RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 APOC4P55056 127 aa6.39□□□□□ -1.39
LINC00488-201ENST00000494582 C7orf65Q6ZTY9 151 aa6.39□□□□□ -1.39
LINC00488-201ENST00000494582 BAHCC1Q9P281 2608 aa6.38□□□□□ -1.39
LINC00488-201ENST00000494582 SPINK7P58062 85 aa6.38□□□□□ -1.39
LINC00488-201ENST00000494582 CASC2Q6XLA1 102 aa6.38□□□□□ -1.39
LINC00488-201ENST00000494582 DEFB113Q30KQ7 82 aa6.37□□□□□ -1.39
LINC00488-201ENST00000494582 PLAC8Q9NZF1 115 aa6.37□□□□□ -1.39
LINC00488-201ENST00000494582 SPART-AS1P0CW21 52 aa6.37□□□□□ -1.39
LINC00488-201ENST00000494582 LCE2DQ5TA82 110 aaPredicted RBP6.37□□□□□ -1.39
LINC00488-201ENST00000494582 SPAG11AQ6PDA7 123 aa6.37□□□□□ -1.39
LINC00488-201ENST00000494582 IGLV7-46A0A075B6I9 117 aa6.35□□□□□ -1.39
LINC00488-201ENST00000494582 H3BPC8 53 aa6.35□□□□□ -1.39
LINC00488-201ENST00000494582 PDZD2O15018 2839 aa6.35□□□□□ -1.39
LINC00488-201ENST00000494582 ZNF462Q96JM2 2506 aa6.35□□□□□ -1.39
LINC00488-201ENST00000494582 C8orf87E5RJ46 101 aa6.34□□□□□ -1.39
LINC00488-201ENST00000494582 PCOTHQ58A44 107 aa6.34□□□□□ -1.39
LINC00488-201ENST00000494582 PLA2G2DQ9UNK4 145 aa6.34□□□□□ -1.39
LINC00488-201ENST00000494582 TENM1Q9UKZ4 2725 aa6.33□□□□□ -1.4
LINC00488-201ENST00000494582 DNAH1Q9P2D7 4330 aa6.33□□□□□ -1.4
LINC00488-201ENST00000494582 IGLV5-37A0A075B6J1 123 aa6.33□□□□□ -1.4
LINC00488-201ENST00000494582 CASC10Q5T4H9 136 aa6.33□□□□□ -1.4
LINC00488-201ENST00000494582 LINC01558Q9Y6Z2 57 aa6.33□□□□□ -1.4
LINC00488-201ENST00000494582 UBR5O95071 2799 aaPredicted RBP6.33□□□□□ -1.4
LINC00488-201ENST00000494582 TENM2Q9NT68 2774 aa6.33□□□□□ -1.4
LINC00488-201ENST00000494582 PRAC1Q96KF2 57 aa6.32□□□□□ -1.4
LINC00488-201ENST00000494582 C4orf48Q5BLP8 95 aa6.32□□□□□ -1.4
LINC00488-201ENST00000494582 TLX1NBP0CAT3 122 aa6.31□□□□□ -1.4
LINC00488-201ENST00000494582 PRLHP81277 87 aa6.31□□□□□ -1.4
LINC00488-201ENST00000494582 TEP1Q99973 2627 aaKnown RBP6.29□□□□□ -1.4
LINC00488-201ENST00000494582 IGLV8-61A0A075B6I0 122 aa6.29□□□□□ -1.4
LINC00488-201ENST00000494582 A8MWP4 228 aa6.29□□□□□ -1.4
LINC00488-201ENST00000494582 KRTAP1-1Q07627 177 aa6.29□□□□□ -1.4
LINC00488-201ENST00000494582 REG3GQ6UW15 175 aa6.29□□□□□ -1.4
LINC00488-201ENST00000494582 ADM2Q7Z4H4 148 aa6.29□□□□□ -1.4
LINC00488-201ENST00000494582 LINC00472Q9H8W2 130 aa6.29□□□□□ -1.4
LINC00488-201ENST00000494582 MMP24-AS1A0A0U1RRL7 71 aa6.29□□□□□ -1.4
LINC00488-201ENST00000494582 TENM3Q9P273 2699 aa6.28□□□□□ -1.4
LINC00488-201ENST00000494582 LINC00313P59037 77 aa6.28□□□□□ -1.4
LINC00488-201ENST00000494582 HRES1P13985 223 aa6.27□□□□□ -1.41
LINC00488-201ENST00000494582 FBN1P35555 2871 aaKnown RBP6.27□□□□□ -1.41
LINC00488-201ENST00000494582 ANK2Q01484 3957 aa6.26□□□□□ -1.41
LINC00488-201ENST00000494582 LINC01556Q5JQF7 62 aa6.26□□□□□ -1.41
LINC00488-201ENST00000494582 DNAH10Q8IVF4 4471 aa6.26□□□□□ -1.41
LINC00488-201ENST00000494582 H0Y9J4 135 aa6.24□□□□□ -1.41
LINC00488-201ENST00000494582 USP24Q9UPU5 2620 aa6.23□□□□□ -1.41
LINC00488-201ENST00000494582 KRTAP11-1Q8IUC1 163 aa6.22□□□□□ -1.41
LINC00488-201ENST00000494582 ALMS1Q8TCU4 4167 aa6.22□□□□□ -1.41
LINC00488-201ENST00000494582 A0A096LNI7 61 aa6.22□□□□□ -1.41
LINC00488-201ENST00000494582 H3BNG1 76 aa6.22□□□□□ -1.41
LINC00488-201ENST00000494582 IGKV2-24A0A0C4DH68 120 aa6.21□□□□□ -1.42
LINC00488-201ENST00000494582 PRR26Q8N8Z3 221 aa6.21□□□□□ -1.42
LINC00488-201ENST00000494582 ASB16-AS1Q495Z4 193 aa6.2□□□□□ -1.42
LINC00488-201ENST00000494582 LYSTQ99698 3801 aa6.19□□□□□ -1.42
LINC00488-201ENST00000494582 ITPR2Q14571 2701 aa6.19□□□□□ -1.42
LINC00488-201ENST00000494582 COL7A1Q02388 2944 aa6.19□□□□□ -1.42
LINC00488-201ENST00000494582 Q6ZR54 194 aa6.19□□□□□ -1.42
LINC00488-201ENST00000494582 H3BS24 57 aa6.18□□□□□ -1.42
LINC00488-201ENST00000494582 NOTCH2Q04721 2471 aa6.18□□□□□ -1.42
LINC00488-201ENST00000494582 DNAH10OSP0CZ25 163 aa6.18□□□□□ -1.42
LINC00488-201ENST00000494582 Q96NJ1 140 aa6.18□□□□□ -1.42
LINC00488-201ENST00000494582 ATRQ13535 2644 aa6.17□□□□□ -1.42
LINC00488-201ENST00000494582 K7EIL1 84 aa6.16□□□□□ -1.42
LINC00488-201ENST00000494582 SMR3AQ99954 134 aa6.16□□□□□ -1.42
LINC00488-201ENST00000494582 LINC01554Q52M75 96 aa6.15□□□□□ -1.42
LINC00488-201ENST00000494582 PLA2G1BP04054 148 aaKnown RBP6.15□□□□□ -1.43
LINC00488-201ENST00000494582 SPRR1BP22528 89 aa6.14□□□□□ -1.43
LINC00488-201ENST00000494582 C8orf17Q9NRJ1 99 aa6.14□□□□□ -1.43
LINC00488-201ENST00000494582 A0A087X002 238 aa6.13□□□□□ -1.43
LINC00488-201ENST00000494582 DEFB131BA0A096LNP1 70 aa6.13□□□□□ -1.43
LINC00488-201ENST00000494582 NOTCH2NLQ7Z3S9 236 aa6.13□□□□□ -1.43
LINC00488-201ENST00000494582 TP53AIP1Q9HCN2 124 aa6.13□□□□□ -1.43
LINC00488-201ENST00000494582 TENM4Q6N022 2769 aa6.12□□□□□ -1.43
LINC00488-201ENST00000494582 MDFIQ99750 246 aa6.11□□□□□ -1.43
LINC00488-201ENST00000494582 FLNBO75369 2602 aaKnown RBP6.11□□□□□ -1.43
LINC00488-201ENST00000494582 RTL8CO15255 209 aa6.11□□□□□ -1.43
LINC00488-201ENST00000494582 HELZ2Q9BYK8 2649 aaKnown RBP6.1□□□□□ -1.43
LINC00488-201ENST00000494582 DNAH9Q9NYC9 4486 aa6.1□□□□□ -1.43
LINC00488-201ENST00000494582 IGHV6-1A0A0B4J1U7 121 aa6.1□□□□□ -1.43
LINC00488-201ENST00000494582 CHTF8P0CG12 524 aa6.1□□□□□ -1.43
LINC00488-201ENST00000494582 Q5W150 140 aa6.08□□□□□ -1.44
LINC00488-201ENST00000494582 HECTD1Q9ULT8 2610 aa6.07□□□□□ -1.44
LINC00488-201ENST00000494582 A0A1B0GVX0 72 aa6.06□□□□□ -1.44
LINC00488-201ENST00000494582 KRTAP10-11P60412 298 aa6.06□□□□□ -1.44
LINC00488-201ENST00000494582 MRPL34Q9BQ48 92 aaKnown RBP6.05□□□□□ -1.44
LINC00488-201ENST00000494582 CMYA5Q8N3K9 4069 aa6.05□□□□□ -1.44
LINC00488-201ENST00000494582 IGLV9-49A0A0B4J1Y8 123 aa6.05□□□□□ -1.44
LINC00488-201ENST00000494582 KRTAP13-3Q3SY46 172 aa6.05□□□□□ -1.44
LINC00488-201ENST00000494582 OXLD1Q5BKU9 147 aa6.05□□□□□ -1.44
LINC00488-201ENST00000494582 SPATA8Q6RVD6 105 aa6.04□□□□□ -1.44
LINC00488-201ENST00000494582 MAST4O15021 2626 aa6.03□□□□□ -1.44
LINC00488-201ENST00000494582 CSAG1Q6PB30 78 aa6.03□□□□□ -1.44
LINC00488-201ENST00000494582 KRTAP1-5Q9BYS1 174 aa6.02□□□□□ -1.45
LINC00488-201ENST00000494582 FASNP49327 2511 aaKnown RBP6.02□□□□□ -1.45
LINC00488-201ENST00000494582 NSD1Q96L73 2696 aaPredicted RBP6.01□□□□□ -1.45
LINC00488-201ENST00000494582 KRTAP13-1Q8IUC0 172 aa6.01□□□□□ -1.45
LINC00488-201ENST00000494582 FRAS1Q86XX4 4008 aa6□□□□□ -1.45
LINC00488-201ENST00000494582 NBEAL1Q6ZS30 2694 aa6□□□□□ -1.45
LINC00488-201ENST00000494582 A0A1B0GU69 56 aa6□□□□□ -1.45
LINC00488-201ENST00000494582 ACYP2P14621 99 aa6□□□□□ -1.45
LINC00488-201ENST00000494582 PANO1I0J062 215 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms