RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 ROMO1P60602 79 aa3.76□□□□□ -1.81
PHC3-214ENST00000494943 MYO18BQ8IUG5 2567 aa3.76□□□□□ -1.81
PHC3-214ENST00000494943 FLNCQ14315 2725 aa3.76□□□□□ -1.81
PHC3-214ENST00000494943 APC2O95996 2303 aa3.76□□□□□ -1.81
PHC3-214ENST00000494943 FAM208BQ5VWN6 2430 aa3.75□□□□□ -1.81
PHC3-214ENST00000494943 COL6A6A6NMZ7 2263 aa3.75□□□□□ -1.81
PHC3-214ENST00000494943 SPTBN1Q01082 2364 aaKnown RBP3.75□□□□□ -1.81
PHC3-214ENST00000494943 A0A0G2JQZ4 141 aa3.75□□□□□ -1.81
PHC3-214ENST00000494943 A0A1W2PNN7 141 aa3.75□□□□□ -1.81
PHC3-214ENST00000494943 ZNF469Q96JG9 3925 aaPredicted RBP3.74□□□□□ -1.81
PHC3-214ENST00000494943 KRTAP16-1A8MUX0 517 aa3.74□□□□□ -1.81
PHC3-214ENST00000494943 UTP20O75691 2785 aaKnown RBP3.74□□□□□ -1.81
PHC3-214ENST00000494943 INAFM1C9JVW0 142 aa3.74□□□□□ -1.81
PHC3-214ENST00000494943 A0A1B0GU33 70 aa3.73□□□□□ -1.81
PHC3-214ENST00000494943 ADM2Q7Z4H4 148 aa3.73□□□□□ -1.81
PHC3-214ENST00000494943 ANKHD1Q8IWZ3 2542 aaKnown RBP3.73□□□□□ -1.81
PHC3-214ENST00000494943 ATRXP46100 2492 aa3.73□□□□□ -1.81
PHC3-214ENST00000494943 HELZ2Q9BYK8 2649 aaKnown RBP3.73□□□□□ -1.81
PHC3-214ENST00000494943 PRRC2CQ9Y520 2896 aaKnown RBP3.73□□□□□ -1.81
PHC3-214ENST00000494943 PTPRZ1P23471 2315 aaPredicted RBP3.73□□□□□ -1.81
PHC3-214ENST00000494943 BAHCC1Q9P281 2608 aa3.72□□□□□ -1.81
PHC3-214ENST00000494943 ZNF861PO60384 105 aa3.72□□□□□ -1.81
PHC3-214ENST00000494943 Q5W150 140 aa3.72□□□□□ -1.81
PHC3-214ENST00000494943 OTOGQ6ZRI0 2925 aa3.71□□□□□ -1.82
PHC3-214ENST00000494943 SORL1Q92673 2214 aa3.71□□□□□ -1.82
PHC3-214ENST00000494943 LINC00483Q53H64 154 aa3.7□□□□□ -1.82
PHC3-214ENST00000494943 ZFYVE26Q68DK2 2539 aa3.7□□□□□ -1.82
PHC3-214ENST00000494943 CELSR2Q9HCU4 2923 aa3.7□□□□□ -1.82
PHC3-214ENST00000494943 RP1L1Q8IWN7 2480 aaPredicted RBP3.7□□□□□ -1.82
PHC3-214ENST00000494943 CSMD2Q7Z408 3487 aa3.69□□□□□ -1.82
PHC3-214ENST00000494943 ANK3Q12955 4377 aaKnown RBP3.69□□□□□ -1.82
PHC3-214ENST00000494943 CRYBG3Q68DQ2 2970 aa3.69□□□□□ -1.82
PHC3-214ENST00000494943 APCP25054 2843 aa3.69□□□□□ -1.82
PHC3-214ENST00000494943 A0A0A0MQY5 61 aa3.68□□□□□ -1.82
PHC3-214ENST00000494943 ZNF462Q96JM2 2506 aa3.68□□□□□ -1.82
PHC3-214ENST00000494943 USP9XQ93008 2570 aaPredicted RBP3.68□□□□□ -1.82
PHC3-214ENST00000494943 ACACAQ13085 2346 aa3.68□□□□□ -1.82
PHC3-214ENST00000494943 TLN1Q9Y490 2541 aaKnown RBP3.68□□□□□ -1.82
PHC3-214ENST00000494943 J3QKU1 62 aa3.67□□□□□ -1.82
PHC3-214ENST00000494943 SETXQ7Z333 2677 aaKnown RBP3.67□□□□□ -1.82
PHC3-214ENST00000494943 H1FX-AS1Q4G0G2 97 aa3.67□□□□□ -1.82
PHC3-214ENST00000494943 ANAPC11Q9NYG5 84 aa3.67□□□□□ -1.82
PHC3-214ENST00000494943 ANK2Q01484 3957 aa3.66□□□□□ -1.82
PHC3-214ENST00000494943 WNK1Q9H4A3 2382 aa3.66□□□□□ -1.82
PHC3-214ENST00000494943 IGLV5-52A0A0A0MRZ9 124 aa3.66□□□□□ -1.82
PHC3-214ENST00000494943 ABCA2Q9BZC7 2435 aa3.65□□□□□ -1.82
PHC3-214ENST00000494943 DOPEY1Q5JWR5 2465 aa3.65□□□□□ -1.83
PHC3-214ENST00000494943 CR1P17927 2039 aa3.65□□□□□ -1.83
PHC3-214ENST00000494943 Q96NJ1 140 aa3.65□□□□□ -1.83
PHC3-214ENST00000494943 COL12A1Q99715 3063 aa3.64□□□□□ -1.83
PHC3-214ENST00000494943 PANO1I0J062 215 aa3.64□□□□□ -1.83
PHC3-214ENST00000494943 UNC79Q9P2D8 2635 aa3.64□□□□□ -1.83
PHC3-214ENST00000494943 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
PHC3-214ENST00000494943 HIVEP3Q5T1R4 2406 aa3.63□□□□□ -1.83
PHC3-214ENST00000494943 A8MUU9 505 aa3.63□□□□□ -1.83
PHC3-214ENST00000494943 COX6B2Q6YFQ2 88 aa3.63□□□□□ -1.83
PHC3-214ENST00000494943 PTPN13Q12923 2485 aa3.63□□□□□ -1.83
PHC3-214ENST00000494943 USP9YO00507 2555 aaPredicted RBP3.62□□□□□ -1.83
PHC3-214ENST00000494943 PCNX1Q96RV3 2341 aa3.62□□□□□ -1.83
PHC3-214ENST00000494943 ITPR2Q14571 2701 aa3.62□□□□□ -1.83
PHC3-214ENST00000494943 CASC10Q5T4H9 136 aa3.62□□□□□ -1.83
PHC3-214ENST00000494943 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.61□□□□□ -1.832e-6■■■■■ 33.4
PHC3-214ENST00000494943 CMYA5Q8N3K9 4069 aa3.61□□□□□ -1.83
PHC3-214ENST00000494943 RPL37P61927 97 aaKnown RBP3.61□□□□□ -1.83
PHC3-214ENST00000494943 TEX15Q9BXT5 2789 aa3.6□□□□□ -1.83
PHC3-214ENST00000494943 NBDYA0A0U1RRE5 68 aa3.6□□□□□ -1.83
PHC3-214ENST00000494943 DNAH1Q9P2D7 4330 aa3.6□□□□□ -1.83
PHC3-214ENST00000494943 KRTAP10-9P60411 292 aa3.6□□□□□ -1.83
PHC3-214ENST00000494943 CUBNO60494 3623 aa3.59□□□□□ -1.83
PHC3-214ENST00000494943 SEC61BP60468 96 aaKnown RBP3.59□□□□□ -1.83
PHC3-214ENST00000494943 SPACA4Q8TDM5 124 aa3.59□□□□□ -1.83
PHC3-214ENST00000494943 WWC2-AS2Q96NR7 200 aa3.59□□□□□ -1.83
PHC3-214ENST00000494943 LINC00304Q8N9R0 145 aa3.59□□□□□ -1.84
PHC3-214ENST00000494943 KRTAP1-3Q8IUG1 177 aa3.59□□□□□ -1.84
PHC3-214ENST00000494943 Q8N1X5 172 aa3.58□□□□□ -1.84
PHC3-214ENST00000494943 APLNQ9ULZ1 77 aa3.58□□□□□ -1.84
PHC3-214ENST00000494943 KRTAP21-3Q3LHN1 58 aa3.58□□□□□ -1.84
PHC3-214ENST00000494943 CENPEQ02224 2701 aa3.58□□□□□ -1.84
PHC3-214ENST00000494943 PSORS1C2Q9UIG4 136 aa3.58□□□□□ -1.84
PHC3-214ENST00000494943 KRTAP10-3P60369 221 aa3.57□□□□□ -1.84
PHC3-214ENST00000494943 KRTAP11-1Q8IUC1 163 aa3.57□□□□□ -1.84
PHC3-214ENST00000494943 KRTAP7-1Q8IUC3 87 aa3.57□□□□□ -1.84
PHC3-214ENST00000494943 AKAP6Q13023 2319 aa3.57□□□□□ -1.84
PHC3-214ENST00000494943 C20orf166-AS1Q96NR2 134 aa3.57□□□□□ -1.84
PHC3-214ENST00000494943 NF1P21359 2839 aa3.56□□□□□ -1.84
PHC3-214ENST00000494943 K7EIL1 84 aa3.56□□□□□ -1.84
PHC3-214ENST00000494943 DNAH3Q8TD57 4116 aa3.56□□□□□ -1.84
PHC3-214ENST00000494943 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
PHC3-214ENST00000494943 CREBBPQ92793 2442 aa3.55□□□□□ -1.84
PHC3-214ENST00000494943 SPTA1P02549 2419 aa3.55□□□□□ -1.84
PHC3-214ENST00000494943 KRTAP13-1Q8IUC0 172 aa3.55□□□□□ -1.84
PHC3-214ENST00000494943 DNHD1Q96M86 4753 aa3.55□□□□□ -1.84
PHC3-214ENST00000494943 ABCA12Q86UK0 2595 aa3.55□□□□□ -1.84
PHC3-214ENST00000494943 FASNP49327 2511 aaKnown RBP3.55□□□□□ -1.84
PHC3-214ENST00000494943 SPTAN1Q13813 2472 aaKnown RBP3.54□□□□□ -1.84
PHC3-214ENST00000494943 TYMSOSQ8TAI1 123 aa3.54□□□□□ -1.84
PHC3-214ENST00000494943 LRRK2Q5S007 2527 aa3.54□□□□□ -1.84
PHC3-214ENST00000494943 NOTCH3Q9UM47 2321 aa3.53□□□□□ -1.84
PHC3-214ENST00000494943 MAST4O15021 2626 aa3.53□□□□□ -1.84
PHC3-214ENST00000494943 HIVEP1P15822 2718 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms