RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SNHG12Q9BXW3 62 aa-0.27□□□□□ -2.45
HMGB1P30-201ENST00000492455 FLGP20930 4061 aaPredicted RBP-0.27□□□□□ -2.45
HMGB1P30-201ENST00000492455 CELSR3Q9NYQ7 3312 aa-0.27□□□□□ -2.45
HMGB1P30-201ENST00000492455 ALKQ9UM73 1620 aa-0.27□□□□□ -2.45
HMGB1P30-201ENST00000492455 ADAMTS12P58397 1594 aa-0.28□□□□□ -2.45
HMGB1P30-201ENST00000492455 TEP1Q99973 2627 aaKnown RBP-0.28□□□□□ -2.45
HMGB1P30-201ENST00000492455 LAMA2P24043 3122 aaKnown RBP-0.28□□□□□ -2.45
HMGB1P30-201ENST00000492455 KALRNO60229 2985 aa-0.28□□□□□ -2.45
HMGB1P30-201ENST00000492455 WDR87Q6ZQQ6 2873 aa-0.28□□□□□ -2.45
HMGB1P30-201ENST00000492455 H3BUA1 57 aa-0.28□□□□□ -2.45
HMGB1P30-201ENST00000492455 MT1HL1P0DM35 61 aa-0.28□□□□□ -2.45
HMGB1P30-201ENST00000492455 NREPQ16612 68 aa-0.28□□□□□ -2.45
HMGB1P30-201ENST00000492455 TIAM2Q8IVF5 1701 aa-0.28□□□□□ -2.45
HMGB1P30-201ENST00000492455 CRYBG1Q9Y4K1 1723 aa-0.28□□□□□ -2.45
HMGB1P30-201ENST00000492455 CEP290O15078 2479 aa-0.28□□□□□ -2.45
HMGB1P30-201ENST00000492455 VPS8Q8N3P4 1428 aa-0.29□□□□□ -2.46
HMGB1P30-201ENST00000492455 UACAQ9BZF9 1416 aa-0.29□□□□□ -2.46
HMGB1P30-201ENST00000492455 PLECQ15149 4684 aaKnown RBP-0.29□□□□□ -2.46
HMGB1P30-201ENST00000492455 ZZEF1O43149 2961 aa-0.29□□□□□ -2.46
HMGB1P30-201ENST00000492455 PREX1Q8TCU6 1659 aa-0.29□□□□□ -2.46
HMGB1P30-201ENST00000492455 LYNX1G3V0Z9 82 aa-0.29□□□□□ -2.46
HMGB1P30-201ENST00000492455 SMIM13P0DJ93 91 aa-0.29□□□□□ -2.46
HMGB1P30-201ENST00000492455 DEFB130BP0DP73 79 aa-0.29□□□□□ -2.46
HMGB1P30-201ENST00000492455 DEFB130AP0DP74 79 aa-0.29□□□□□ -2.46
HMGB1P30-201ENST00000492455 MT1HP80294 61 aa-0.29□□□□□ -2.46
HMGB1P30-201ENST00000492455 NOP10Q9NPE3 64 aaKnown RBP-0.29□□□□□ -2.46
HMGB1P30-201ENST00000492455 LAMA1P25391 3075 aa-0.29□□□□□ -2.46
HMGB1P30-201ENST00000492455 DNAH9Q9NYC9 4486 aa-0.29□□□□□ -2.46
HMGB1P30-201ENST00000492455 SVEP1Q4LDE5 3571 aa-0.29□□□□□ -2.46
HMGB1P30-201ENST00000492455 NEXMIFQ5QGS0 1516 aa-0.29□□□□□ -2.46
HMGB1P30-201ENST00000492455 GCN1Q92616 2671 aaKnown RBP-0.3□□□□□ -2.46
HMGB1P30-201ENST00000492455 DEFB131BA0A096LNP1 70 aa-0.3□□□□□ -2.46
HMGB1P30-201ENST00000492455 MT1BP07438 61 aa-0.3□□□□□ -2.46
HMGB1P30-201ENST00000492455 DEFB1P60022 68 aa-0.3□□□□□ -2.46
HMGB1P30-201ENST00000492455 MT1XP80297 61 aa-0.3□□□□□ -2.46
HMGB1P30-201ENST00000492455 MINOS1Q5TGZ0 78 aa-0.3□□□□□ -2.46
HMGB1P30-201ENST00000492455 CLPSL2Q6UWE3 100 aa-0.3□□□□□ -2.46
HMGB1P30-201ENST00000492455 ST20Q9HBF5 79 aa-0.3□□□□□ -2.46
HMGB1P30-201ENST00000492455 PKD1L2Q7Z442 2459 aa-0.3□□□□□ -2.46
HMGB1P30-201ENST00000492455 HFM1A2PYH4 1435 aa-0.3□□□□□ -2.46
HMGB1P30-201ENST00000492455 PKHD1L1Q86WI1 4243 aa-0.3□□□□□ -2.46
HMGB1P30-201ENST00000492455 MUC17Q685J3 4493 aa-0.3□□□□□ -2.46
HMGB1P30-201ENST00000492455 RGPD3A6NKT7 1758 aaPredicted RBP-0.31□□□□□ -2.46
HMGB1P30-201ENST00000492455 RGPD4Q7Z3J3 1758 aa-0.31□□□□□ -2.46
HMGB1P30-201ENST00000492455 MT1MQ8N339 61 aa-0.31□□□□□ -2.46
HMGB1P30-201ENST00000492455 DSPP15924 2871 aaKnown RBP-0.31□□□□□ -2.46
HMGB1P30-201ENST00000492455 CCDC88BA6NC98 1476 aa-0.31□□□□□ -2.46
HMGB1P30-201ENST00000492455 NCOA2Q15596 1464 aa-0.31□□□□□ -2.46
HMGB1P30-201ENST00000492455 ABCC10Q5T3U5 1492 aa-0.31□□□□□ -2.46
HMGB1P30-201ENST00000492455 DNAH6Q9C0G6 4158 aa-0.31□□□□□ -2.46
HMGB1P30-201ENST00000492455 CEP162Q5TB80 1403 aa-0.31□□□□□ -2.46
HMGB1P30-201ENST00000492455 C4AP0C0L4 1744 aa-0.32□□□□□ -2.46
HMGB1P30-201ENST00000492455 C4BP0C0L5 1744 aa-0.32□□□□□ -2.46
HMGB1P30-201ENST00000492455 MYH4Q9Y623 1939 aa-0.32□□□□□ -2.46
HMGB1P30-201ENST00000492455 RALGAPBQ86X10 1494 aa-0.32□□□□□ -2.46
HMGB1P30-201ENST00000492455 MMP24-AS1A0A0U1RRL7 71 aa-0.32□□□□□ -2.46
HMGB1P30-201ENST00000492455 LCE6AA0A183 80 aa-0.32□□□□□ -2.46
HMGB1P30-201ENST00000492455 H3BVH4 76 aa-0.32□□□□□ -2.46
HMGB1P30-201ENST00000492455 MT2AP02795 61 aa-0.32□□□□□ -2.46
HMGB1P30-201ENST00000492455 FCER1GP30273 86 aa-0.32□□□□□ -2.46
HMGB1P30-201ENST00000492455 VPS13DQ5THJ4 4388 aa-0.32□□□□□ -2.46
HMGB1P30-201ENST00000492455 DEPDC5O75140 1603 aa-0.32□□□□□ -2.46
HMGB1P30-201ENST00000492455 CCDC168Q8NDH2 2452 aa-0.32□□□□□ -2.46
HMGB1P30-201ENST00000492455 SUPT6HQ7KZ85 1726 aaKnown RBP-0.33□□□□□ -2.46
HMGB1P30-201ENST00000492455 LAMA3Q16787 3333 aa-0.33□□□□□ -2.46
HMGB1P30-201ENST00000492455 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.33□□□□□ -2.46
HMGB1P30-201ENST00000492455 H0YAA0 97 aa-0.33□□□□□ -2.46
HMGB1P30-201ENST00000492455 TNP1P09430 55 aa-0.33□□□□□ -2.46
HMGB1P30-201ENST00000492455 MT1GP13640 62 aa-0.33□□□□□ -2.46
HMGB1P30-201ENST00000492455 WT1-ASQ06250 92 aa-0.33□□□□□ -2.46
HMGB1P30-201ENST00000492455 ABRACLQ9P1F3 81 aa-0.33□□□□□ -2.46
HMGB1P30-201ENST00000492455 NBEAL2Q6ZNJ1 2754 aa-0.33□□□□□ -2.46
HMGB1P30-201ENST00000492455 NWD1Q149M9 1564 aa-0.33□□□□□ -2.46
HMGB1P30-201ENST00000492455 THOC2Q8NI27 1593 aaKnown RBP-0.33□□□□□ -2.46
HMGB1P30-201ENST00000492455 RIF1Q5UIP0 2472 aaKnown RBP-0.33□□□□□ -2.46
HMGB1P30-201ENST00000492455 USP9XQ93008 2570 aaPredicted RBP-0.34□□□□□ -2.46
HMGB1P30-201ENST00000492455 DNAH3Q8TD57 4116 aa-0.34□□□□□ -2.46
HMGB1P30-201ENST00000492455 ETDCA0A1B0GVM5 59 aa-0.34□□□□□ -2.46
HMGB1P30-201ENST00000492455 H3BUT2 72 aa-0.34□□□□□ -2.46
HMGB1P30-201ENST00000492455 MT1EP04732 61 aa-0.34□□□□□ -2.46
HMGB1P30-201ENST00000492455 GNG2P59768 71 aa-0.34□□□□□ -2.46
HMGB1P30-201ENST00000492455 GNG13Q9P2W3 67 aa-0.34□□□□□ -2.46
HMGB1P30-201ENST00000492455 ABCC3O15438 1527 aa-0.34□□□□□ -2.46
HMGB1P30-201ENST00000492455 NBPF19A0A087WUL8 3843 aa-0.34□□□□□ -2.46
HMGB1P30-201ENST00000492455 FAM186AA6NE01 2351 aa-0.34□□□□□ -2.46
HMGB1P30-201ENST00000492455 AKAP9Q99996 3911 aa-0.34□□□□□ -2.46
HMGB1P30-201ENST00000492455 COL6A5A8TX70 2615 aa-0.34□□□□□ -2.46
HMGB1P30-201ENST00000492455 COL12A1Q99715 3063 aa-0.35□□□□□ -2.47
HMGB1P30-201ENST00000492455 DNAH2Q9P225 4427 aa-0.35□□□□□ -2.47
HMGB1P30-201ENST00000492455 SMR3BP02814 79 aaPredicted RBP-0.35□□□□□ -2.47
HMGB1P30-201ENST00000492455 MT1FP04733 61 aa-0.35□□□□□ -2.47
HMGB1P30-201ENST00000492455 KRTAP19-5Q3LI72 72 aa-0.35□□□□□ -2.47
HMGB1P30-201ENST00000492455 KRTAP8-1Q8IUC2 63 aa-0.35□□□□□ -2.47
HMGB1P30-201ENST00000492455 MT1LQ93083 61 aa-0.35□□□□□ -2.47
HMGB1P30-201ENST00000492455 CMYA5Q8N3K9 4069 aa-0.35□□□□□ -2.47
HMGB1P30-201ENST00000492455 DNAH7Q8WXX0 4024 aa-0.35□□□□□ -2.47
HMGB1P30-201ENST00000492455 LTN1O94822 1766 aa-0.35□□□□□ -2.47
HMGB1P30-201ENST00000492455 NESP48681 1621 aa-0.35□□□□□ -2.47
HMGB1P30-201ENST00000492455 MYO3AQ8NEV4 1616 aa-0.35□□□□□ -2.47
HMGB1P30-201ENST00000492455 USP32Q8NFA0 1604 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms