RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 Q8N377 158 aa9.31□□□□□ -0.92
HPS4-216ENST00000493455 LAMTOR3Q9UHA4 124 aa9.31□□□□□ -0.92
HPS4-216ENST00000493455 IGLV5-48A0A075B6I7 105 aa9.3□□□□□ -0.92
HPS4-216ENST00000493455 LST1O00453 97 aa9.3□□□□□ -0.92
HPS4-216ENST00000493455 SPRR1BP22528 89 aa9.3□□□□□ -0.92
HPS4-216ENST00000493455 A0A1W2PPM0 123 aa9.29□□□□□ -0.92
HPS4-216ENST00000493455 ATXN8Q156A1 80 aa9.29□□□□□ -0.92
HPS4-216ENST00000493455 MT1HL1P0DM35 61 aa9.28□□□□□ -0.92
HPS4-216ENST00000493455 FABP2P12104 132 aa9.28□□□□□ -0.92
HPS4-216ENST00000493455 ORMDL1Q9P0S3 153 aa9.28□□□□□ -0.92
HPS4-216ENST00000493455 F8WEM9 126 aa9.27□□□□□ -0.93
HPS4-216ENST00000493455 TRACP01848 142 aa9.27□□□□□ -0.93
HPS4-216ENST00000493455 KRTAP10-8P60410 259 aa9.27□□□□□ -0.93
HPS4-216ENST00000493455 OCIAD2Q56VL3 154 aa9.27□□□□□ -0.93
HPS4-216ENST00000493455 SMIM29Q86T20 159 aa9.25□□□□□ -0.93
HPS4-216ENST00000493455 A0A1B0GV72 72 aa9.24□□□□□ -0.93
HPS4-216ENST00000493455 Q8NBF4 154 aa9.24□□□□□ -0.93
HPS4-216ENST00000493455 TRBV20-1A0A075B6N2 111 aa9.23□□□□□ -0.93
HPS4-216ENST00000493455 SPCS1Q9Y6A9 102 aa9.23□□□□□ -0.93
HPS4-216ENST00000493455 GHRHP01286 108 aa9.22□□□□□ -0.93
HPS4-216ENST00000493455 PPDPFLQ8WWR9 84 aa9.22□□□□□ -0.93
HPS4-216ENST00000493455 LINC00304Q8N9R0 145 aa9.21□□□□□ -0.94
HPS4-216ENST00000493455 A0A0G2JQZ4 141 aa9.2□□□□□ -0.94
HPS4-216ENST00000493455 C9JAW5 83 aa9.2□□□□□ -0.94
HPS4-216ENST00000493455 NDUFV3P56181 108 aaKnown RBP9.2□□□□□ -0.94
HPS4-216ENST00000493455 MTURNQ8N3F0 131 aa9.2□□□□□ -0.94
HPS4-216ENST00000493455 H3BMG7 143 aa9.19□□□□□ -0.94
HPS4-216ENST00000493455 BAALC-AS2P0C853 105 aa9.19□□□□□ -0.94
HPS4-216ENST00000493455 HRCT1Q6UXD1 115 aa9.19□□□□□ -0.94
HPS4-216ENST00000493455 TMEM256-PLSCR3K7ERE1 68 aa9.18□□□□□ -0.94
HPS4-216ENST00000493455 C4orf48Q5BLP8 95 aa9.18□□□□□ -0.94
HPS4-216ENST00000493455 SSBP3-AS1Q7Z2R9 100 aa9.18□□□□□ -0.94
HPS4-216ENST00000493455 H3BQ85 93 aa9.17□□□□□ -0.94
HPS4-216ENST00000493455 KRTAP3-3Q9BYR6 98 aa9.16□□□□□ -0.94
HPS4-216ENST00000493455 KRTAP3-2Q9BYR7 98 aa9.16□□□□□ -0.94
HPS4-216ENST00000493455 DMBT1Q9UGM3 2413 aaPredicted RBP9.15□□□□□ -0.94
HPS4-216ENST00000493455 TNXBP22105 4242 aa9.15□□□□□ -0.94
HPS4-216ENST00000493455 K7EP34 96 aa9.15□□□□□ -0.94
HPS4-216ENST00000493455 ANKRD29Q8N6D5 301 aa9.14□□□□□ -0.95
HPS4-216ENST00000493455 UBE2V1Q13404 147 aa9.12□□□□□ -0.95
HPS4-216ENST00000493455 IGFL1Q6UW32 110 aa9.12□□□□□ -0.95
HPS4-216ENST00000493455 Q6JHZ5 121 aa9.11□□□□□ -0.95
HPS4-216ENST00000493455 IGLV8-61A0A075B6I0 122 aa9.1□□□□□ -0.95
HPS4-216ENST00000493455 SPAG11AQ6PDA7 123 aa9.1□□□□□ -0.95
HPS4-216ENST00000493455 GTF2H5Q6ZYL4 71 aa9.1□□□□□ -0.95
HPS4-216ENST00000493455 H3BT86 120 aa9.07□□□□□ -0.96
HPS4-216ENST00000493455 SPINK1P00995 79 aa9.07□□□□□ -0.96
HPS4-216ENST00000493455 RBM3P98179 157 aaKnown RBP9.06□□□□□ -0.96
HPS4-216ENST00000493455 RETNLBQ9BQ08 111 aa9.06□□□□□ -0.96
HPS4-216ENST00000493455 A0A1B0GV90 55 aa9.05□□□□□ -0.96
HPS4-216ENST00000493455 VPS25Q9BRG1 176 aa9.05□□□□□ -0.96
HPS4-216ENST00000493455 DSCR8Q96T75 97 aa9.04□□□□□ -0.96
HPS4-216ENST00000493455 CD164Q04900 197 aa9.03□□□□□ -0.96
HPS4-216ENST00000493455 JMJD7-PLA2G4BH0Y9G9 81 aa9.02□□□□□ -0.97
HPS4-216ENST00000493455 SMCPP49901 116 aaPredicted RBP9.02□□□□□ -0.97
HPS4-216ENST00000493455 C14orf132Q9NPU4 83 aa9.02□□□□□ -0.97
HPS4-216ENST00000493455 CCKP06307 115 aa9.01□□□□□ -0.97
HPS4-216ENST00000493455 LIMD2Q9BT23 127 aa9.01□□□□□ -0.97
HPS4-216ENST00000493455 TRBV7-7A0A0K0K1E9 115 aa9□□□□□ -0.97
HPS4-216ENST00000493455 A0A1W2PNM2 257 aa9□□□□□ -0.97
HPS4-216ENST00000493455 PRO0461Q9UI25 63 aa9□□□□□ -0.97
HPS4-216ENST00000493455 TRBV7-4A0A0J9YYF1 115 aa8.99□□□□□ -0.97
HPS4-216ENST00000493455 PRR4Q16378 134 aa8.99□□□□□ -0.97
HPS4-216ENST00000493455 TEN1Q86WV5 123 aa8.99□□□□□ -0.97
HPS4-216ENST00000493455 RPS29P62273 56 aaKnown RBP8.98□□□□□ -0.97
HPS4-216ENST00000493455 HERC1Q15751 4861 aa8.97□□□□□ -0.97
HPS4-216ENST00000493455 A0A087WSZ3 146 aa8.96□□□□□ -0.98
HPS4-216ENST00000493455 F8W1H4 67 aa8.95□□□□□ -0.98
HPS4-216ENST00000493455 Q6Q795 121 aa8.95□□□□□ -0.98
HPS4-216ENST00000493455 OBSCN-AS1Q96MR7 158 aa8.95□□□□□ -0.98
HPS4-216ENST00000493455 Q6ZQT0 140 aa8.94□□□□□ -0.98
HPS4-216ENST00000493455 LOC110117498A0A087WWA1 95 aa8.92□□□□□ -0.98
HPS4-216ENST00000493455 SS18L2Q9UHA2 77 aa8.91□□□□□ -0.98
HPS4-216ENST00000493455 PDE6GP18545 87 aa8.9□□□□□ -0.98
HPS4-216ENST00000493455 ETDBQ3ZM63 59 aa8.9□□□□□ -0.98
HPS4-216ENST00000493455 IGLV7-46A0A075B6I9 117 aa8.88□□□□□ -0.99
HPS4-216ENST00000493455 Q5XG85 94 aa8.88□□□□□ -0.99
HPS4-216ENST00000493455 C1orf195Q5TG92 126 aa8.87□□□□□ -0.99
HPS4-216ENST00000493455 FP248Q71RG6 208 aaPredicted RBP8.84□□□□□ -0.99
HPS4-216ENST00000493455 DEFB116Q30KQ4 102 aa8.83□□□□□ -1
HPS4-216ENST00000493455 ASB16-AS1Q495Z4 193 aa8.83□□□□□ -1
HPS4-216ENST00000493455 C21orf62-AS1Q17RA5 79 aa8.81□□□□□ -1
HPS4-216ENST00000493455 SIGMAR1Q99720 223 aa8.81□□□□□ -1
HPS4-216ENST00000493455 HMCN2Q8NDA2 5059 aa8.79□□□□□ -1
HPS4-216ENST00000493455 Q96NJ1 140 aa8.79□□□□□ -1
HPS4-216ENST00000493455 IGKV4-1P06312 121 aa8.78□□□□□ -1
HPS4-216ENST00000493455 C9orf92A6NGG3 77 aa8.77□□□□□ -1.01
HPS4-216ENST00000493455 NREPQ16612 68 aa8.77□□□□□ -1.01
HPS4-216ENST00000493455 A0A1B0GW54 56 aa8.76□□□□□ -1.01
HPS4-216ENST00000493455 CDIP1Q9H305 208 aa8.74□□□□□ -1.01
HPS4-216ENST00000493455 LINC00472Q9H8W2 130 aa8.74□□□□□ -1.01
HPS4-216ENST00000493455 TPRXLQ17RH7 258 aa8.72□□□□□ -1.01
HPS4-216ENST00000493455 KRTAP13-3Q3SY46 172 aa8.72□□□□□ -1.01
HPS4-216ENST00000493455 LINC00846Q9NV44 126 aa8.71□□□□□ -1.02
HPS4-216ENST00000493455 Q6ZVQ6 151 aa8.7□□□□□ -1.02
HPS4-216ENST00000493455 LPAP08519 4548 aa8.69□□□□□ -1.02
HPS4-216ENST00000493455 J3KT08 172 aa8.68□□□□□ -1.02
HPS4-216ENST00000493455 UBL5Q9BZL1 73 aa8.68□□□□□ -1.02
HPS4-216ENST00000493455 IGHV6-1A0A0B4J1U7 121 aa8.67□□□□□ -1.02
HPS4-216ENST00000493455 DSCR10P59022 87 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms