RNA–Protein interactions for RNA: ENST00000492983.1

ATP13A3-209, Transcript of ATPase 13A3, humanhuman

TSL 2

Gene ATP13A3, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-209ENST00000492983 MT1XP80297 61 aa-0.87□□□□□ -2.55
ATP13A3-209ENST00000492983 CDKN2A-AS1Q9UH64 79 aa-0.87□□□□□ -2.55
ATP13A3-209ENST00000492983 TLN2Q9Y4G6 2542 aa-0.87□□□□□ -2.55
ATP13A3-209ENST00000492983 RANBP2P49792 3224 aaKnown RBP-0.87□□□□□ -2.55
ATP13A3-209ENST00000492983 ZFHX4Q86UP3 3567 aa-0.87□□□□□ -2.55
ATP13A3-209ENST00000492983 CLIP1P30622 1438 aa-0.88□□□□□ -2.55
ATP13A3-209ENST00000492983 FREM2Q5SZK8 3169 aa-0.88□□□□□ -2.55
ATP13A3-209ENST00000492983 DEFB1P60022 68 aa-0.88□□□□□ -2.55
ATP13A3-209ENST00000492983 ALKAL2Q6UX46 152 aa-0.88□□□□□ -2.55
ATP13A3-209ENST00000492983 WFDC13Q8IUB5 93 aa-0.89□□□□□ -2.55
ATP13A3-209ENST00000492983 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.89□□□□□ -2.55
ATP13A3-209ENST00000492983 H3BNG1 76 aa-0.9□□□□□ -2.55
ATP13A3-209ENST00000492983 MT1BP07438 61 aa-0.9□□□□□ -2.55
ATP13A3-209ENST00000492983 AKAP12Q02952 1782 aa-0.91□□□□□ -2.55
ATP13A3-209ENST00000492983 SPEGQ15772 3267 aa-0.91□□□□□ -2.55
ATP13A3-209ENST00000492983 QSER1Q2KHR3 1735 aa-0.91□□□□□ -2.55
ATP13A3-209ENST00000492983 M0R143 59 aa-0.91□□□□□ -2.56
ATP13A3-209ENST00000492983 MT1GP13640 62 aa-0.91□□□□□ -2.56
ATP13A3-209ENST00000492983 HIGD1BQ9P298 99 aa-0.91□□□□□ -2.56
ATP13A3-209ENST00000492983 ANKRD26Q9UPS8 1709 aa-0.92□□□□□ -2.56
ATP13A3-209ENST00000492983 K7EP34 96 aa-0.92□□□□□ -2.56
ATP13A3-209ENST00000492983 SPTAN1Q13813 2472 aaKnown RBP-0.92□□□□□ -2.56
ATP13A3-209ENST00000492983 CSMD2Q7Z408 3487 aa-0.92□□□□□ -2.56
ATP13A3-209ENST00000492983 MT1MQ8N339 61 aa-0.94□□□□□ -2.56
ATP13A3-209ENST00000492983 UBE2D4Q9Y2X8 147 aa-0.94□□□□□ -2.56
ATP13A3-209ENST00000492983 TROQ12816 1431 aaPredicted RBP-0.95□□□□□ -2.56
ATP13A3-209ENST00000492983 ANKRD50Q9ULJ7 1429 aa-0.95□□□□□ -2.56
ATP13A3-209ENST00000492983 H0YGG7 62 aa-0.95□□□□□ -2.56
ATP13A3-209ENST00000492983 MT2AP02795 61 aa-0.95□□□□□ -2.56
ATP13A3-209ENST00000492983 KRTAP19-5Q3LI72 72 aa-0.95□□□□□ -2.56
ATP13A3-209ENST00000492983 MGAQ8IWI9 3026 aa-0.96□□□□□ -2.56
ATP13A3-209ENST00000492983 EPRSP07814 1512 aaKnown RBP-0.96□□□□□ -2.56
ATP13A3-209ENST00000492983 ADAMTS12P58397 1594 aa-0.96□□□□□ -2.56
ATP13A3-209ENST00000492983 DMDP11532 3685 aa-0.97□□□□□ -2.56
ATP13A3-209ENST00000492983 ABCC10Q5T3U5 1492 aa-0.97□□□□□ -2.56
ATP13A3-209ENST00000492983 PTPN23Q9H3S7 1636 aa-0.97□□□□□ -2.57
ATP13A3-209ENST00000492983 PREX1Q8TCU6 1659 aa-0.97□□□□□ -2.57
ATP13A3-209ENST00000492983 FANCAO15360 1455 aa-0.98□□□□□ -2.57
ATP13A3-209ENST00000492983 MAGI2Q86UL8 1455 aa-0.98□□□□□ -2.57
ATP13A3-209ENST00000492983 CENPEQ02224 2701 aa-0.98□□□□□ -2.57
ATP13A3-209ENST00000492983 COX7BP24311 80 aa-0.98□□□□□ -2.57
ATP13A3-209ENST00000492983 DEFB110Q30KQ9 67 aa-0.98□□□□□ -2.57
ATP13A3-209ENST00000492983 DCHS1Q96JQ0 3298 aa-0.98□□□□□ -2.57
ATP13A3-209ENST00000492983 CEP350Q5VT06 3117 aa-0.98□□□□□ -2.57
ATP13A3-209ENST00000492983 ATP10BO94823 1461 aa-0.99□□□□□ -2.57
ATP13A3-209ENST00000492983 CRYBG3Q68DQ2 2970 aa-0.99□□□□□ -2.57
ATP13A3-209ENST00000492983 ALKQ9UM73 1620 aa-0.99□□□□□ -2.57
ATP13A3-209ENST00000492983 S4R3F8 94 aa-0.99□□□□□ -2.57
ATP13A3-209ENST00000492983 CDC42BPGQ6DT37 1551 aa-1□□□□□ -2.57
ATP13A3-209ENST00000492983 UBR1Q8IWV7 1749 aa-1□□□□□ -2.57
ATP13A3-209ENST00000492983 WDFY4Q6ZS81 3184 aa-1□□□□□ -2.57
ATP13A3-209ENST00000492983 SMR3BP02814 79 aaPredicted RBP-1□□□□□ -2.57
ATP13A3-209ENST00000492983 MT1EP04732 61 aa-1□□□□□ -2.57
ATP13A3-209ENST00000492983 NMSQ5H8A3 153 aa-1□□□□□ -2.57
ATP13A3-209ENST00000492983 MT1LQ93083 61 aa-1□□□□□ -2.57
ATP13A3-209ENST00000492983 LRRC7Q96NW7 1537 aa-1□□□□□ -2.57
ATP13A3-209ENST00000492983 RGPD1P0DJD0 1748 aa-1.01□□□□□ -2.57
ATP13A3-209ENST00000492983 RGPD4Q7Z3J3 1758 aa-1.01□□□□□ -2.57
ATP13A3-209ENST00000492983 WDFY3Q8IZQ1 3526 aa-1.01□□□□□ -2.57
ATP13A3-209ENST00000492983 C9orf92A6NGG3 77 aa-1.01□□□□□ -2.57
ATP13A3-209ENST00000492983 PEA15Q15121 130 aa-1.01□□□□□ -2.57
ATP13A3-209ENST00000492983 HMGN2P05204 90 aaKnown RBP-1.02□□□□□ -2.57
ATP13A3-209ENST00000492983 SMIM11AP58511 58 aa-1.02□□□□□ -2.57
ATP13A3-209ENST00000492983 MYO3AQ8NEV4 1616 aa-1.02□□□□□ -2.57
ATP13A3-209ENST00000492983 SNHG12Q9BXW3 62 aa-1.02□□□□□ -2.57
ATP13A3-209ENST00000492983 EP400Q96L91 3159 aa-1.02□□□□□ -2.57
ATP13A3-209ENST00000492983 CFAP54Q96N23 3096 aa-1.02□□□□□ -2.57
ATP13A3-209ENST00000492983 RGPD3A6NKT7 1758 aaPredicted RBP-1.03□□□□□ -2.57
ATP13A3-209ENST00000492983 CICQ96RK0 1608 aaPredicted RBP-1.03□□□□□ -2.57
ATP13A3-209ENST00000492983 A0A1B0GUT8 65 aa-1.03□□□□□ -2.57
ATP13A3-209ENST00000492983 PLGLAQ15195 96 aa-1.03□□□□□ -2.57
ATP13A3-209ENST00000492983 KRTAP8-1Q8IUC2 63 aa-1.03□□□□□ -2.57
ATP13A3-209ENST00000492983 C20orf78Q9BR46 151 aa-1.03□□□□□ -2.57
ATP13A3-209ENST00000492983 C4AP0C0L4 1744 aa-1.03□□□□□ -2.58
ATP13A3-209ENST00000492983 C4BP0C0L5 1744 aa-1.03□□□□□ -2.58
ATP13A3-209ENST00000492983 SUPT6HQ7KZ85 1726 aaKnown RBP-1.03□□□□□ -2.58
ATP13A3-209ENST00000492983 IQCF6A8MYZ5 107 aa-1.04□□□□□ -2.58
ATP13A3-209ENST00000492983 GYPAP02724 150 aa-1.04□□□□□ -2.58
ATP13A3-209ENST00000492983 RPL38P63173 70 aaKnown RBP-1.04□□□□□ -2.58
ATP13A3-209ENST00000492983 WFDC9Q8NEX5 89 aa-1.04□□□□□ -2.58
ATP13A3-209ENST00000492983 GAFA1Q96PS6 74 aa-1.04□□□□□ -2.58
ATP13A3-209ENST00000492983 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.04□□□□□ -2.58
ATP13A3-209ENST00000492983 LRRC9Q6ZRR7 1453 aa-1.05□□□□□ -2.58
ATP13A3-209ENST00000492983 VPS8Q8N3P4 1428 aa-1.05□□□□□ -2.58
ATP13A3-209ENST00000492983 RGPD8O14715 1765 aaPredicted RBP-1.05□□□□□ -2.58
ATP13A3-209ENST00000492983 RGPD5Q99666 1765 aa-1.05□□□□□ -2.58
ATP13A3-209ENST00000492983 FRYLO94915 3013 aa-1.05□□□□□ -2.58
ATP13A3-209ENST00000492983 S100A8P05109 93 aa-1.05□□□□□ -2.58
ATP13A3-209ENST00000492983 PKIAP61925 76 aa-1.05□□□□□ -2.58
ATP13A3-209ENST00000492983 NDUFA3O95167 84 aa-1.06□□□□□ -2.58
ATP13A3-209ENST00000492983 CLPSL2Q6UWE3 100 aa-1.06□□□□□ -2.58
ATP13A3-209ENST00000492983 VPS13CQ709C8 3753 aa-1.06□□□□□ -2.58
ATP13A3-209ENST00000492983 DEFB4AO15263 64 aa-1.07□□□□□ -2.58
ATP13A3-209ENST00000492983 SCN11AQ9UI33 1791 aa-1.07□□□□□ -2.58
ATP13A3-209ENST00000492983 MKI67P46013 3256 aaKnown RBP-1.07□□□□□ -2.58
ATP13A3-209ENST00000492983 DNAH14Q0VDD8 3507 aa-1.08□□□□□ -2.58
ATP13A3-209ENST00000492983 MAP3K1Q13233 1512 aa-1.08□□□□□ -2.58
ATP13A3-209ENST00000492983 CYB5AP00167 134 aa-1.08□□□□□ -2.58
ATP13A3-209ENST00000492983 MT1FP04733 61 aa-1.08□□□□□ -2.58
ATP13A3-209ENST00000492983 ATP7BP35670 1465 aa-1.08□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms