RNA–Protein interactions for RNA: ENST00000496489.5

NCK1-212, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-212ENST00000496489 CLPSL2Q6UWE3 100 aa0.79□□□□□ -2.28
NCK1-212ENST00000496489 DEFB123Q8N688 67 aa0.79□□□□□ -2.28
NCK1-212ENST00000496489 TP53AIP1Q9HCN2 124 aa0.79□□□□□ -2.28
NCK1-212ENST00000496489 ROS1P08922 2347 aa0.78□□□□□ -2.28
NCK1-212ENST00000496489 PDE4DIPQ5VU43 2346 aa0.78□□□□□ -2.28
NCK1-212ENST00000496489 IGLV5-48A0A075B6I7 105 aa0.78□□□□□ -2.28
NCK1-212ENST00000496489 MMP24-AS1A0A0U1RRL7 71 aa0.78□□□□□ -2.28
NCK1-212ENST00000496489 COL6A3P12111 3177 aa0.77□□□□□ -2.29
NCK1-212ENST00000496489 A0A0D9SG42 100 aa0.77□□□□□ -2.29
NCK1-212ENST00000496489 H0YAA0 97 aa0.77□□□□□ -2.29
NCK1-212ENST00000496489 LELP1Q5T871 98 aa0.77□□□□□ -2.29
NCK1-212ENST00000496489 A0A0C4DFX4 3053 aa0.77□□□□□ -2.29
NCK1-212ENST00000496489 ANKRD17O75179 2603 aaKnown RBP0.76□□□□□ -2.29
NCK1-212ENST00000496489 FAM208BQ5VWN6 2430 aa0.76□□□□□ -2.29
NCK1-212ENST00000496489 KNL1Q8NG31 2342 aa0.76□□□□□ -2.29
NCK1-212ENST00000496489 DEFB136Q30KP8 78 aa0.76□□□□□ -2.29
NCK1-212ENST00000496489 RHPN1-AS1Q9BWJ2 59 aa0.76□□□□□ -2.29
NCK1-212ENST00000496489 MUC5BQ9HC84 5762 aaPredicted RBP0.75□□□□□ -2.29
NCK1-212ENST00000496489 LYNX1G3V0Z9 82 aa0.75□□□□□ -2.29
NCK1-212ENST00000496489 SPINK1P00995 79 aa0.75□□□□□ -2.29
NCK1-212ENST00000496489 PRLHP81277 87 aa0.75□□□□□ -2.29
NCK1-212ENST00000496489 DEFB133Q30KQ1 61 aa0.75□□□□□ -2.29
NCK1-212ENST00000496489 WDR87Q6ZQQ6 2873 aa0.75□□□□□ -2.29
NCK1-212ENST00000496489 PLCE1Q9P212 2302 aa0.75□□□□□ -2.29
NCK1-212ENST00000496489 JMJD1CQ15652 2540 aa0.74□□□□□ -2.29
NCK1-212ENST00000496489 DEFB130BP0DP73 79 aa0.74□□□□□ -2.29
NCK1-212ENST00000496489 DEFB130AP0DP74 79 aa0.74□□□□□ -2.29
NCK1-212ENST00000496489 H1FX-AS1Q4G0G2 97 aa0.74□□□□□ -2.29
NCK1-212ENST00000496489 USMG5Q96IX5 58 aa0.74□□□□□ -2.29
NCK1-212ENST00000496489 MRPL34Q9BQ48 92 aaKnown RBP0.74□□□□□ -2.29
NCK1-212ENST00000496489 MGAQ8IWI9 3026 aa0.73□□□□□ -2.29
NCK1-212ENST00000496489 A0A096LPF7 62 aa0.73□□□□□ -2.29
NCK1-212ENST00000496489 DEFB131AP59861 70 aa0.73□□□□□ -2.29
NCK1-212ENST00000496489 KLK9Q2XQG4 91 aa0.73□□□□□ -2.29
NCK1-212ENST00000496489 DEFB109BQ30KR1 87 aa0.73□□□□□ -2.29
NCK1-212ENST00000496489 NOP10Q9NPE3 64 aaKnown RBP0.73□□□□□ -2.29
NCK1-212ENST00000496489 ASH1LQ9NR48 2969 aaKnown RBP0.72□□□□□ -2.29
NCK1-212ENST00000496489 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.72□□□□□ -2.29
NCK1-212ENST00000496489 IGF2RP11717 2491 aa0.72□□□□□ -2.29
NCK1-212ENST00000496489 A0A096LNI7 61 aa0.72□□□□□ -2.29
NCK1-212ENST00000496489 CHD7Q9P2D1 2997 aa0.72□□□□□ -2.29
NCK1-212ENST00000496489 PRO0255Q9UI72 69 aa0.72□□□□□ -2.29
NCK1-212ENST00000496489 Q9Y3F1 56 aa0.72□□□□□ -2.29
NCK1-212ENST00000496489 CACNA1EQ15878 2313 aa0.71□□□□□ -2.3
NCK1-212ENST00000496489 CHD6Q8TD26 2715 aa0.71□□□□□ -2.3
NCK1-212ENST00000496489 COX6B2Q6YFQ2 88 aa0.71□□□□□ -2.3
NCK1-212ENST00000496489 APLNQ9ULZ1 77 aa0.71□□□□□ -2.3
NCK1-212ENST00000496489 CEP350Q5VT06 3117 aa0.71□□□□□ -2.3
NCK1-212ENST00000496489 CNOT1A5YKK6 2376 aaKnown RBP0.71□□□□□ -2.3
NCK1-212ENST00000496489 SPTBN1Q01082 2364 aaKnown RBP0.71□□□□□ -2.3
NCK1-212ENST00000496489 ALMS1Q8TCU4 4167 aa0.71□□□□□ -2.3
NCK1-212ENST00000496489 PTPRZ1P23471 2315 aaPredicted RBP0.71□□□□□ -2.3
NCK1-212ENST00000496489 CFAP54Q96N23 3096 aa0.7□□□□□ -2.3
NCK1-212ENST00000496489 H3BUA1 57 aa0.7□□□□□ -2.3
NCK1-212ENST00000496489 SPRR1AP35321 89 aa0.7□□□□□ -2.3
NCK1-212ENST00000496489 Q5VSD8 79 aa0.7□□□□□ -2.3
NCK1-212ENST00000496489 SPINK6Q6UWN8 80 aa0.7□□□□□ -2.3
NCK1-212ENST00000496489 ZNF469Q96JG9 3925 aaPredicted RBP0.7□□□□□ -2.3
NCK1-212ENST00000496489 WNK1Q9H4A3 2382 aa0.7□□□□□ -2.3
NCK1-212ENST00000496489 SPTBN2O15020 2390 aa0.69□□□□□ -2.3
NCK1-212ENST00000496489 CENPFP49454 3210 aa0.69□□□□□ -2.3
NCK1-212ENST00000496489 SRCAPQ6ZRS2 3230 aa0.69□□□□□ -2.3
NCK1-212ENST00000496489 PCNTO95613 3336 aa0.69□□□□□ -2.3
NCK1-212ENST00000496489 GOLGB1Q14789 3259 aaKnown RBP0.69□□□□□ -2.3
NCK1-212ENST00000496489 SZT2Q5T011 3432 aa0.69□□□□□ -2.3
NCK1-212ENST00000496489 CFAP47Q6ZTR5 3102 aa0.69□□□□□ -2.3
NCK1-212ENST00000496489 TENM2Q9NT68 2774 aa0.68□□□□□ -2.3
NCK1-212ENST00000496489 WNK2Q9Y3S1 2297 aa0.68□□□□□ -2.3
NCK1-212ENST00000496489 UTRNP46939 3433 aa0.68□□□□□ -2.3
NCK1-212ENST00000496489 H3BUX3 64 aa0.68□□□□□ -2.3
NCK1-212ENST00000496489 HTN3P15516 51 aa0.68□□□□□ -2.3
NCK1-212ENST00000496489 SPRR1BP22528 89 aa0.68□□□□□ -2.3
NCK1-212ENST00000496489 S4R3F8 94 aa0.68□□□□□ -2.3
NCK1-212ENST00000496489 TPRP12270 2363 aaKnown RBP0.68□□□□□ -2.3
NCK1-212ENST00000496489 PCNX1Q96RV3 2341 aa0.67□□□□□ -2.3
NCK1-212ENST00000496489 C2CD3Q4AC94 2353 aa0.67□□□□□ -2.3
NCK1-212ENST00000496489 U3KQA8 63 aa0.67□□□□□ -2.3
NCK1-212ENST00000496489 OTOGQ6ZRI0 2925 aa0.67□□□□□ -2.3
NCK1-212ENST00000496489 PKDREJQ9NTG1 2253 aa0.67□□□□□ -2.3
NCK1-212ENST00000496489 RANBP2P49792 3224 aaKnown RBP0.66□□□□□ -2.3
NCK1-212ENST00000496489 AKAP6Q13023 2319 aa0.66□□□□□ -2.3
NCK1-212ENST00000496489 SPTBN4Q9H254 2564 aa0.66□□□□□ -2.3
NCK1-212ENST00000496489 NBEAQ8NFP9 2946 aa0.66□□□□□ -2.3
NCK1-212ENST00000496489 DEFB4AO15263 64 aa0.66□□□□□ -2.3
NCK1-212ENST00000496489 TNRC18O15417 2968 aaPredicted RBP0.66□□□□□ -2.3
NCK1-212ENST00000496489 ZZEF1O43149 2961 aa0.66□□□□□ -2.3
NCK1-212ENST00000496489 PRUNE2Q8WUY3 3088 aa0.66□□□□□ -2.3
NCK1-212ENST00000496489 VPS13AQ96RL7 3174 aa0.66□□□□□ -2.3
NCK1-212ENST00000496489 CEP250Q9BV73 2442 aa0.66□□□□□ -2.3
NCK1-212ENST00000496489 MKI67P46013 3256 aaKnown RBP0.65□□□□□ -2.3
NCK1-212ENST00000496489 FRYLO94915 3013 aa0.65□□□□□ -2.3
NCK1-212ENST00000496489 PIEZO2Q9H5I5 2752 aa0.65□□□□□ -2.3
NCK1-212ENST00000496489 DCHS1Q96JQ0 3298 aa0.65□□□□□ -2.31
NCK1-212ENST00000496489 CACNA1HO95180 2353 aa0.65□□□□□ -2.31
NCK1-212ENST00000496489 ZFHX4Q86UP3 3567 aa0.65□□□□□ -2.31
NCK1-212ENST00000496489 ACACAQ13085 2346 aa0.65□□□□□ -2.31
NCK1-212ENST00000496489 BOD1L1Q8NFC6 3051 aa0.65□□□□□ -2.31
NCK1-212ENST00000496489 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.31
NCK1-212ENST00000496489 UNC80Q8N2C7 3258 aa0.65□□□□□ -2.31
NCK1-212ENST00000496489 WDFY4Q6ZS81 3184 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms