RNA–Protein interactions for RNA: ENST00000490615.1

SHTN1-205, Transcript of shootin 1, humanhuman

TSL 3

Gene SHTN1, Length 358 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-205ENST00000490615 SORL1Q92673 2214 aa2.82□□□□□ -1.96
SHTN1-205ENST00000490615 ACACAQ13085 2346 aa2.82□□□□□ -1.96
SHTN1-205ENST00000490615 ABCA2Q9BZC7 2435 aa2.82□□□□□ -1.96
SHTN1-205ENST00000490615 REV3LO60673 3130 aa2.82□□□□□ -1.96
SHTN1-205ENST00000490615 TRIOBPQ9H2D6 2365 aa2.81□□□□□ -1.96
SHTN1-205ENST00000490615 PIEZO2Q9H5I5 2752 aa2.81□□□□□ -1.96
SHTN1-205ENST00000490615 NBEAQ8NFP9 2946 aa2.81□□□□□ -1.96
SHTN1-205ENST00000490615 A0A1B0GU69 56 aa2.81□□□□□ -1.96
SHTN1-205ENST00000490615 WNK1Q9H4A3 2382 aa2.8□□□□□ -1.96
SHTN1-205ENST00000490615 MRPL34Q9BQ48 92 aaKnown RBP2.8□□□□□ -1.96
SHTN1-205ENST00000490615 TNRC18O15417 2968 aaPredicted RBP2.79□□□□□ -1.96
SHTN1-205ENST00000490615 CREBBPQ92793 2442 aa2.79□□□□□ -1.96
SHTN1-205ENST00000490615 KRTAP11-1Q8IUC1 163 aa2.79□□□□□ -1.96
SHTN1-205ENST00000490615 ANAPC11Q9NYG5 84 aa2.79□□□□□ -1.96
SHTN1-205ENST00000490615 LAMA1P25391 3075 aa2.79□□□□□ -1.96
SHTN1-205ENST00000490615 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.79□□□□□ -1.96
SHTN1-205ENST00000490615 A0A1W2PNN7 141 aa2.78□□□□□ -1.96
SHTN1-205ENST00000490615 LAMA2P24043 3122 aaKnown RBP2.77□□□□□ -1.97
SHTN1-205ENST00000490615 R4GN34 69 aa2.77□□□□□ -1.97
SHTN1-205ENST00000490615 SPTAN1Q13813 2472 aaKnown RBP2.77□□□□□ -1.97
SHTN1-205ENST00000490615 XIRP2A4UGR9 3374 aa2.77□□□□□ -1.97
SHTN1-205ENST00000490615 SPTA1P02549 2419 aa2.76□□□□□ -1.97
SHTN1-205ENST00000490615 PRLHP81277 87 aa2.76□□□□□ -1.97
SHTN1-205ENST00000490615 TPRXLQ17RH7 258 aa2.76□□□□□ -1.97
SHTN1-205ENST00000490615 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
SHTN1-205ENST00000490615 Q96NJ1 140 aa2.76□□□□□ -1.97
SHTN1-205ENST00000490615 TRIOO75962 3097 aa2.76□□□□□ -1.97
SHTN1-205ENST00000490615 FRYQ5TBA9 3013 aa2.76□□□□□ -1.97
SHTN1-205ENST00000490615 AKAP6Q13023 2319 aa2.75□□□□□ -1.97
SHTN1-205ENST00000490615 DSPP15924 2871 aaKnown RBP2.75□□□□□ -1.97
SHTN1-205ENST00000490615 SPACA4Q8TDM5 124 aa2.74□□□□□ -1.97
SHTN1-205ENST00000490615 CDH23Q9H251 3354 aa2.74□□□□□ -1.97
SHTN1-205ENST00000490615 A0A0G2JQZ4 141 aa2.73□□□□□ -1.97
SHTN1-205ENST00000490615 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
SHTN1-205ENST00000490615 SPINT4Q6UDR6 99 aa2.73□□□□□ -1.97
SHTN1-205ENST00000490615 C2CD3Q4AC94 2353 aa2.73□□□□□ -1.97
SHTN1-205ENST00000490615 TLN1Q9Y490 2541 aaKnown RBP2.73□□□□□ -1.97
SHTN1-205ENST00000490615 ANKRD11Q6UB99 2663 aaPredicted RBP2.73□□□□□ -1.97
SHTN1-205ENST00000490615 VCANP13611 3396 aa2.72□□□□□ -1.97
SHTN1-205ENST00000490615 ZFHX2Q9C0A1 2572 aaPredicted RBP2.72□□□□□ -1.97
SHTN1-205ENST00000490615 PRRC2CQ9Y520 2896 aaKnown RBP2.72□□□□□ -1.97
SHTN1-205ENST00000490615 LAMA3Q16787 3333 aa2.72□□□□□ -1.97
SHTN1-205ENST00000490615 A0A096LNI7 61 aa2.72□□□□□ -1.97
SHTN1-205ENST00000490615 CFAP54Q96N23 3096 aa2.72□□□□□ -1.97
SHTN1-205ENST00000490615 USP34Q70CQ2 3546 aa2.71□□□□□ -1.98
SHTN1-205ENST00000490615 COL6A3P12111 3177 aa2.71□□□□□ -1.98
SHTN1-205ENST00000490615 FRYLO94915 3013 aa2.71□□□□□ -1.98
SHTN1-205ENST00000490615 CSPG4Q6UVK1 2322 aa2.7□□□□□ -1.98
SHTN1-205ENST00000490615 LINC00304Q8N9R0 145 aa2.7□□□□□ -1.98
SHTN1-205ENST00000490615 HIVEP3Q5T1R4 2406 aa2.69□□□□□ -1.98
SHTN1-205ENST00000490615 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
SHTN1-205ENST00000490615 KALRNO60229 2985 aa2.69□□□□□ -1.98
SHTN1-205ENST00000490615 VPS13AQ96RL7 3174 aa2.68□□□□□ -1.98
SHTN1-205ENST00000490615 SPTBN5Q9NRC6 3674 aaKnown RBP2.68□□□□□ -1.98
SHTN1-205ENST00000490615 SSBP3-AS1Q7Z2R9 100 aa2.68□□□□□ -1.98
SHTN1-205ENST00000490615 KRTAP13-1Q8IUC0 172 aa2.68□□□□□ -1.98
SHTN1-205ENST00000490615 HRNRQ86YZ3 2850 aaPredicted RBP2.68□□□□□ -1.98
SHTN1-205ENST00000490615 PRUNE2Q8WUY3 3088 aa2.67□□□□□ -1.98
SHTN1-205ENST00000490615 FREM2Q5SZK8 3169 aa2.67□□□□□ -1.98
SHTN1-205ENST00000490615 KRTAP12-2P59991 146 aa2.67□□□□□ -1.98
SHTN1-205ENST00000490615 KRTAP13-3Q3SY46 172 aa2.67□□□□□ -1.98
SHTN1-205ENST00000490615 UBE2DNLQ8IWF7 75 aa2.67□□□□□ -1.98
SHTN1-205ENST00000490615 WDFY3Q8IZQ1 3526 aa2.67□□□□□ -1.98
SHTN1-205ENST00000490615 GVINP1Q7Z2Y8 2422 aa2.66□□□□□ -1.98
SHTN1-205ENST00000490615 LY6G6CO95867 125 aa2.66□□□□□ -1.98
SHTN1-205ENST00000490615 SPEGQ15772 3267 aa2.64□□□□□ -1.99
SHTN1-205ENST00000490615 BDP1A6H8Y1 2624 aa2.64□□□□□ -1.99
SHTN1-205ENST00000490615 TACC2O95359 2948 aa2.64□□□□□ -1.99
SHTN1-205ENST00000490615 AKAP13Q12802 2813 aa2.64□□□□□ -1.99
SHTN1-205ENST00000490615 CFAP47Q6ZTR5 3102 aa2.64□□□□□ -1.99
SHTN1-205ENST00000490615 DOPEY1Q5JWR5 2465 aa2.64□□□□□ -1.99
SHTN1-205ENST00000490615 NBASA2RRP1 2371 aa2.64□□□□□ -1.99
SHTN1-205ENST00000490615 DMXL2Q8TDJ6 3036 aa2.63□□□□□ -1.99
SHTN1-205ENST00000490615 INE1O15225 51 aa2.63□□□□□ -1.99
SHTN1-205ENST00000490615 SPINK6Q6UWN8 80 aa2.63□□□□□ -1.99
SHTN1-205ENST00000490615 ANKRD17O75179 2603 aaKnown RBP2.62□□□□□ -1.99
SHTN1-205ENST00000490615 RIF1Q5UIP0 2472 aaKnown RBP2.62□□□□□ -1.99
SHTN1-205ENST00000490615 SPG11Q96JI7 2443 aa2.61□□□□□ -1.99
SHTN1-205ENST00000490615 LRBAP50851 2863 aa2.61□□□□□ -1.99
SHTN1-205ENST00000490615 WDFY4Q6ZS81 3184 aa2.61□□□□□ -1.99
SHTN1-205ENST00000490615 K7EIL1 84 aa2.61□□□□□ -1.99
SHTN1-205ENST00000490615 TLN2Q9Y4G6 2542 aa2.61□□□□□ -1.99
SHTN1-205ENST00000490615 MAP1AP78559 2803 aaPredicted RBP2.6□□□□□ -1.99
SHTN1-205ENST00000490615 ADGRG4Q8IZF6 3080 aa2.6□□□□□ -1.99
SHTN1-205ENST00000490615 ZNF292O60281 2723 aa2.6□□□□□ -1.99
SHTN1-205ENST00000490615 CELSR3Q9NYQ7 3312 aa2.6□□□□□ -1.99
SHTN1-205ENST00000490615 CEP295Q9C0D2 2601 aa2.59□□□□□ -1.99
SHTN1-205ENST00000490615 DCHS2Q6V1P9 2916 aa2.59□□□□□ -1.99
SHTN1-205ENST00000490615 MGAQ8IWI9 3026 aa2.59□□□□□ -2
SHTN1-205ENST00000490615 MYO9AB2RTY4 2548 aa2.58□□□□□ -2
SHTN1-205ENST00000490615 NCOR2Q9Y618 2525 aa2.57□□□□□ -2
SHTN1-205ENST00000490615 H1FX-AS1Q4G0G2 97 aa2.57□□□□□ -2
SHTN1-205ENST00000490615 KRTAP13-2Q52LG2 175 aa2.57□□□□□ -2
SHTN1-205ENST00000490615 APLNQ9ULZ1 77 aa2.57□□□□□ -2
SHTN1-205ENST00000490615 MYO15AQ9UKN7 3530 aa2.57□□□□□ -2
SHTN1-205ENST00000490615 FN1P02751 2386 aaKnown RBP2.57□□□□□ -2
SHTN1-205ENST00000490615 NAV2Q8IVL1 2488 aa2.57□□□□□ -2
SHTN1-205ENST00000490615 HIVEP2P31629 2446 aa2.56□□□□□ -2
SHTN1-205ENST00000490615 KRTAP10-8P60410 259 aa2.56□□□□□ -2
SHTN1-205ENST00000490615 COX6B2Q6YFQ2 88 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms