RNA–Protein interactions for RNA: ENST00000494044.1

LPP-218, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5

Gene LPP, Length 300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-218ENST00000494044 TACC2O95359 2948 aa-0.27□□□□□ -2.45
LPP-218ENST00000494044 PTPN23Q9H3S7 1636 aa-0.27□□□□□ -2.45
LPP-218ENST00000494044 KDM5DQ9BY66 1539 aa-0.28□□□□□ -2.45
LPP-218ENST00000494044 MTORP42345 2549 aa-0.28□□□□□ -2.45
LPP-218ENST00000494044 AKAP13Q12802 2813 aa-0.28□□□□□ -2.45
LPP-218ENST00000494044 H3BNG1 76 aa-0.28□□□□□ -2.45
LPP-218ENST00000494044 HMGA1P17096 107 aaKnown RBP-0.28□□□□□ -2.45
LPP-218ENST00000494044 IFI27P40305 119 aaPredicted RBP-0.28□□□□□ -2.45
LPP-218ENST00000494044 TIAM2Q8IVF5 1701 aa-0.28□□□□□ -2.45
LPP-218ENST00000494044 TEP1Q99973 2627 aaKnown RBP-0.28□□□□□ -2.45
LPP-218ENST00000494044 CEP290O15078 2479 aa-0.28□□□□□ -2.45
LPP-218ENST00000494044 PCLOQ9Y6V0 5065 aa-0.28□□□□□ -2.45
LPP-218ENST00000494044 FLGP20930 4061 aaPredicted RBP-0.29□□□□□ -2.46
LPP-218ENST00000494044 PRRC2CQ9Y520 2896 aaKnown RBP-0.29□□□□□ -2.46
LPP-218ENST00000494044 C3orf79P0CE67 100 aa-0.29□□□□□ -2.46
LPP-218ENST00000494044 C18orf32Q8TCD1 76 aa-0.29□□□□□ -2.46
LPP-218ENST00000494044 PKHD1P08F94 4074 aa-0.29□□□□□ -2.46
LPP-218ENST00000494044 ADAMTS12P58397 1594 aa-0.29□□□□□ -2.46
LPP-218ENST00000494044 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.3□□□□□ -2.46
LPP-218ENST00000494044 MGAM2Q2M2H8 2515 aa-0.3□□□□□ -2.46
LPP-218ENST00000494044 TNRC18O15417 2968 aaPredicted RBP-0.3□□□□□ -2.46
LPP-218ENST00000494044 SMIM13P0DJ93 91 aa-0.3□□□□□ -2.46
LPP-218ENST00000494044 ZZEF1O43149 2961 aa-0.3□□□□□ -2.46
LPP-218ENST00000494044 HERC1Q15751 4861 aa-0.31□□□□□ -2.46
LPP-218ENST00000494044 ARFGEF2Q9Y6D5 1785 aa-0.31□□□□□ -2.46
LPP-218ENST00000494044 FAT1Q14517 4588 aa-0.31□□□□□ -2.46
LPP-218ENST00000494044 GCN1Q92616 2671 aaKnown RBP-0.31□□□□□ -2.46
LPP-218ENST00000494044 NREPQ16612 68 aa-0.31□□□□□ -2.46
LPP-218ENST00000494044 SPRR2FQ96RM1 72 aa-0.31□□□□□ -2.46
LPP-218ENST00000494044 HTTP42858 3142 aa-0.31□□□□□ -2.46
LPP-218ENST00000494044 KMT2CQ8NEZ4 4911 aaKnown RBP-0.31□□□□□ -2.46
LPP-218ENST00000494044 NIPBLQ6KC79 2804 aaeCLIP-0.31□□□□□ -2.46
LPP-218ENST00000494044 ANKRD50Q9ULJ7 1429 aa-0.31□□□□□ -2.46
LPP-218ENST00000494044 CFAP74Q9C0B2 1584 aa-0.32□□□□□ -2.46
LPP-218ENST00000494044 DMXL1Q9Y485 3027 aa-0.32□□□□□ -2.46
LPP-218ENST00000494044 WIZO95785 1651 aa-0.32□□□□□ -2.46
LPP-218ENST00000494044 PRO3102Q9H379 93 aa-0.32□□□□□ -2.46
LPP-218ENST00000494044 ANKRD11Q6UB99 2663 aaPredicted RBP-0.32□□□□□ -2.46
LPP-218ENST00000494044 C4AP0C0L4 1744 aa-0.33□□□□□ -2.46
LPP-218ENST00000494044 C4BP0C0L5 1744 aa-0.33□□□□□ -2.46
LPP-218ENST00000494044 UTP20O75691 2785 aaKnown RBP-0.33□□□□□ -2.46
LPP-218ENST00000494044 CD163L1Q9NR16 1453 aa-0.33□□□□□ -2.46
LPP-218ENST00000494044 STARD9Q9P2P6 4700 aa-0.33□□□□□ -2.46
LPP-218ENST00000494044 SCN11AQ9UI33 1791 aa-0.33□□□□□ -2.46
LPP-218ENST00000494044 ACACBO00763 2458 aa-0.33□□□□□ -2.46
LPP-218ENST00000494044 LAMA1P25391 3075 aa-0.34□□□□□ -2.46
LPP-218ENST00000494044 NESP48681 1621 aa-0.34□□□□□ -2.46
LPP-218ENST00000494044 HERC2O95714 4834 aa-0.34□□□□□ -2.46
LPP-218ENST00000494044 USH2AO75445 5202 aa-0.34□□□□□ -2.46
LPP-218ENST00000494044 A0A087WXM4 84 aa-0.34□□□□□ -2.46
LPP-218ENST00000494044 A0A0C4DFX4 3053 aa-0.34□□□□□ -2.46
LPP-218ENST00000494044 NDUFA4O00483 81 aa-0.34□□□□□ -2.46
LPP-218ENST00000494044 DEFA5Q01523 94 aa-0.34□□□□□ -2.46
LPP-218ENST00000494044 NBEAL2Q6ZNJ1 2754 aa-0.34□□□□□ -2.46
LPP-218ENST00000494044 TEX15Q9BXT5 2789 aa-0.34□□□□□ -2.46
LPP-218ENST00000494044 RRBP1Q9P2E9 1410 aaKnown RBP-0.34□□□□□ -2.46
LPP-218ENST00000494044 USP9XQ93008 2570 aaPredicted RBP-0.34□□□□□ -2.46
LPP-218ENST00000494044 SCRIBQ14160 1630 aa-0.35□□□□□ -2.46
LPP-218ENST00000494044 KALRNO60229 2985 aa-0.35□□□□□ -2.47
LPP-218ENST00000494044 PKD1P98161 4303 aa-0.35□□□□□ -2.47
LPP-218ENST00000494044 TLN2Q9Y4G6 2542 aa-0.35□□□□□ -2.47
LPP-218ENST00000494044 NBPF19A0A087WUL8 3843 aa-0.35□□□□□ -2.47
LPP-218ENST00000494044 MT1AP04731 61 aa-0.35□□□□□ -2.47
LPP-218ENST00000494044 DEFB110Q30KQ9 67 aa-0.35□□□□□ -2.47
LPP-218ENST00000494044 CUBNO60494 3623 aa-0.35□□□□□ -2.47
LPP-218ENST00000494044 NBEAQ8NFP9 2946 aa-0.35□□□□□ -2.47
LPP-218ENST00000494044 C9orf92A6NGG3 77 aa-0.36□□□□□ -2.47
LPP-218ENST00000494044 H0YAA0 97 aa-0.36□□□□□ -2.47
LPP-218ENST00000494044 LINC00158P58513 81 aa-0.36□□□□□ -2.47
LPP-218ENST00000494044 S4R3F8 94 aa-0.36□□□□□ -2.47
LPP-218ENST00000494044 DNAH6Q9C0G6 4158 aa-0.36□□□□□ -2.47
LPP-218ENST00000494044 LAMA2P24043 3122 aaKnown RBP-0.36□□□□□ -2.47
LPP-218ENST00000494044 PLXNC1O60486 1568 aa-0.36□□□□□ -2.47
LPP-218ENST00000494044 UBR4Q5T4S7 5183 aa-0.36□□□□□ -2.47
LPP-218ENST00000494044 SPTAN1Q13813 2472 aaKnown RBP-0.37□□□□□ -2.47
LPP-218ENST00000494044 ANKARQ7Z5J8 1434 aa-0.37□□□□□ -2.47
LPP-218ENST00000494044 MUC17Q685J3 4493 aa-0.37□□□□□ -2.47
LPP-218ENST00000494044 WDR87Q6ZQQ6 2873 aa-0.37□□□□□ -2.47
LPP-218ENST00000494044 ANKRD36CQ5JPF3 1778 aa-0.37□□□□□ -2.47
LPP-218ENST00000494044 NEBP20929 6669 aa-0.37□□□□□ -2.47
LPP-218ENST00000494044 VPS13DQ5THJ4 4388 aa-0.38□□□□□ -2.47
LPP-218ENST00000494044 MAP3K1Q13233 1512 aa-0.38□□□□□ -2.47
LPP-218ENST00000494044 DSPP15924 2871 aaKnown RBP-0.38□□□□□ -2.47
LPP-218ENST00000494044 DNAH3Q8TD57 4116 aa-0.38□□□□□ -2.47
LPP-218ENST00000494044 MYO9AB2RTY4 2548 aa-0.38□□□□□ -2.47
LPP-218ENST00000494044 DEFB1P60022 68 aa-0.38□□□□□ -2.47
LPP-218ENST00000494044 PKHD1L1Q86WI1 4243 aa-0.38□□□□□ -2.47
LPP-218ENST00000494044 AKAP9Q99996 3911 aa-0.38□□□□□ -2.47
LPP-218ENST00000494044 DNAH9Q9NYC9 4486 aa-0.38□□□□□ -2.47
LPP-218ENST00000494044 LAMA3Q16787 3333 aa-0.39□□□□□ -2.47
LPP-218ENST00000494044 DEFB106AQ8N104 65 aa-0.39□□□□□ -2.47
LPP-218ENST00000494044 LYSTQ99698 3801 aa-0.39□□□□□ -2.47
LPP-218ENST00000494044 LYNX1G3V0Z9 82 aa-0.4□□□□□ -2.47
LPP-218ENST00000494044 C5orf42Q9H799 3197 aa-0.4□□□□□ -2.47
LPP-218ENST00000494044 SRCAPQ6ZRS2 3230 aa-0.41□□□□□ -2.47
LPP-218ENST00000494044 FAT3Q8TDW7 4589 aa-0.41□□□□□ -2.48
LPP-218ENST00000494044 MT1HP80294 61 aa-0.41□□□□□ -2.48
LPP-218ENST00000494044 PRLHP81277 87 aa-0.41□□□□□ -2.48
LPP-218ENST00000494044 DNAH11Q96DT5 4516 aa-0.41□□□□□ -2.48
LPP-218ENST00000494044 CEP295Q9C0D2 2601 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms