RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 C4orf26Q17RF5 130 aa3.34□□□□□ -1.87
FN1-224ENST00000492816 MYO15AQ9UKN7 3530 aa3.34□□□□□ -1.87
FN1-224ENST00000492816 SPINK7P58062 85 aa3.34□□□□□ -1.87
FN1-224ENST00000492816 TRIOO75962 3097 aa3.34□□□□□ -1.87
FN1-224ENST00000492816 KRTAP10-1P60331 282 aa3.34□□□□□ -1.87
FN1-224ENST00000492816 GIG44P09565 113 aaPredicted RBP3.34□□□□□ -1.88
FN1-224ENST00000492816 DMDP11532 3685 aa3.33□□□□□ -1.88
FN1-224ENST00000492816 WDFY3Q8IZQ1 3526 aa3.33□□□□□ -1.88
FN1-224ENST00000492816 STAB1Q9NY15 2570 aa3.33□□□□□ -1.88
FN1-224ENST00000492816 A0A1W2PNM2 257 aa3.33□□□□□ -1.88
FN1-224ENST00000492816 MAST4O15021 2626 aa3.33□□□□□ -1.88
FN1-224ENST00000492816 CEP295Q9C0D2 2601 aa3.32□□□□□ -1.88
FN1-224ENST00000492816 HECTD1Q9ULT8 2610 aa3.32□□□□□ -1.88
FN1-224ENST00000492816 VCANP13611 3396 aa3.32□□□□□ -1.88
FN1-224ENST00000492816 KTN1-AS1Q86SY8 53 aa3.32□□□□□ -1.88
FN1-224ENST00000492816 DNAH14Q0VDD8 3507 aa3.32□□□□□ -1.88
FN1-224ENST00000492816 SPANXA2-OT1Q8N9U9 137 aa3.31□□□□□ -1.88
FN1-224ENST00000492816 MUC3AQ02505 3323 aa3.3□□□□□ -1.88
FN1-224ENST00000492816 C5orf42Q9H799 3197 aa3.3□□□□□ -1.88
FN1-224ENST00000492816 BAHCC1Q9P281 2608 aa3.29□□□□□ -1.88
FN1-224ENST00000492816 URB1-AS1Q96HZ7 61 aa3.29□□□□□ -1.88
FN1-224ENST00000492816 A0A0A0MQY5 61 aa3.29□□□□□ -1.88
FN1-224ENST00000492816 KRTAP10-2P60368 255 aa3.29□□□□□ -1.88
FN1-224ENST00000492816 LAMA1P25391 3075 aa3.28□□□□□ -1.88
FN1-224ENST00000492816 A0A096LNJ9 63 aa3.28□□□□□ -1.88
FN1-224ENST00000492816 A0A0C4DFX4 3053 aa3.28□□□□□ -1.88
FN1-224ENST00000492816 C20orf166-AS1Q96NR2 134 aa3.28□□□□□ -1.88
FN1-224ENST00000492816 CFAP46Q8IYW2 2715 aa3.28□□□□□ -1.88
FN1-224ENST00000492816 FRYLO94915 3013 aa3.28□□□□□ -1.88
FN1-224ENST00000492816 PRO0628Q9UI54 55 aa3.27□□□□□ -1.89
FN1-224ENST00000492816 DMBT1Q9UGM3 2413 aaPredicted RBP3.27□□□□□ -1.89
FN1-224ENST00000492816 A0A0G2JQZ4 141 aa3.27□□□□□ -1.89
FN1-224ENST00000492816 RPS29P62273 56 aaKnown RBP3.26□□□□□ -1.89
FN1-224ENST00000492816 ADM2Q7Z4H4 148 aa3.26□□□□□ -1.89
FN1-224ENST00000492816 SPRR1BP22528 89 aa3.25□□□□□ -1.89
FN1-224ENST00000492816 SPEGQ15772 3267 aa3.25□□□□□ -1.89
FN1-224ENST00000492816 ZFHX4Q86UP3 3567 aa3.24□□□□□ -1.89
FN1-224ENST00000492816 ATRQ13535 2644 aa3.24□□□□□ -1.89
FN1-224ENST00000492816 PRO2289Q9P1D8 64 aa3.24□□□□□ -1.89
FN1-224ENST00000492816 Q6ZR54 194 aa3.23□□□□□ -1.89
FN1-224ENST00000492816 SETXQ7Z333 2677 aaKnown RBP3.22□□□□□ -1.89
FN1-224ENST00000492816 KMT2BQ9UMN6 2715 aaPredicted RBP3.21□□□□□ -1.89
FN1-224ENST00000492816 KLKP1Q107X0 134 aa3.21□□□□□ -1.9
FN1-224ENST00000492816 RPL37P61927 97 aaKnown RBP3.21□□□□□ -1.9
FN1-224ENST00000492816 CFAP47Q6ZTR5 3102 aa3.21□□□□□ -1.9
FN1-224ENST00000492816 LINC00310P59036 64 aa3.21□□□□□ -1.9
FN1-224ENST00000492816 ITPR3Q14573 2671 aa3.21□□□□□ -1.9
FN1-224ENST00000492816 FLNAP21333 2647 aaKnown RBP3.2□□□□□ -1.9
FN1-224ENST00000492816 Q5W150 140 aa3.19□□□□□ -1.9
FN1-224ENST00000492816 WDFY4Q6ZS81 3184 aa3.19□□□□□ -1.9
FN1-224ENST00000492816 CELSR3Q9NYQ7 3312 aa3.19□□□□□ -1.9
FN1-224ENST00000492816 A8MUU9 505 aa3.19□□□□□ -1.9
FN1-224ENST00000492816 Q75L30 129 aa3.19□□□□□ -1.9
FN1-224ENST00000492816 WDR87Q6ZQQ6 2873 aa3.18□□□□□ -1.9
FN1-224ENST00000492816 PANO1I0J062 215 aa3.17□□□□□ -1.9
FN1-224ENST00000492816 BSNQ9UPA5 3926 aa3.16□□□□□ -1.9
FN1-224ENST00000492816 TNP1P09430 55 aa3.16□□□□□ -1.9
FN1-224ENST00000492816 P0C880 135 aa3.16□□□□□ -1.9
FN1-224ENST00000492816 FRYQ5TBA9 3013 aa3.16□□□□□ -1.9
FN1-224ENST00000492816 ROMO1P60602 79 aa3.16□□□□□ -1.9
FN1-224ENST00000492816 Q8N9P0 234 aaPredicted RBP3.14□□□□□ -1.91
FN1-224ENST00000492816 KRTAP1-5Q9BYS1 174 aa3.14□□□□□ -1.91
FN1-224ENST00000492816 SPRR1AP35321 89 aa3.14□□□□□ -1.91
FN1-224ENST00000492816 MMP24-AS1A0A0U1RRL7 71 aa3.14□□□□□ -1.91
FN1-224ENST00000492816 EIF4EBP3O60516 100 aaPredicted RBP3.14□□□□□ -1.91
FN1-224ENST00000492816 FREM2Q5SZK8 3169 aa3.13□□□□□ -1.91
FN1-224ENST00000492816 VPS13AQ96RL7 3174 aa3.13□□□□□ -1.91
FN1-224ENST00000492816 SMCPP49901 116 aaPredicted RBP3.12□□□□□ -1.91
FN1-224ENST00000492816 COL6A3P12111 3177 aa3.12□□□□□ -1.91
FN1-224ENST00000492816 PRO0461Q9UI25 63 aa3.12□□□□□ -1.91
FN1-224ENST00000492816 KRTAP10-10P60014 251 aa3.12□□□□□ -1.91
FN1-224ENST00000492816 KRTAP10-8P60410 259 aa3.11□□□□□ -1.91
FN1-224ENST00000492816 KALRNO60229 2985 aa3.11□□□□□ -1.91
FN1-224ENST00000492816 ASPMQ8IZT6 3477 aa3.11□□□□□ -1.91
FN1-224ENST00000492816 NOTCH1P46531 2555 aa3.11□□□□□ -1.91
FN1-224ENST00000492816 ASB16-AS1Q495Z4 193 aa3.1□□□□□ -1.91
FN1-224ENST00000492816 RELNP78509 3460 aa3.09□□□□□ -1.91
FN1-224ENST00000492816 LINC00472Q9H8W2 130 aa3.09□□□□□ -1.91
FN1-224ENST00000492816 A0A087X002 238 aa3.09□□□□□ -1.91
FN1-224ENST00000492816 SPATA8Q6RVD6 105 aa3.09□□□□□ -1.92
FN1-224ENST00000492816 DCHS2Q6V1P9 2916 aa3.08□□□□□ -1.92
FN1-224ENST00000492816 TEP1Q99973 2627 aaKnown RBP3.08□□□□□ -1.92
FN1-224ENST00000492816 Q8NDZ9 215 aa3.07□□□□□ -1.92
FN1-224ENST00000492816 NBEAL1Q6ZS30 2694 aa3.07□□□□□ -1.92
FN1-224ENST00000492816 TEX15Q9BXT5 2789 aa3.07□□□□□ -1.92
FN1-224ENST00000492816 KRTAP29-1A8MX34 341 aaPredicted RBP3.06□□□□□ -1.92
FN1-224ENST00000492816 SMG1Q96Q15 3661 aaKnown RBP3.06□□□□□ -1.92
FN1-224ENST00000492816 NBEAQ8NFP9 2946 aa3.06□□□□□ -1.92
FN1-224ENST00000492816 TPRXLQ17RH7 258 aa3.06□□□□□ -1.92
FN1-224ENST00000492816 Q5XG85 94 aa3.05□□□□□ -1.92
FN1-224ENST00000492816 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
FN1-224ENST00000492816 OCR1Q9BZK8 76 aa3.05□□□□□ -1.92
FN1-224ENST00000492816 LOC400499M0QZD8 3231 aa3.05□□□□□ -1.92
FN1-224ENST00000492816 ZNF292O60281 2723 aa3.05□□□□□ -1.92
FN1-224ENST00000492816 UNC79Q9P2D8 2635 aa3.05□□□□□ -1.92
FN1-224ENST00000492816 ITPR1Q14643 2758 aa3.05□□□□□ -1.92
FN1-224ENST00000492816 KRTAP26-1Q6PEX3 210 aa3.04□□□□□ -1.92
FN1-224ENST00000492816 DMXL1Q9Y485 3027 aa3.03□□□□□ -1.92
FN1-224ENST00000492816 HRNRQ86YZ3 2850 aaPredicted RBP3.02□□□□□ -1.93
FN1-224ENST00000492816 STAB2Q8WWQ8 2551 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms