RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 LPAP08519 4548 aa8.33□□□□□ -1.08
SRGAP3-208ENST00000490348 F8W1H4 67 aa8.32□□□□□ -1.08
SRGAP3-208ENST00000490348 Q8NBF4 154 aa8.32□□□□□ -1.08
SRGAP3-208ENST00000490348 VPS25Q9BRG1 176 aa8.32□□□□□ -1.08
SRGAP3-208ENST00000490348 IGLV5-48A0A075B6I7 105 aa8.31□□□□□ -1.08
SRGAP3-208ENST00000490348 DEFB105AQ8NG35 78 aa8.31□□□□□ -1.08
SRGAP3-208ENST00000490348 SMIM29Q86T20 159 aa8.3□□□□□ -1.08
SRGAP3-208ENST00000490348 TEX49A0A1B0GTD5 131 aa8.29□□□□□ -1.08
SRGAP3-208ENST00000490348 PCP4P48539 62 aa8.29□□□□□ -1.08
SRGAP3-208ENST00000490348 Q8N377 158 aa8.29□□□□□ -1.08
SRGAP3-208ENST00000490348 hADV29S1A0JD25 119 aa8.28□□□□□ -1.08
SRGAP3-208ENST00000490348 J3QR89 54 aa8.28□□□□□ -1.08
SRGAP3-208ENST00000490348 SLC25A20O43772 301 aa8.28□□□□□ -1.08
SRGAP3-208ENST00000490348 Q1RN00 199 aa8.27□□□□□ -1.09
SRGAP3-208ENST00000490348 C9orf153Q5TBE3 101 aa8.27□□□□□ -1.09
SRGAP3-208ENST00000490348 SSBP3-AS1Q7Z2R9 100 aa8.27□□□□□ -1.09
SRGAP3-208ENST00000490348 FAM218AQ96MZ4 157 aa8.27□□□□□ -1.09
SRGAP3-208ENST00000490348 TRIAP1O43715 76 aa8.27□□□□□ -1.09
SRGAP3-208ENST00000490348 Q6ZQY7 126 aa8.27□□□□□ -1.09
SRGAP3-208ENST00000490348 LAMTOR3Q9UHA4 124 aa8.25□□□□□ -1.09
SRGAP3-208ENST00000490348 TRBV20-1A0A075B6N2 111 aa8.24□□□□□ -1.09
SRGAP3-208ENST00000490348 SPAG11AQ6PDA7 123 aa8.24□□□□□ -1.09
SRGAP3-208ENST00000490348 H0YGX0 51 aa8.23□□□□□ -1.09
SRGAP3-208ENST00000490348 H3BMG7 143 aa8.22□□□□□ -1.09
SRGAP3-208ENST00000490348 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.22□□□□□ -1.09
SRGAP3-208ENST00000490348 RETNLBQ9BQ08 111 aa8.22□□□□□ -1.09
SRGAP3-208ENST00000490348 PRO0461Q9UI25 63 aa8.22□□□□□ -1.09
SRGAP3-208ENST00000490348 C4orf48Q5BLP8 95 aa8.22□□□□□ -1.09
SRGAP3-208ENST00000490348 SPINK1P00995 79 aa8.21□□□□□ -1.1
SRGAP3-208ENST00000490348 PRR4Q16378 134 aa8.2□□□□□ -1.1
SRGAP3-208ENST00000490348 CLEC2BQ92478 149 aa8.2□□□□□ -1.1
SRGAP3-208ENST00000490348 A0A0G2JQZ4 141 aa8.19□□□□□ -1.1
SRGAP3-208ENST00000490348 PSMB2P49721 201 aa8.18□□□□□ -1.1
SRGAP3-208ENST00000490348 RPS29P62273 56 aaKnown RBP8.17□□□□□ -1.1
SRGAP3-208ENST00000490348 RNF213Q63HN8 5207 aa8.16□□□□□ -1.1
SRGAP3-208ENST00000490348 A0A1B0GX51 115 aa8.16□□□□□ -1.1
SRGAP3-208ENST00000490348 SCGB1A1P11684 91 aa8.16□□□□□ -1.1
SRGAP3-208ENST00000490348 ETDBQ3ZM63 59 aa8.16□□□□□ -1.1
SRGAP3-208ENST00000490348 HRCT1Q6UXD1 115 aa8.16□□□□□ -1.1
SRGAP3-208ENST00000490348 C21orf62-AS1Q17RA5 79 aa8.15□□□□□ -1.1
SRGAP3-208ENST00000490348 PPDPFLQ8WWR9 84 aa8.15□□□□□ -1.1
SRGAP3-208ENST00000490348 SCGB1C2P0DMR2 95 aa8.14□□□□□ -1.11
SRGAP3-208ENST00000490348 IGLV8-61A0A075B6I0 122 aa8.14□□□□□ -1.11
SRGAP3-208ENST00000490348 TCL1BO95988 128 aa8.14□□□□□ -1.11
SRGAP3-208ENST00000490348 SNCGO76070 127 aa8.13□□□□□ -1.11
SRGAP3-208ENST00000490348 COX6CP09669 75 aa8.13□□□□□ -1.11
SRGAP3-208ENST00000490348 TEN1Q86WV5 123 aa8.13□□□□□ -1.11
SRGAP3-208ENST00000490348 SIGMAR1Q99720 223 aa8.13□□□□□ -1.11
SRGAP3-208ENST00000490348 F8WEM9 126 aa8.12□□□□□ -1.11
SRGAP3-208ENST00000490348 SMCPP49901 116 aaPredicted RBP8.12□□□□□ -1.11
SRGAP3-208ENST00000490348 ATXN8Q156A1 80 aa8.12□□□□□ -1.11
SRGAP3-208ENST00000490348 CD164Q04900 197 aa8.11□□□□□ -1.11
SRGAP3-208ENST00000490348 IGFL1Q6UW32 110 aa8.1□□□□□ -1.11
SRGAP3-208ENST00000490348 IGLV7-46A0A075B6I9 117 aa8.1□□□□□ -1.11
SRGAP3-208ENST00000490348 LST1O00453 97 aa8.09□□□□□ -1.11
SRGAP3-208ENST00000490348 DNAL4O96015 105 aa8.08□□□□□ -1.12
SRGAP3-208ENST00000490348 NDUFV3P56181 108 aaKnown RBP8.08□□□□□ -1.12
SRGAP3-208ENST00000490348 FP248Q71RG6 208 aaPredicted RBP8.08□□□□□ -1.12
SRGAP3-208ENST00000490348 MTURNQ8N3F0 131 aa8.08□□□□□ -1.12
SRGAP3-208ENST00000490348 Q6JHZ5 121 aa8.07□□□□□ -1.12
SRGAP3-208ENST00000490348 TRACP01848 142 aa8.06□□□□□ -1.12
SRGAP3-208ENST00000490348 ORMDL1Q9P0S3 153 aa8.06□□□□□ -1.12
SRGAP3-208ENST00000490348 TPRXLQ17RH7 258 aa8.05□□□□□ -1.12
SRGAP3-208ENST00000490348 Q5XG85 94 aa8.05□□□□□ -1.12
SRGAP3-208ENST00000490348 LIMD2Q9BT23 127 aa8.05□□□□□ -1.12
SRGAP3-208ENST00000490348 MUC2Q02817 5179 aa8.05□□□□□ -1.12
SRGAP3-208ENST00000490348 C9JAW5 83 aa8.05□□□□□ -1.12
SRGAP3-208ENST00000490348 ANKRD29Q8N6D5 301 aa8.05□□□□□ -1.12
SRGAP3-208ENST00000490348 H3BT86 120 aa8.04□□□□□ -1.12
SRGAP3-208ENST00000490348 GHRHP01286 108 aa8.03□□□□□ -1.12
SRGAP3-208ENST00000490348 KRTAP13-3Q3SY46 172 aa8.02□□□□□ -1.13
SRGAP3-208ENST00000490348 TRBV7-7A0A0K0K1E9 115 aa8.01□□□□□ -1.13
SRGAP3-208ENST00000490348 TMEM256-PLSCR3K7ERE1 68 aa8.01□□□□□ -1.13
SRGAP3-208ENST00000490348 CDIP1Q9H305 208 aa8.01□□□□□ -1.13
SRGAP3-208ENST00000490348 A0A1B0GV72 72 aa8□□□□□ -1.13
SRGAP3-208ENST00000490348 H3BQ85 93 aa8□□□□□ -1.13
SRGAP3-208ENST00000490348 C1orf195Q5TG92 126 aa8□□□□□ -1.13
SRGAP3-208ENST00000490348 Q6Q795 121 aa7.98□□□□□ -1.13
SRGAP3-208ENST00000490348 MUC17Q685J3 4493 aa7.97□□□□□ -1.13
SRGAP3-208ENST00000490348 BAALC-AS2P0C853 105 aa7.97□□□□□ -1.13
SRGAP3-208ENST00000490348 A0A1W2PNM2 257 aa7.96□□□□□ -1.14
SRGAP3-208ENST00000490348 FAM240AA0A1B0GVK7 77 aa7.95□□□□□ -1.14
SRGAP3-208ENST00000490348 ASB16-AS1Q495Z4 193 aa7.95□□□□□ -1.14
SRGAP3-208ENST00000490348 LCE2DQ5TA82 110 aaPredicted RBP7.93□□□□□ -1.14
SRGAP3-208ENST00000490348 TRBV7-4A0A0J9YYF1 115 aa7.92□□□□□ -1.14
SRGAP3-208ENST00000490348 A0A087WSZ3 146 aa7.91□□□□□ -1.14
SRGAP3-208ENST00000490348 MT-ATP8P03928 68 aa7.91□□□□□ -1.14
SRGAP3-208ENST00000490348 ACYP1P07311 99 aa7.89□□□□□ -1.15
SRGAP3-208ENST00000490348 RBM3P98179 157 aaKnown RBP7.89□□□□□ -1.15
SRGAP3-208ENST00000490348 XP32Q5T750 250 aa7.88□□□□□ -1.15
SRGAP3-208ENST00000490348 C9orf92A6NGG3 77 aa7.88□□□□□ -1.15
SRGAP3-208ENST00000490348 CCKP06307 115 aa7.88□□□□□ -1.15
SRGAP3-208ENST00000490348 Q96NJ1 140 aa7.87□□□□□ -1.15
SRGAP3-208ENST00000490348 SS18L2Q9UHA2 77 aa7.87□□□□□ -1.15
SRGAP3-208ENST00000490348 DSCR8Q96T75 97 aa7.85□□□□□ -1.15
SRGAP3-208ENST00000490348 OBSCN-AS1Q96MR7 158 aa7.84□□□□□ -1.15
SRGAP3-208ENST00000490348 JMJD7-PLA2G4BH0Y9G9 81 aa7.83□□□□□ -1.16
SRGAP3-208ENST00000490348 Q6ZQT0 140 aa7.82□□□□□ -1.16
SRGAP3-208ENST00000490348 LOC110117498A0A087WWA1 95 aa7.81□□□□□ -1.16
SRGAP3-208ENST00000490348 C14orf132Q9NPU4 83 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms