RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 Q9BRP9 147 aa10.64□□□□□ -0.71
SYP-208ENST00000494396 SERTAD4-AS1Q5TG53 156 aa10.63□□□□□ -0.71
SYP-208ENST00000494396 H3BPC8 53 aa10.62□□□□□ -0.71
SYP-208ENST00000494396 K7EQZ3 153 aa10.62□□□□□ -0.71
SYP-208ENST00000494396 MP68P56378 58 aa10.62□□□□□ -0.71
SYP-208ENST00000494396 PMAIP1Q13794 54 aa10.62□□□□□ -0.71
SYP-208ENST00000494396 TRAV22A0A0B4J277 110 aa10.61□□□□□ -0.71
SYP-208ENST00000494396 APLNQ9ULZ1 77 aa10.61□□□□□ -0.71
SYP-208ENST00000494396 NUPR2A6NF83 97 aa10.6□□□□□ -0.71
SYP-208ENST00000494396 SPANXA2-OT1Q8N9U9 137 aa10.6□□□□□ -0.71
SYP-208ENST00000494396 PSCAO43653 123 aa10.59□□□□□ -0.71
SYP-208ENST00000494396 UBE2DNLQ8IWF7 75 aa10.58□□□□□ -0.72
SYP-208ENST00000494396 PRKDCP78527 4128 aaKnown RBP10.57□□□□□ -0.72
SYP-208ENST00000494396 DNAH1Q9P2D7 4330 aa10.54□□□□□ -0.72
SYP-208ENST00000494396 IGLV8-61A0A075B6I0 122 aa10.54□□□□□ -0.72
SYP-208ENST00000494396 LRCOL1A6NCL2 159 aa10.54□□□□□ -0.72
SYP-208ENST00000494396 ST20-AS1Q8NBB2 130 aa10.54□□□□□ -0.72
SYP-208ENST00000494396 MRPL55Q7Z7F7 128 aaKnown RBP10.53□□□□□ -0.72
SYP-208ENST00000494396 LIMD2Q9BT23 127 aa10.53□□□□□ -0.72
SYP-208ENST00000494396 RPL37AP8A6NKH3 93 aa10.53□□□□□ -0.72
SYP-208ENST00000494396 TENM2Q9NT68 2774 aa10.52□□□□□ -0.73
SYP-208ENST00000494396 PSPHP1O15172 72 aa10.52□□□□□ -0.73
SYP-208ENST00000494396 LINC00476Q8WZB0 136 aa10.52□□□□□ -0.73
SYP-208ENST00000494396 CASC10Q5T4H9 136 aa10.51□□□□□ -0.73
SYP-208ENST00000494396 DYNC2H1Q8NCM8 4307 aaKnown RBP10.51□□□□□ -0.73
SYP-208ENST00000494396 UBE2BP63146 152 aa10.51□□□□□ -0.73
SYP-208ENST00000494396 CSMD3Q7Z407 3707 aa10.5□□□□□ -0.73
SYP-208ENST00000494396 KRTAP1-5Q9BYS1 174 aa10.49□□□□□ -0.73
SYP-208ENST00000494396 REG3GQ6UW15 175 aa10.48□□□□□ -0.73
SYP-208ENST00000494396 LYSTQ99698 3801 aa10.48□□□□□ -0.73
SYP-208ENST00000494396 KRTAP29-1A8MX34 341 aaPredicted RBP10.48□□□□□ -0.73
SYP-208ENST00000494396 UBE2AP49459 152 aa10.47□□□□□ -0.73
SYP-208ENST00000494396 IGFL1Q6UW32 110 aa10.47□□□□□ -0.73
SYP-208ENST00000494396 FBN3Q75N90 2809 aa10.47□□□□□ -0.73
SYP-208ENST00000494396 LINC00208Q96KT6 92 aa10.46□□□□□ -0.74
SYP-208ENST00000494396 A8MUN3 132 aa10.45□□□□□ -0.74
SYP-208ENST00000494396 Q5VV11 94 aa10.45□□□□□ -0.74
SYP-208ENST00000494396 FAM168BA1KXE4 195 aa10.44□□□□□ -0.74
SYP-208ENST00000494396 DNAH7Q8WXX0 4024 aa10.43□□□□□ -0.74
SYP-208ENST00000494396 WFDC13Q8IUB5 93 aa10.43□□□□□ -0.74
SYP-208ENST00000494396 KRTAP7-1Q8IUC3 87 aa10.43□□□□□ -0.74
SYP-208ENST00000494396 H0Y9P7 68 aa10.42□□□□□ -0.74
SYP-208ENST00000494396 PRR4Q16378 134 aa10.42□□□□□ -0.74
SYP-208ENST00000494396 NBDYA0A0U1RRE5 68 aa10.42□□□□□ -0.74
SYP-208ENST00000494396 Q8N9P0 234 aaPredicted RBP10.42□□□□□ -0.74
SYP-208ENST00000494396 CD164Q04900 197 aa10.41□□□□□ -0.74
SYP-208ENST00000494396 CASC2Q6XLA1 102 aa10.41□□□□□ -0.74
SYP-208ENST00000494396 PLECQ15149 4684 aaKnown RBP10.4□□□□□ -0.74
SYP-208ENST00000494396 A0A087WSZ3 146 aa10.4□□□□□ -0.75
SYP-208ENST00000494396 C9orf163Q8N9P6 203 aa10.38□□□□□ -0.75
SYP-208ENST00000494396 A8MWP4 228 aa10.37□□□□□ -0.75
SYP-208ENST00000494396 STARD9Q9P2P6 4700 aa10.36□□□□□ -0.75
SYP-208ENST00000494396 LOC101927531A0A1B0GV80 90 aa10.36□□□□□ -0.75
SYP-208ENST00000494396 Q75L30 129 aa10.36□□□□□ -0.75
SYP-208ENST00000494396 CHKB-CPT1BH3BT56 60 aa10.35□□□□□ -0.75
SYP-208ENST00000494396 DNAH10Q8IVF4 4471 aa10.35□□□□□ -0.75
SYP-208ENST00000494396 C14orf177Q52M58 125 aa10.34□□□□□ -0.75
SYP-208ENST00000494396 ATP11AUNQ6ZP68 121 aa10.34□□□□□ -0.75
SYP-208ENST00000494396 TGP01266 2768 aa10.34□□□□□ -0.75
SYP-208ENST00000494396 SPRR1BP22528 89 aa10.34□□□□□ -0.75
SYP-208ENST00000494396 IGLV7-46A0A075B6I9 117 aa10.32□□□□□ -0.76
SYP-208ENST00000494396 CNBPP62633 177 aaKnown RBP10.32□□□□□ -0.76
SYP-208ENST00000494396 H0Y9J4 135 aa10.32□□□□□ -0.76
SYP-208ENST00000494396 DEFB116Q30KQ4 102 aa10.31□□□□□ -0.76
SYP-208ENST00000494396 KTN1-AS1Q86SY8 53 aa10.31□□□□□ -0.76
SYP-208ENST00000494396 PRR15LQ9BU68 103 aa10.31□□□□□ -0.76
SYP-208ENST00000494396 LINC00472Q9H8W2 130 aa10.31□□□□□ -0.76
SYP-208ENST00000494396 Q6ZRN7 208 aaPredicted RBP10.29□□□□□ -0.76
SYP-208ENST00000494396 WWC2-AS2Q96NR7 200 aa10.29□□□□□ -0.76
SYP-208ENST00000494396 C16orf90A8MZG2 172 aa10.29□□□□□ -0.76
SYP-208ENST00000494396 TP53AIP1Q9HCN2 124 aa10.29□□□□□ -0.76
SYP-208ENST00000494396 VPS13DQ5THJ4 4388 aa10.28□□□□□ -0.76
SYP-208ENST00000494396 NDUFS5O43920 106 aa10.28□□□□□ -0.76
SYP-208ENST00000494396 RPL37AP61513 92 aaKnown RBP10.27□□□□□ -0.76
SYP-208ENST00000494396 COA5Q86WW8 74 aa10.27□□□□□ -0.77
SYP-208ENST00000494396 A0A0G2JQZ4 141 aa10.25□□□□□ -0.77
SYP-208ENST00000494396 A0A1W2PNN7 141 aa10.25□□□□□ -0.77
SYP-208ENST00000494396 PRLHP81277 87 aa10.25□□□□□ -0.77
SYP-208ENST00000494396 A0A096LNI7 61 aa10.24□□□□□ -0.77
SYP-208ENST00000494396 Q6ZR54 194 aa10.24□□□□□ -0.77
SYP-208ENST00000494396 PHF5AQ7RTV0 110 aaKnown RBP10.23□□□□□ -0.77
SYP-208ENST00000494396 CDC42SE1Q9NRR8 79 aa10.23□□□□□ -0.77
SYP-208ENST00000494396 MMP24-AS1A0A0U1RRL7 71 aa10.22□□□□□ -0.77
SYP-208ENST00000494396 A6NED7 52 aa10.22□□□□□ -0.77
SYP-208ENST00000494396 LY6G6CO95867 125 aa10.21□□□□□ -0.77
SYP-208ENST00000494396 LINC01558Q9Y6Z2 57 aa10.21□□□□□ -0.77
SYP-208ENST00000494396 IGKV2-24A0A0C4DH68 120 aa10.21□□□□□ -0.78
SYP-208ENST00000494396 MOBPQ13875 183 aa10.21□□□□□ -0.78
SYP-208ENST00000494396 ASB16-AS1Q495Z4 193 aa10.19□□□□□ -0.78
SYP-208ENST00000494396 LCA10Q71F78 164 aa10.19□□□□□ -0.78
SYP-208ENST00000494396 A8MU10 97 aa10.18□□□□□ -0.78
SYP-208ENST00000494396 PLAC8Q9NZF1 115 aa10.18□□□□□ -0.78
SYP-208ENST00000494396 A0A087WTM6 91 aa10.17□□□□□ -0.78
SYP-208ENST00000494396 C1orf134Q5TEV5 83 aa10.16□□□□□ -0.78
SYP-208ENST00000494396 A6NN06 94 aa10.16□□□□□ -0.78
SYP-208ENST00000494396 SPTSSBQ8NFR3 76 aa10.16□□□□□ -0.78
SYP-208ENST00000494396 CHTF8P0CG12 524 aa10.13□□□□□ -0.79
SYP-208ENST00000494396 KMT2AQ03164 3969 aa10.11□□□□□ -0.79
SYP-208ENST00000494396 RBM12B-AS1Q9P1G2 102 aa10.1□□□□□ -0.79
SYP-208ENST00000494396 C7orf65Q6ZTY9 151 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms