RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 ZFHX3Q15911 3703 aa1.4□□□□□ -2.19
TM9SF3-206ENST00000490192 EP300Q09472 2414 aaPredicted RBP1.4□□□□□ -2.19
TM9SF3-206ENST00000490192 IGF2RP11717 2491 aa1.39□□□□□ -2.19
TM9SF3-206ENST00000490192 A0A1B0GUT8 65 aa1.39□□□□□ -2.19
TM9SF3-206ENST00000490192 DEFB1P60022 68 aa1.39□□□□□ -2.19
TM9SF3-206ENST00000490192 ST20Q9HBF5 79 aa1.39□□□□□ -2.19
TM9SF3-206ENST00000490192 RABAC1Q9UI14 185 aa1.39□□□□□ -2.19
TM9SF3-206ENST00000490192 CEP250Q9BV73 2442 aa1.39□□□□□ -2.19
TM9SF3-206ENST00000490192 FRYQ5TBA9 3013 aa1.39□□□□□ -2.19
TM9SF3-206ENST00000490192 DMXL1Q9Y485 3027 aa1.39□□□□□ -2.19
TM9SF3-206ENST00000490192 LOC400499M0QZD8 3231 aa1.38□□□□□ -2.19
TM9SF3-206ENST00000490192 CFAP47Q6ZTR5 3102 aa1.38□□□□□ -2.19
TM9SF3-206ENST00000490192 APC2O95996 2303 aa1.38□□□□□ -2.19
TM9SF3-206ENST00000490192 D6R8Y8 96 aa1.38□□□□□ -2.19
TM9SF3-206ENST00000490192 H3BUA1 57 aa1.38□□□□□ -2.19
TM9SF3-206ENST00000490192 K7EP34 96 aa1.38□□□□□ -2.19
TM9SF3-206ENST00000490192 NDUFA4O00483 81 aa1.38□□□□□ -2.19
TM9SF3-206ENST00000490192 LEPROTL1O95214 131 aa1.38□□□□□ -2.19
TM9SF3-206ENST00000490192 IFI27P40305 119 aaPredicted RBP1.38□□□□□ -2.19
TM9SF3-206ENST00000490192 ETDBQ3ZM63 59 aa1.38□□□□□ -2.19
TM9SF3-206ENST00000490192 SPCS1Q9Y6A9 102 aa1.38□□□□□ -2.19
TM9SF3-206ENST00000490192 TLN1Q9Y490 2541 aaKnown RBP1.38□□□□□ -2.19
TM9SF3-206ENST00000490192 CFAP46Q8IYW2 2715 aa1.38□□□□□ -2.19
TM9SF3-206ENST00000490192 BSNQ9UPA5 3926 aa1.37□□□□□ -2.19
TM9SF3-206ENST00000490192 NCOR2Q9Y618 2525 aa1.37□□□□□ -2.19
TM9SF3-206ENST00000490192 HRNRQ86YZ3 2850 aaPredicted RBP1.37□□□□□ -2.19
TM9SF3-206ENST00000490192 F8WEM9 126 aa1.37□□□□□ -2.19
TM9SF3-206ENST00000490192 H3BUX3 64 aa1.37□□□□□ -2.19
TM9SF3-206ENST00000490192 COX8AP10176 69 aa1.37□□□□□ -2.19
TM9SF3-206ENST00000490192 FCER1GP30273 86 aa1.37□□□□□ -2.19
TM9SF3-206ENST00000490192 DEFB112Q30KQ8 113 aa1.37□□□□□ -2.19
TM9SF3-206ENST00000490192 BVES-AS1Q5T3Y7 98 aa1.37□□□□□ -2.19
TM9SF3-206ENST00000490192 USMG5Q96IX5 58 aa1.37□□□□□ -2.19
TM9SF3-206ENST00000490192 CACNA1AO00555 2505 aa1.37□□□□□ -2.19
TM9SF3-206ENST00000490192 PIEZO1Q92508 2521 aa1.37□□□□□ -2.19
TM9SF3-206ENST00000490192 MGAQ8IWI9 3026 aa1.37□□□□□ -2.19
TM9SF3-206ENST00000490192 DNAJC13O75165 2243 aa1.36□□□□□ -2.19
TM9SF3-206ENST00000490192 LAMA5O15230 3695 aa1.36□□□□□ -2.19
TM9SF3-206ENST00000490192 ANKHD1Q8IWZ3 2542 aaKnown RBP1.36□□□□□ -2.19
TM9SF3-206ENST00000490192 A8MTW9 85 aa1.36□□□□□ -2.19
TM9SF3-206ENST00000490192 H3BVH4 76 aa1.36□□□□□ -2.19
TM9SF3-206ENST00000490192 RPL39LQ96EH5 51 aaKnown RBP1.36□□□□□ -2.19
TM9SF3-206ENST00000490192 SMIM2Q9BVW6 85 aa1.36□□□□□ -2.19
TM9SF3-206ENST00000490192 RHPN1-AS1Q9BWJ2 59 aa1.36□□□□□ -2.19
TM9SF3-206ENST00000490192 PRO0255Q9UI72 69 aa1.36□□□□□ -2.19
TM9SF3-206ENST00000490192 ZZEF1O43149 2961 aa1.36□□□□□ -2.19
TM9SF3-206ENST00000490192 SMG1Q96Q15 3661 aaKnown RBP1.36□□□□□ -2.19
TM9SF3-206ENST00000490192 BOD1L1Q8NFC6 3051 aa1.36□□□□□ -2.19
TM9SF3-206ENST00000490192 NBEAQ8NFP9 2946 aa1.36□□□□□ -2.19
TM9SF3-206ENST00000490192 PKD1L2Q7Z442 2459 aa1.35□□□□□ -2.19
TM9SF3-206ENST00000490192 DCHS1Q96JQ0 3298 aa1.35□□□□□ -2.19
TM9SF3-206ENST00000490192 KALRNO60229 2985 aa1.35□□□□□ -2.19
TM9SF3-206ENST00000490192 DSPP15924 2871 aaKnown RBP1.35□□□□□ -2.19
TM9SF3-206ENST00000490192 NOTCH1P46531 2555 aa1.35□□□□□ -2.19
TM9SF3-206ENST00000490192 UBR5O95071 2799 aaPredicted RBP1.35□□□□□ -2.19
TM9SF3-206ENST00000490192 PIEZO2Q9H5I5 2752 aa1.35□□□□□ -2.19
TM9SF3-206ENST00000490192 TRAV21A0A0B4J279 112 aa1.35□□□□□ -2.19
TM9SF3-206ENST00000490192 IGIPA6NJ69 53 aa1.35□□□□□ -2.19
TM9SF3-206ENST00000490192 COX6B1P14854 86 aa1.35□□□□□ -2.19
TM9SF3-206ENST00000490192 POLR2KP53803 58 aaKnown RBP1.35□□□□□ -2.19
TM9SF3-206ENST00000490192 DOPEY1Q5JWR5 2465 aa1.35□□□□□ -2.19
TM9SF3-206ENST00000490192 PTPRQQ9UMZ3 2332 aa1.35□□□□□ -2.19
TM9SF3-206ENST00000490192 DMXL2Q8TDJ6 3036 aa1.35□□□□□ -2.19
TM9SF3-206ENST00000490192 ATMQ13315 3056 aa1.35□□□□□ -2.19
TM9SF3-206ENST00000490192 FAM186AA6NE01 2351 aa1.35□□□□□ -2.19
TM9SF3-206ENST00000490192 IGSF10Q6WRI0 2623 aa1.34□□□□□ -2.19
TM9SF3-206ENST00000490192 K7EMI3 77 aa1.34□□□□□ -2.19
TM9SF3-206ENST00000490192 M0QY20 66 aa1.34□□□□□ -2.19
TM9SF3-206ENST00000490192 DEFB136Q30KP8 78 aa1.34□□□□□ -2.19
TM9SF3-206ENST00000490192 TP53AIP1Q9HCN2 124 aa1.34□□□□□ -2.19
TM9SF3-206ENST00000490192 TIMM8BQ9Y5J9 83 aaPredicted RBP1.34□□□□□ -2.19
TM9SF3-206ENST00000490192 RIF1Q5UIP0 2472 aaKnown RBP1.34□□□□□ -2.2
TM9SF3-206ENST00000490192 ADGRG4Q8IZF6 3080 aa1.34□□□□□ -2.2
TM9SF3-206ENST00000490192 RELNP78509 3460 aa1.34□□□□□ -2.2
TM9SF3-206ENST00000490192 CHD8Q9HCK8 2581 aa1.34□□□□□ -2.2
TM9SF3-206ENST00000490192 USF3Q68DE3 2245 aa1.34□□□□□ -2.2
TM9SF3-206ENST00000490192 PTPRZ1P23471 2315 aaPredicted RBP1.33□□□□□ -2.2
TM9SF3-206ENST00000490192 PLCE1Q9P212 2302 aa1.33□□□□□ -2.2
TM9SF3-206ENST00000490192 CNOT1A5YKK6 2376 aaKnown RBP1.33□□□□□ -2.2
TM9SF3-206ENST00000490192 USP24Q9UPU5 2620 aa1.33□□□□□ -2.2
TM9SF3-206ENST00000490192 PRRC2CQ9Y520 2896 aaKnown RBP1.33□□□□□ -2.2
TM9SF3-206ENST00000490192 PLNP26678 52 aa1.33□□□□□ -2.2
TM9SF3-206ENST00000490192 DEFB131AP59861 70 aa1.33□□□□□ -2.2
TM9SF3-206ENST00000490192 RPL39P62891 51 aaKnown RBP1.33□□□□□ -2.2
TM9SF3-206ENST00000490192 DEFB114Q30KQ6 69 aa1.33□□□□□ -2.2
TM9SF3-206ENST00000490192 DCHS2Q6V1P9 2916 aa1.33□□□□□ -2.2
TM9SF3-206ENST00000490192 USP9XQ93008 2570 aaPredicted RBP1.33□□□□□ -2.2
TM9SF3-206ENST00000490192 ABCA2Q9BZC7 2435 aa1.32□□□□□ -2.2
TM9SF3-206ENST00000490192 MYMXA0A1B0GTQ4 84 aa1.32□□□□□ -2.2
TM9SF3-206ENST00000490192 H3BUT2 72 aa1.32□□□□□ -2.2
TM9SF3-206ENST00000490192 DEFB104AQ8WTQ1 72 aa1.32□□□□□ -2.2
TM9SF3-206ENST00000490192 MAP1BP46821 2468 aaKnown RBP1.32□□□□□ -2.2
TM9SF3-206ENST00000490192 PKDREJQ9NTG1 2253 aa1.32□□□□□ -2.2
TM9SF3-206ENST00000490192 SPTBN2O15020 2390 aa1.32□□□□□ -2.2
TM9SF3-206ENST00000490192 FLNCQ14315 2725 aa1.31□□□□□ -2.2
TM9SF3-206ENST00000490192 SPTA1P02549 2419 aa1.31□□□□□ -2.2
TM9SF3-206ENST00000490192 LINC01549A6NIU2 74 aa1.31□□□□□ -2.2
TM9SF3-206ENST00000490192 I3L3M4 83 aa1.31□□□□□ -2.2
TM9SF3-206ENST00000490192 SMIM13P0DJ93 91 aa1.31□□□□□ -2.2
TM9SF3-206ENST00000490192 UBE2D4Q9Y2X8 147 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms