RNA–Protein interactions for RNA: ENST00000493664.5

ZIC4-215, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 2,965 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-215ENST00000493664 DNAH9Q9NYC9 4486 aa8.95□□□□□ -0.98
ZIC4-215ENST00000493664 TENM2Q9NT68 2774 aa8.94□□□□□ -0.98
ZIC4-215ENST00000493664 IGKV2-24A0A0C4DH68 120 aa8.94□□□□□ -0.98
ZIC4-215ENST00000493664 KTN1-AS1Q86SY8 53 aa8.94□□□□□ -0.98
ZIC4-215ENST00000493664 STAB2Q8WWQ8 2551 aa8.93□□□□□ -0.98
ZIC4-215ENST00000493664 REG3GQ6UW15 175 aa8.93□□□□□ -0.98
ZIC4-215ENST00000493664 SPRR4Q96PI1 79 aa8.93□□□□□ -0.98
ZIC4-215ENST00000493664 PRLHP81277 87 aa8.93□□□□□ -0.98
ZIC4-215ENST00000493664 LINC00476Q8WZB0 136 aa8.93□□□□□ -0.98
ZIC4-215ENST00000493664 MGAM2Q2M2H8 2515 aa8.91□□□□□ -0.98
ZIC4-215ENST00000493664 H3BS24 57 aa8.9□□□□□ -0.99
ZIC4-215ENST00000493664 COL7A1Q02388 2944 aa8.89□□□□□ -0.99
ZIC4-215ENST00000493664 A0A1B0GW54 56 aa8.89□□□□□ -0.99
ZIC4-215ENST00000493664 A0A096LNI7 61 aa8.89□□□□□ -0.99
ZIC4-215ENST00000493664 IGFL1Q6UW32 110 aa8.88□□□□□ -0.99
ZIC4-215ENST00000493664 Q1T7F1 81 aa8.88□□□□□ -0.99
ZIC4-215ENST00000493664 LRCOL1A6NCL2 159 aa8.87□□□□□ -0.99
ZIC4-215ENST00000493664 PSPHP1O15172 72 aa8.87□□□□□ -0.99
ZIC4-215ENST00000493664 PSCAO43653 123 aa8.87□□□□□ -0.99
ZIC4-215ENST00000493664 KRTAP1-5Q9BYS1 174 aa8.87□□□□□ -0.99
ZIC4-215ENST00000493664 A0A087WSZ3 146 aa8.85□□□□□ -0.99
ZIC4-215ENST00000493664 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.85□□□□□ -0.99
ZIC4-215ENST00000493664 WFDC13Q8IUB5 93 aa8.85□□□□□ -0.99
ZIC4-215ENST00000493664 DNAH7Q8WXX0 4024 aa8.84□□□□□ -0.99
ZIC4-215ENST00000493664 HCG22E2RYF7 251 aa8.84□□□□□ -0.99
ZIC4-215ENST00000493664 PRR4Q16378 134 aa8.84□□□□□ -0.99
ZIC4-215ENST00000493664 LCE6AA0A183 80 aa8.84□□□□□ -0.99
ZIC4-215ENST00000493664 RPL37AP61513 92 aaKnown RBP8.84□□□□□ -0.99
ZIC4-215ENST00000493664 CHTF8P0CG12 524 aa8.82□□□□□ -1
ZIC4-215ENST00000493664 KRTAP11-1Q8IUC1 163 aa8.82□□□□□ -1
ZIC4-215ENST00000493664 MDFIQ99750 246 aa8.82□□□□□ -1
ZIC4-215ENST00000493664 hDV103S1A0JD37 113 aa8.81□□□□□ -1
ZIC4-215ENST00000493664 C16orf90A8MZG2 172 aa8.8□□□□□ -1
ZIC4-215ENST00000493664 K7EIL1 84 aa8.8□□□□□ -1
ZIC4-215ENST00000493664 ZCCHC13Q8WW36 166 aaKnown RBP8.8□□□□□ -1
ZIC4-215ENST00000493664 NDUFS5O43920 106 aa8.79□□□□□ -1
ZIC4-215ENST00000493664 PHF5AQ7RTV0 110 aaKnown RBP8.79□□□□□ -1
ZIC4-215ENST00000493664 TRAV22A0A0B4J277 110 aa8.79□□□□□ -1
ZIC4-215ENST00000493664 C8orf87E5RJ46 101 aa8.79□□□□□ -1
ZIC4-215ENST00000493664 UBE2AP49459 152 aa8.79□□□□□ -1
ZIC4-215ENST00000493664 C1orf64Q8NEQ6 169 aa8.79□□□□□ -1
ZIC4-215ENST00000493664 A8MU10 97 aa8.78□□□□□ -1
ZIC4-215ENST00000493664 CNBPP62633 177 aaKnown RBP8.74□□□□□ -1.01
ZIC4-215ENST00000493664 SPTSSBQ8NFR3 76 aa8.74□□□□□ -1.01
ZIC4-215ENST00000493664 A8MUN3 132 aa8.73□□□□□ -1.01
ZIC4-215ENST00000493664 IGLV8-61A0A075B6I0 122 aa8.73□□□□□ -1.01
ZIC4-215ENST00000493664 UBE2DNLQ8IWF7 75 aa8.72□□□□□ -1.01
ZIC4-215ENST00000493664 LINC00208Q96KT6 92 aa8.72□□□□□ -1.01
ZIC4-215ENST00000493664 PLECQ15149 4684 aaKnown RBP8.72□□□□□ -1.01
ZIC4-215ENST00000493664 KRTAP29-1A8MX34 341 aaPredicted RBP8.69□□□□□ -1.02
ZIC4-215ENST00000493664 MP68P56378 58 aa8.69□□□□□ -1.02
ZIC4-215ENST00000493664 CASC2Q6XLA1 102 aa8.68□□□□□ -1.02
ZIC4-215ENST00000493664 PANO1I0J062 215 aa8.67□□□□□ -1.02
ZIC4-215ENST00000493664 ATP11AUNQ6ZP68 121 aa8.67□□□□□ -1.02
ZIC4-215ENST00000493664 Q5VV11 94 aa8.66□□□□□ -1.02
ZIC4-215ENST00000493664 CHKB-CPT1BH3BT56 60 aa8.66□□□□□ -1.02
ZIC4-215ENST00000493664 H0Y9P7 68 aa8.65□□□□□ -1.02
ZIC4-215ENST00000493664 LINC00472Q9H8W2 130 aa8.65□□□□□ -1.02
ZIC4-215ENST00000493664 C7orf65Q6ZTY9 151 aa8.64□□□□□ -1.03
ZIC4-215ENST00000493664 A6NN06 94 aa8.64□□□□□ -1.03
ZIC4-215ENST00000493664 H0Y9J4 135 aa8.64□□□□□ -1.03
ZIC4-215ENST00000493664 LCA10Q71F78 164 aa8.64□□□□□ -1.03
ZIC4-215ENST00000493664 CYP4F30PQ9H0H9 118 aa8.64□□□□□ -1.03
ZIC4-215ENST00000493664 APLNQ9ULZ1 77 aa8.64□□□□□ -1.03
ZIC4-215ENST00000493664 A8MWP4 228 aa8.63□□□□□ -1.03
ZIC4-215ENST00000493664 SPRR1BP22528 89 aa8.63□□□□□ -1.03
ZIC4-215ENST00000493664 PRR26Q8N8Z3 221 aa8.63□□□□□ -1.03
ZIC4-215ENST00000493664 FRAS1Q86XX4 4008 aa8.63□□□□□ -1.03
ZIC4-215ENST00000493664 NDUFB1O75438 58 aa8.63□□□□□ -1.03
ZIC4-215ENST00000493664 C9orf163Q8N9P6 203 aa8.62□□□□□ -1.03
ZIC4-215ENST00000493664 B9D2Q9BPU9 175 aa8.61□□□□□ -1.03
ZIC4-215ENST00000493664 DNHD1Q96M86 4753 aa8.61□□□□□ -1.03
ZIC4-215ENST00000493664 DYNC2H1Q8NCM8 4307 aaKnown RBP8.61□□□□□ -1.03
ZIC4-215ENST00000493664 IGLV9-49A0A0B4J1Y8 123 aa8.61□□□□□ -1.03
ZIC4-215ENST00000493664 C14orf177Q52M58 125 aa8.61□□□□□ -1.03
ZIC4-215ENST00000493664 MMP24-AS1A0A0U1RRL7 71 aa8.56□□□□□ -1.04
ZIC4-215ENST00000493664 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.56□□□□□ -1.04
ZIC4-215ENST00000493664 KRTAP13-1Q8IUC0 172 aa8.55□□□□□ -1.04
ZIC4-215ENST00000493664 STARD9Q9P2P6 4700 aa8.55□□□□□ -1.04
ZIC4-215ENST00000493664 NBDYA0A0U1RRE5 68 aa8.54□□□□□ -1.04
ZIC4-215ENST00000493664 DNAH8Q96JB1 4490 aa8.54□□□□□ -1.04
ZIC4-215ENST00000493664 HECTD4Q9Y4D8 3996 aa8.54□□□□□ -1.04
ZIC4-215ENST00000493664 LIMD2Q9BT23 127 aa8.53□□□□□ -1.04
ZIC4-215ENST00000493664 PRR15LQ9BU68 103 aa8.53□□□□□ -1.04
ZIC4-215ENST00000493664 A6NED7 52 aa8.53□□□□□ -1.04
ZIC4-215ENST00000493664 Q96NJ1 140 aa8.52□□□□□ -1.05
ZIC4-215ENST00000493664 ANAPC11Q9NYG5 84 aa8.52□□□□□ -1.05
ZIC4-215ENST00000493664 KMT2AQ03164 3969 aa8.51□□□□□ -1.05
ZIC4-215ENST00000493664 PCOTHQ58A44 107 aa8.51□□□□□ -1.05
ZIC4-215ENST00000493664 Q6ZRN7 208 aaPredicted RBP8.51□□□□□ -1.05
ZIC4-215ENST00000493664 KRTAP21-3Q3LHN1 58 aa8.51□□□□□ -1.05
ZIC4-215ENST00000493664 SPANXA2-OT1Q8N9U9 137 aa8.51□□□□□ -1.05
ZIC4-215ENST00000493664 H3BPC8 53 aa8.5□□□□□ -1.05
ZIC4-215ENST00000493664 MOBPQ13875 183 aa8.5□□□□□ -1.05
ZIC4-215ENST00000493664 Q8N9P0 234 aaPredicted RBP8.48□□□□□ -1.05
ZIC4-215ENST00000493664 VPS13DQ5THJ4 4388 aa8.48□□□□□ -1.05
ZIC4-215ENST00000493664 SPACA4Q8TDM5 124 aa8.48□□□□□ -1.05
ZIC4-215ENST00000493664 DNAH2Q9P225 4427 aa8.48□□□□□ -1.05
ZIC4-215ENST00000493664 IGHV6-1A0A0B4J1U7 121 aa8.47□□□□□ -1.05
ZIC4-215ENST00000493664 CDC42SE1Q9NRR8 79 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms