Z7A1 2325 aa1.63□□□□□ -2.15
SNX13-211ENST00000496855 A0A087WVE0 104 aa1.63□□□□□ -2.15
SNX13-211ENST00000496855 F2Z2F3 143 aa1.63□□□□□ -2.15
SNX13-211ENST00000496855 Q6ZRX8 168 aa1.63□□□□□ -2.15
SNX13-211ENST00000496855 DEFB119Q8N690 84 aa1.63□□□□□ -2.15
SNX13-211ENST00000496855 SVEP1Q4LDE5 3571 aa1.62□□□□□ -2.15
SNX13-211ENST00000496855 ADIRFQ15847 76 aa1.62□□□□□ -2.15
SNX13-211ENST00000496855 BVES-AS1Q5T3Y7 98 aa1.62□□□□□ -2.15
SNX13-211ENST00000496855 RGPD2P0DJD1 1756 aa1.61□□□□□ -2.15
SNX13-211ENST00000496855 A0A1B0GWA3 101 aa1.61□□□□□ -2.15
SNX13-211ENST00000496855 K7EIL1 84 aa1.61□□□□□ -2.15
SNX13-211ENST00000496855 ARMS2P0C7Q2 107 aa1.61□□□□□ -2.15
SNX13-211ENST00000496855 ABCA13Q86UQ4 5058 aa1.61□□□□□ -2.15
SNX13-211ENST00000496855 ZNF469Q96JG9 3925 aaPredicted RBP1.6□□□□□ -2.15
SNX13-211ENST00000496855 PLXNB2O15031 1838 aa1.6□□□□□ -2.15
SNX13-211ENST00000496855 DNAJC13O75165 2243 aa1.6□□□□□ -2.15
SNX13-211ENST00000496855 IQCF6A8MYZ5 107 aa1.6□□□□□ -2.15
SNX13-211ENST00000496855 IGLC2P0DOY2 106 aa1.6□□□□□ -2.15
SNX13-211ENST00000496855 IGLC3P0DOY3 106 aa1.6□□□□□ -2.15
SNX13-211ENST00000496855 SNRPFP62306 86 aaKnown RBP1.6□□□□□ -2.15
SNX13-211ENST00000496855 SMIM11BQ8TCY0 68 aa1.6□□□□□ -2.15
SNX13-211ENST00000496855 NFAT5O94916 1531 aa1.6□□□□□ -2.15
SNX13-211ENST00000496855 PRKDCP78527 4128 aaKnown RBP1.6□□□□□ -2.15
SNX13-211ENST00000496855 SONP18583 2426 aaKnown RBP1.59□□□□□ -2.15
SNX13-211ENST00000496855 HMGN2P05204 90 aaKnown RBP1.59□□□□□ -2.15
SNX13-211ENST00000496855 MGPP08493 103 aa1.59□□□□□ -2.15
SNX13-211ENST00000496855 SPINK13Q1W4C9 94 aa1.59□□□□□ -2.15
SNX13-211ENST00000496855 PROK2Q9HC23 129 aa1.59□□□□□ -2.15
SNX13-211ENST00000496855 PLAC8Q9NZF1 115 aa1.59□□□□□ -2.15
SNX13-211ENST00000496855 MYH4Q9Y623 1939 aa1.59□□□□□ -2.16
SNX13-211ENST00000496855 H3BUT2 72 aa1.58□□□□□ -2.16
SNX13-211ENST00000496855 SPINT3P49223 89 aa1.58□□□□□ -2.16
SNX13-211ENST00000496855 Q6ZSA8 131 aa1.58□□□□□ -2.16
SNX13-211ENST00000496855 CADP27708 2225 aa1.58□□□□□ -2.16
SNX13-211ENST00000496855 CD163L1Q9NR16 1453 aa1.58□□□□□ -2.16
SNX13-211ENST00000496855 LINC00643Q86TS7 51 aa1.57□□□□□ -2.16
SNX13-211ENST00000496855 SMIM4Q8WVI0 70 aa1.57□□□□□ -2.16
SNX13-211ENST00000496855 LAMA4Q16363 1823 aa1.57□□□□□ -2.16
SNX13-211ENST00000496855 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
SNX13-211ENST00000496855 SPINK7P58062 85 aa1.56□□□□□ -2.16
SNX13-211ENST00000496855 KRTAP10-4P60372 401 aaPredicted RBP1.56□□□□□ -2.16
SNX13-211ENST00000496855 COL7A1Q02388 2944 aa1.56□□□□□ -2.16
SNX13-211ENST00000496855 COX17Q14061 63 aa1.56□□□□□ -2.16
SNX13-211ENST00000496855 Q5BKY6 102 aa1.56□□□□□ -2.16
SNX13-211ENST00000496855 DEFB124Q8NES8 71 aa1.56□□□□□ -2.16
SNX13-211ENST00000496855 LINC00846Q9NV44 126 aa1.56□□□□□ -2.16
SNX13-211ENST00000496855 LEPROTL1O95214 131 aa1.55□□□□□ -2.16
SNX13-211ENST00000496855 SMIM11AP58511 58 aa1.55□□□□□ -2.16
SNX13-211ENST00000496855 DEFB107AQ8IZN7 70 aa1.55□□□□□ -2.16
SNX13-211ENST00000496855 ROS1P08922 2347 aa1.55□□□□□ -2.16
SNX13-211ENST00000496855 CACNA1CQ13936 2221 aa1.54□□□□□ -2.16
SNX13-211ENST00000496855 ANKRD50Q9ULJ7 1429 aa1.54□□□□□ -2.16
SNX13-211ENST00000496855 KANTRA0A1W2PQU2 76 aa1.54□□□□□ -2.16
SNX13-211ENST00000496855 GCHFRP30047 84 aa1.54□□□□□ -2.16
SNX13-211ENST00000496855 HMGN3Q15651 99 aa1.54□□□□□ -2.16
SNX13-211ENST00000496855 C10orf113Q5VZT2 155 aa1.54□□□□□ -2.16
SNX13-211ENST00000496855 TMEM263Q8WUH6 116 aaKnown RBP1.54□□□□□ -2.16
SNX13-211ENST00000496855 TRRAPQ9Y4A5 3859 aa1.53□□□□□ -2.16
SNX13-211ENST00000496855 MYMXA0A1B0GTQ4 84 aa1.53□□□□□ -2.16
SNX13-211ENST00000496855 D6R8Y8 96 aa1.53□□□□□ -2.16
SNX13-211ENST00000496855 SPATA8Q6RVD6 105 aa1.53□□□□□ -2.16
SNX13-211ENST00000496855 MUSTN1Q8IVN3 82 aa1.53□□□□□ -2.16
SNX13-211ENST00000496855 ACYP1P07311 99 aa1.52□□□□□ -2.17
SNX13-211ENST00000496855 Q6JHZ5 121 aa1.52□□□□□ -2.17
SNX13-211ENST00000496855 C18orf32Q8TCD1 76 aa1.52□□□□□ -2.17
SNX13-211ENST00000496855 GOLGA4Q13439 2230 aaKnown RBP1.52□□□□□ -2.17
SNX13-211ENST00000496855 CFDP00746 253 aaPredicted RBP1.51□□□□□ -2.17
SNX13-211ENST00000496855 SMCO4Q9NRQ5 59 aa1.51□□□□□ -2.17
SNX13-211ENST00000496855 PKDREJQ9NTG1 2253 aa1.51□□□□□ -2.17
SNX13-211ENST00000496855 SACSQ9NZJ4 4579 aa1.51□□□□□ -2.17
SNX13-211ENST00000496855 FAT4Q6V0I7 4981 aa1.5□□□□□ -2.17
SNX13-211ENST00000496855 HAMPP81172 84 aa1.5□□□□□ -2.17
SNX13-211ENST00000496855 DEFA5Q01523 94 aa1.5□□□□□ -2.17
SNX13-211ENST00000496855 UBE2D4Q9Y2X8 147 aa1.5□□□□□ -2.17
SNX13-211ENST00000496855 ANGP03950 147 aaKnown RBP1.49□□□□□ -2.17
SNX13-211ENST00000496855 PLGLAQ15195 96 aa1.49□□□□□ -2.17
SNX13-211ENST00000496855 H0Y9P7 68 aa1.48□□□□□ -2.17
SNX13-211ENST00000496855 PDCD5O14737 125 aa1.48□□□□□ -2.17
SNX13-211ENST00000496855 DEFB121Q5J5C9 76 aa1.48□□□□□ -2.17
SNX13-211ENST00000496855 C10orf95Q9H7T3 257 aa1.48□□□□□ -2.17
SNX13-211ENST00000496855 DYNC2H1Q8NCM8 4307 aaKnown RBP1.48□□□□□ -2.17
SNX13-211ENST00000496855 C6orf201Q7Z4U5 140 aa1.47□□□□□ -2.17
SNX13-211ENST00000496855 SMR3AQ99954 134 aa1.47□□□□□ -2.17
SNX13-211ENST00000496855 RNF213Q63HN8 5207 aa1.47□□□□□ -2.17
SNX13-211ENST00000496855 DNAH1Q9P2D7 4330 aa1.47□□□□□ -2.17
SNX13-211ENST00000496855 CEBPZOSA8MTT3 80 aa1.46□□□□□ -2.18
SNX13-211ENST00000496855 STAB2Q8WWQ8 2551 aa1.46□□□□□ -2.18
SNX13-211ENST00000496855 AKAP6Q13023 2319 aa1.46□□□□□ -2.18
SNX13-211ENST00000496855 FSIP2Q5CZC0 6907 aa1.45□□□□□ -2.18
SNX13-211ENST00000496855 CSMD3Q7Z407 3707 aa1.45□□□□□ -2.18
SNX13-211ENST00000496855 KIF20BQ96Q89 1820 aa1.45□□□□□ -2.18
SNX13-211ENST00000496855 FRAS1Q86XX4 4008 aa1.45□□□□□ -2.18
SNX13-211ENST00000496855 HECTD4Q9Y4D8 3996 aa1.44□□□□□ -2.18
SNX13-211ENST00000496855 TRBV7-4A0A0J9YYF1 115 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms