RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 PRLHP81277 87 aa0.71□□□□□ -2.3
PTPN12-212ENST00000494248 DEFB106AQ8N104 65 aa0.71□□□□□ -2.3
PTPN12-212ENST00000494248 AHCTF1Q8WYP5 2266 aa0.71□□□□□ -2.3
PTPN12-212ENST00000494248 CNOT1A5YKK6 2376 aaKnown RBP0.7□□□□□ -2.3
PTPN12-212ENST00000494248 LINC01590Q5TEZ4 76 aa0.7□□□□□ -2.3
PTPN12-212ENST00000494248 ASH1LQ9NR48 2969 aaKnown RBP0.7□□□□□ -2.3
PTPN12-212ENST00000494248 NAV3Q8IVL0 2385 aa0.69□□□□□ -2.3
PTPN12-212ENST00000494248 NOP10Q9NPE3 64 aaKnown RBP0.69□□□□□ -2.3
PTPN12-212ENST00000494248 ZDBF2Q9HCK1 2354 aa0.69□□□□□ -2.3
PTPN12-212ENST00000494248 RP1L1Q8IWN7 2480 aaPredicted RBP0.68□□□□□ -2.3
PTPN12-212ENST00000494248 TTTY10Q9BZA0 68 aa0.68□□□□□ -2.3
PTPN12-212ENST00000494248 SORL1Q92673 2214 aa0.68□□□□□ -2.3
PTPN12-212ENST00000494248 M0QY20 66 aa0.67□□□□□ -2.3
PTPN12-212ENST00000494248 CLPSL2Q6UWE3 100 aa0.67□□□□□ -2.3
PTPN12-212ENST00000494248 LEAP2Q969E1 77 aa0.67□□□□□ -2.3
PTPN12-212ENST00000494248 COL6A6A6NMZ7 2263 aa0.67□□□□□ -2.3
PTPN12-212ENST00000494248 REV3LO60673 3130 aa0.67□□□□□ -2.3
PTPN12-212ENST00000494248 A8MTW9 85 aa0.66□□□□□ -2.3
PTPN12-212ENST00000494248 PRCDQ00LT1 54 aa0.66□□□□□ -2.3
PTPN12-212ENST00000494248 PTPRZ1P23471 2315 aaPredicted RBP0.65□□□□□ -2.3
PTPN12-212ENST00000494248 PTPRQQ9UMZ3 2332 aa0.65□□□□□ -2.3
PTPN12-212ENST00000494248 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.31
PTPN12-212ENST00000494248 MEGF8Q7Z7M0 2845 aa0.65□□□□□ -2.31
PTPN12-212ENST00000494248 USF3Q68DE3 2245 aa0.64□□□□□ -2.31
PTPN12-212ENST00000494248 WNK2Q9Y3S1 2297 aa0.63□□□□□ -2.31
PTPN12-212ENST00000494248 ZNF462Q96JM2 2506 aa0.63□□□□□ -2.31
PTPN12-212ENST00000494248 SPINK1P00995 79 aa0.63□□□□□ -2.31
PTPN12-212ENST00000494248 TOMM7Q9P0U1 55 aa0.63□□□□□ -2.31
PTPN12-212ENST00000494248 H0YGG7 62 aa0.62□□□□□ -2.31
PTPN12-212ENST00000494248 H3BSH0 61 aa0.62□□□□□ -2.31
PTPN12-212ENST00000494248 ROS1P08922 2347 aa0.62□□□□□ -2.31
PTPN12-212ENST00000494248 DOPEY2Q9Y3R5 2298 aa0.62□□□□□ -2.31
PTPN12-212ENST00000494248 M0QZ58 72 aa0.61□□□□□ -2.31
PTPN12-212ENST00000494248 DEFB135Q30KP9 77 aa0.61□□□□□ -2.31
PTPN12-212ENST00000494248 A0A0C4DFX4 3053 aa0.61□□□□□ -2.31
PTPN12-212ENST00000494248 PCNX1Q96RV3 2341 aa0.6□□□□□ -2.31
PTPN12-212ENST00000494248 K7EIM0 57 aa0.6□□□□□ -2.31
PTPN12-212ENST00000494248 SPINK6Q6UWN8 80 aa0.6□□□□□ -2.31
PTPN12-212ENST00000494248 SMR3AQ99954 134 aa0.6□□□□□ -2.31
PTPN12-212ENST00000494248 MYCBP2O75592 4640 aa0.6□□□□□ -2.31
PTPN12-212ENST00000494248 C2CD3Q4AC94 2353 aa0.59□□□□□ -2.31
PTPN12-212ENST00000494248 M0R2T5 61 aa0.59□□□□□ -2.31
PTPN12-212ENST00000494248 CSMD3Q7Z407 3707 aa0.59□□□□□ -2.32
PTPN12-212ENST00000494248 PLCE1Q9P212 2302 aa0.58□□□□□ -2.32
PTPN12-212ENST00000494248 DSPP15924 2871 aaKnown RBP0.58□□□□□ -2.32
PTPN12-212ENST00000494248 TMEM167AQ8TBQ9 72 aa0.58□□□□□ -2.32
PTPN12-212ENST00000494248 TPRP12270 2363 aaKnown RBP0.58□□□□□ -2.32
PTPN12-212ENST00000494248 TRANK1O15050 2925 aa0.58□□□□□ -2.32
PTPN12-212ENST00000494248 MUC5BQ9HC84 5762 aaPredicted RBP0.58□□□□□ -2.32
PTPN12-212ENST00000494248 TTC28Q96AY4 2481 aa0.57□□□□□ -2.32
PTPN12-212ENST00000494248 KRTAP2-3P0C7H8 128 aa0.57□□□□□ -2.32
PTPN12-212ENST00000494248 KRTAP2-4Q9BYR9 128 aa0.57□□□□□ -2.32
PTPN12-212ENST00000494248 KRTAP2-1Q9BYU5 128 aa0.57□□□□□ -2.32
PTPN12-212ENST00000494248 TENM4Q6N022 2769 aa0.57□□□□□ -2.32
PTPN12-212ENST00000494248 CHD9Q3L8U1 2897 aa0.56□□□□□ -2.32
PTPN12-212ENST00000494248 IGF2RP11717 2491 aa0.56□□□□□ -2.32
PTPN12-212ENST00000494248 CELSR1Q9NYQ6 3014 aa0.56□□□□□ -2.32
PTPN12-212ENST00000494248 PKDREJQ9NTG1 2253 aa0.56□□□□□ -2.32
PTPN12-212ENST00000494248 C9orf92A6NGG3 77 aa0.56□□□□□ -2.32
PTPN12-212ENST00000494248 DEFB104AQ8WTQ1 72 aa0.56□□□□□ -2.32
PTPN12-212ENST00000494248 SPTBN2O15020 2390 aa0.56□□□□□ -2.32
PTPN12-212ENST00000494248 CELSR2Q9HCU4 2923 aa0.55□□□□□ -2.32
PTPN12-212ENST00000494248 GPR98Q8WXG9 6306 aa0.55□□□□□ -2.32
PTPN12-212ENST00000494248 CACNA1HO95180 2353 aa0.55□□□□□ -2.32
PTPN12-212ENST00000494248 ZNF292O60281 2723 aa0.54□□□□□ -2.32
PTPN12-212ENST00000494248 PRRC2CQ9Y520 2896 aaKnown RBP0.54□□□□□ -2.32
PTPN12-212ENST00000494248 TNP1P09430 55 aa0.54□□□□□ -2.32
PTPN12-212ENST00000494248 U3KQA8 63 aa0.54□□□□□ -2.32
PTPN12-212ENST00000494248 ANK2Q01484 3957 aa0.54□□□□□ -2.32
PTPN12-212ENST00000494248 TENM3Q9P273 2699 aa0.54□□□□□ -2.32
PTPN12-212ENST00000494248 DNAH11Q96DT5 4516 aa0.54□□□□□ -2.32
PTPN12-212ENST00000494248 VPS13DQ5THJ4 4388 aa0.53□□□□□ -2.32
PTPN12-212ENST00000494248 SPTBN1Q01082 2364 aaKnown RBP0.53□□□□□ -2.32
PTPN12-212ENST00000494248 ABCA2Q9BZC7 2435 aa0.53□□□□□ -2.32
PTPN12-212ENST00000494248 KRTAP19-3Q7Z4W3 81 aa0.53□□□□□ -2.32
PTPN12-212ENST00000494248 PDE4DIPQ5VU43 2346 aa0.53□□□□□ -2.33
PTPN12-212ENST00000494248 POLQO75417 2590 aa0.52□□□□□ -2.33
PTPN12-212ENST00000494248 SACSQ9NZJ4 4579 aa0.52□□□□□ -2.33
PTPN12-212ENST00000494248 KNL1Q8NG31 2342 aa0.52□□□□□ -2.33
PTPN12-212ENST00000494248 AKAP13Q12802 2813 aa0.52□□□□□ -2.33
PTPN12-212ENST00000494248 F8P00451 2351 aa0.52□□□□□ -2.33
PTPN12-212ENST00000494248 PRM1P04553 51 aa0.51□□□□□ -2.33
PTPN12-212ENST00000494248 RPL39P5Q59GN2 51 aa0.51□□□□□ -2.33
PTPN12-212ENST00000494248 FAT2Q9NYQ8 4349 aa0.5□□□□□ -2.33
PTPN12-212ENST00000494248 VWFP04275 2813 aa0.5□□□□□ -2.33
PTPN12-212ENST00000494248 H3BNG1 76 aa0.5□□□□□ -2.33
PTPN12-212ENST00000494248 CSPG4Q6UVK1 2322 aa0.5□□□□□ -2.33
PTPN12-212ENST00000494248 FBN2P35556 2912 aa0.5□□□□□ -2.33
PTPN12-212ENST00000494248 BSNQ9UPA5 3926 aa0.49□□□□□ -2.33
PTPN12-212ENST00000494248 OTOGQ6ZRI0 2925 aa0.49□□□□□ -2.33
PTPN12-212ENST00000494248 PRKDCP78527 4128 aaKnown RBP0.49□□□□□ -2.33
PTPN12-212ENST00000494248 SRCAPQ6ZRS2 3230 aa0.49□□□□□ -2.33
PTPN12-212ENST00000494248 ABCA12Q86UK0 2595 aa0.49□□□□□ -2.33
PTPN12-212ENST00000494248 SPART-AS1P0CW21 52 aa0.49□□□□□ -2.33
PTPN12-212ENST00000494248 TNXBP22105 4242 aa0.49□□□□□ -2.33
PTPN12-212ENST00000494248 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
PTPN12-212ENST00000494248 GVINP1Q7Z2Y8 2422 aa0.48□□□□□ -2.33
PTPN12-212ENST00000494248 KMT2AQ03164 3969 aa0.48□□□□□ -2.33
PTPN12-212ENST00000494248 HELZ2Q9BYK8 2649 aaKnown RBP0.48□□□□□ -2.33
PTPN12-212ENST00000494248 DEFB108AA8MXU0 73 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms