RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 COX6CP09669 75 aa7.21□□□□□ -1.26
TRA2A-209ENST00000494255 SPINK1P00995 79 aa7.2□□□□□ -1.26
TRA2A-209ENST00000494255 A0A1B0GX51 115 aa7.19□□□□□ -1.26
TRA2A-209ENST00000494255 F8WEM9 126 aa7.19□□□□□ -1.26
TRA2A-209ENST00000494255 SMIM29Q86T20 159 aa7.19□□□□□ -1.26
TRA2A-209ENST00000494255 FAM218AQ96MZ4 157 aa7.19□□□□□ -1.26
TRA2A-209ENST00000494255 PRR4Q16378 134 aa7.19□□□□□ -1.26
TRA2A-209ENST00000494255 OCIAD2Q56VL3 154 aa7.19□□□□□ -1.26
TRA2A-209ENST00000494255 PPDPFLQ8WWR9 84 aa7.19□□□□□ -1.26
TRA2A-209ENST00000494255 CLEC2BQ92478 149 aa7.17□□□□□ -1.26
TRA2A-209ENST00000494255 GHRHP01286 108 aa7.16□□□□□ -1.26
TRA2A-209ENST00000494255 SNHG12Q9BXW3 62 aa7.16□□□□□ -1.26
TRA2A-209ENST00000494255 SCGB1C2P0DMR2 95 aa7.16□□□□□ -1.26
TRA2A-209ENST00000494255 RPS29P62273 56 aaKnown RBP7.16□□□□□ -1.26
TRA2A-209ENST00000494255 LOC100996750A0A140TA64 210 aa7.15□□□□□ -1.27
TRA2A-209ENST00000494255 DNAL4O96015 105 aa7.15□□□□□ -1.27
TRA2A-209ENST00000494255 RETNLBQ9BQ08 111 aa7.15□□□□□ -1.27
TRA2A-209ENST00000494255 KRTAP4-6Q9BYQ5 205 aa7.15□□□□□ -1.27
TRA2A-209ENST00000494255 BATFQ16520 125 aa7.14□□□□□ -1.27
TRA2A-209ENST00000494255 HRCT1Q6UXD1 115 aa7.14□□□□□ -1.27
TRA2A-209ENST00000494255 CD164Q04900 197 aa7.12□□□□□ -1.27
TRA2A-209ENST00000494255 Q6JHZ5 121 aa7.12□□□□□ -1.27
TRA2A-209ENST00000494255 LIMD2Q9BT23 127 aa7.12□□□□□ -1.27
TRA2A-209ENST00000494255 H3BQ85 93 aa7.11□□□□□ -1.27
TRA2A-209ENST00000494255 LCE2BO14633 110 aa7.11□□□□□ -1.27
TRA2A-209ENST00000494255 FABP2P12104 132 aa7.11□□□□□ -1.27
TRA2A-209ENST00000494255 ORMDL1Q9P0S3 153 aa7.11□□□□□ -1.27
TRA2A-209ENST00000494255 IGLV8-61A0A075B6I0 122 aa7.1□□□□□ -1.27
TRA2A-209ENST00000494255 A0A0G2JQZ4 141 aa7.09□□□□□ -1.27
TRA2A-209ENST00000494255 NDUFV3P56181 108 aaKnown RBP7.09□□□□□ -1.27
TRA2A-209ENST00000494255 IGLV7-46A0A075B6I9 117 aa7.09□□□□□ -1.27
TRA2A-209ENST00000494255 TRACP01848 142 aa7.09□□□□□ -1.27
TRA2A-209ENST00000494255 FP248Q71RG6 208 aaPredicted RBP7.09□□□□□ -1.27
TRA2A-209ENST00000494255 NAA38Q9BRA0 125 aaKnown RBP7.09□□□□□ -1.27
TRA2A-209ENST00000494255 HMCN2Q8NDA2 5059 aa7.08□□□□□ -1.28
TRA2A-209ENST00000494255 LST1O00453 97 aa7.08□□□□□ -1.28
TRA2A-209ENST00000494255 H3BUT2 72 aa7.07□□□□□ -1.28
TRA2A-209ENST00000494255 LYRM7Q5U5X0 104 aa7.07□□□□□ -1.28
TRA2A-209ENST00000494255 IGFL1Q6UW32 110 aa7.07□□□□□ -1.28
TRA2A-209ENST00000494255 TMEM256-PLSCR3K7ERE1 68 aa7.06□□□□□ -1.28
TRA2A-209ENST00000494255 H3BMG7 143 aa7.06□□□□□ -1.28
TRA2A-209ENST00000494255 ATXN8Q156A1 80 aa7.05□□□□□ -1.28
TRA2A-209ENST00000494255 TCL1BO95988 128 aa7.03□□□□□ -1.28
TRA2A-209ENST00000494255 Q5XG85 94 aa7.03□□□□□ -1.28
TRA2A-209ENST00000494255 TRBV7-7A0A0K0K1E9 115 aa7.02□□□□□ -1.29
TRA2A-209ENST00000494255 UBE2V1Q13404 147 aa7.02□□□□□ -1.29
TRA2A-209ENST00000494255 TPRXLQ17RH7 258 aa7.02□□□□□ -1.29
TRA2A-209ENST00000494255 C9orf118A6NHY6 69 aa7.01□□□□□ -1.29
TRA2A-209ENST00000494255 BAALC-AS2P0C853 105 aa7.01□□□□□ -1.29
TRA2A-209ENST00000494255 TRBV20-1A0A075B6N2 111 aa7□□□□□ -1.29
TRA2A-209ENST00000494255 TAX1BP3O14907 124 aa7□□□□□ -1.29
TRA2A-209ENST00000494255 A0A1B0GV72 72 aa7□□□□□ -1.29
TRA2A-209ENST00000494255 TEN1Q86WV5 123 aa7□□□□□ -1.29
TRA2A-209ENST00000494255 CDIP1Q9H305 208 aa7□□□□□ -1.29
TRA2A-209ENST00000494255 Q6Q795 121 aa6.99□□□□□ -1.29
TRA2A-209ENST00000494255 ANKRD29Q8N6D5 301 aa6.99□□□□□ -1.29
TRA2A-209ENST00000494255 A0A1W2PPM0 123 aa6.97□□□□□ -1.29
TRA2A-209ENST00000494255 PCP4L1A6NKN8 68 aa6.97□□□□□ -1.29
TRA2A-209ENST00000494255 COL5A1-AS1Q5SY13 56 aa6.97□□□□□ -1.29
TRA2A-209ENST00000494255 C1orf195Q5TG92 126 aa6.97□□□□□ -1.29
TRA2A-209ENST00000494255 KRTAP13-3Q3SY46 172 aa6.96□□□□□ -1.29
TRA2A-209ENST00000494255 SS18L2Q9UHA2 77 aa6.96□□□□□ -1.29
TRA2A-209ENST00000494255 ASB16-AS1Q495Z4 193 aa6.96□□□□□ -1.3
TRA2A-209ENST00000494255 C9JAW5 83 aa6.95□□□□□ -1.3
TRA2A-209ENST00000494255 RBM3P98179 157 aaKnown RBP6.95□□□□□ -1.3
TRA2A-209ENST00000494255 A0A1W2PNM2 257 aa6.93□□□□□ -1.3
TRA2A-209ENST00000494255 DSCR8Q96T75 97 aa6.93□□□□□ -1.3
TRA2A-209ENST00000494255 LRP2P98164 4655 aa6.93□□□□□ -1.3
TRA2A-209ENST00000494255 A0A087WSZ3 146 aa6.93□□□□□ -1.3
TRA2A-209ENST00000494255 TRBV7-4A0A0J9YYF1 115 aa6.93□□□□□ -1.3
TRA2A-209ENST00000494255 CCKP06307 115 aa6.93□□□□□ -1.3
TRA2A-209ENST00000494255 LPAP08519 4548 aa6.91□□□□□ -1.3
TRA2A-209ENST00000494255 JMJD7-PLA2G4BH0Y9G9 81 aa6.91□□□□□ -1.3
TRA2A-209ENST00000494255 VPS25Q9BRG1 176 aa6.9□□□□□ -1.3
TRA2A-209ENST00000494255 SPCS1Q9Y6A9 102 aa6.9□□□□□ -1.3
TRA2A-209ENST00000494255 H3BT86 120 aa6.89□□□□□ -1.31
TRA2A-209ENST00000494255 C9orf92A6NGG3 77 aa6.88□□□□□ -1.31
TRA2A-209ENST00000494255 PDE6GP18545 87 aa6.86□□□□□ -1.31
TRA2A-209ENST00000494255 MTURNQ8N3F0 131 aa6.86□□□□□ -1.31
TRA2A-209ENST00000494255 LOC110117498A0A087WWA1 95 aa6.85□□□□□ -1.31
TRA2A-209ENST00000494255 C21orf62-AS1Q17RA5 79 aa6.85□□□□□ -1.31
TRA2A-209ENST00000494255 XP32Q5T750 250 aa6.85□□□□□ -1.31
TRA2A-209ENST00000494255 Q6ZQT0 140 aa6.84□□□□□ -1.31
TRA2A-209ENST00000494255 C14orf132Q9NPU4 83 aa6.84□□□□□ -1.31
TRA2A-209ENST00000494255 UBR4Q5T4S7 5183 aa6.84□□□□□ -1.31
TRA2A-209ENST00000494255 OBSCN-AS1Q96MR7 158 aa6.84□□□□□ -1.32
TRA2A-209ENST00000494255 K7EP34 96 aa6.83□□□□□ -1.32
TRA2A-209ENST00000494255 Q96NJ1 140 aa6.83□□□□□ -1.32
TRA2A-209ENST00000494255 SEC61BP60468 96 aaKnown RBP6.82□□□□□ -1.32
TRA2A-209ENST00000494255 SIGMAR1Q99720 223 aa6.82□□□□□ -1.32
TRA2A-209ENST00000494255 LCE2AQ5TA79 106 aaPredicted RBP6.81□□□□□ -1.32
TRA2A-209ENST00000494255 GTF2H5Q6ZYL4 71 aa6.81□□□□□ -1.32
TRA2A-209ENST00000494255 A0A1B0GW54 56 aa6.8□□□□□ -1.32
TRA2A-209ENST00000494255 IGKV4-1P06312 121 aa6.8□□□□□ -1.32
TRA2A-209ENST00000494255 LINC00472Q9H8W2 130 aa6.78□□□□□ -1.32
TRA2A-209ENST00000494255 SMCPP49901 116 aaPredicted RBP6.77□□□□□ -1.33
TRA2A-209ENST00000494255 DEFB116Q30KQ4 102 aa6.77□□□□□ -1.33
TRA2A-209ENST00000494255 PRO0461Q9UI25 63 aa6.76□□□□□ -1.33
TRA2A-209ENST00000494255 J3KT08 172 aa6.74□□□□□ -1.33
TRA2A-209ENST00000494255 RPL37P61927 97 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms