RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 CASC2Q6XLA1 102 aa2.53□□□□□ -2
RTN1-207ENST00000490111 PPP1R1CQ8WVI7 109 aa2.53□□□□□ -2
RTN1-207ENST00000490111 PMCHL2Q9BQD1 86 aa2.53□□□□□ -2
RTN1-207ENST00000490111 C20orf78Q9BR46 151 aa2.53□□□□□ -2
RTN1-207ENST00000490111 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2
RTN1-207ENST00000490111 LENEPQ9Y5L5 61 aa2.53□□□□□ -2
RTN1-207ENST00000490111 ARL2-SNX15V9GYD0 113 aa2.53□□□□□ -2
RTN1-207ENST00000490111 TRBV7-7A0A0K0K1E9 115 aa2.52□□□□□ -2.01
RTN1-207ENST00000490111 HMSDA8MTL9 139 aa2.52□□□□□ -2.01
RTN1-207ENST00000490111 GCHFRP30047 84 aa2.52□□□□□ -2.01
RTN1-207ENST00000490111 UBE2G1P62253 170 aa2.52□□□□□ -2.01
RTN1-207ENST00000490111 S100A7L2Q5SY68 101 aa2.52□□□□□ -2.01
RTN1-207ENST00000490111 Q86TA4 180 aa2.52□□□□□ -2.01
RTN1-207ENST00000490111 TMEM254Q8TBM7 123 aa2.52□□□□□ -2.01
RTN1-207ENST00000490111 HIGD2AQ9BW72 106 aa2.52□□□□□ -2.01
RTN1-207ENST00000490111 LINC00474Q9P2X8 69 aa2.52□□□□□ -2.01
RTN1-207ENST00000490111 UQCR10Q9UDW1 63 aa2.52□□□□□ -2.01
RTN1-207ENST00000490111 TRBV6-8A0A0A6YYG3 113 aa2.51□□□□□ -2.01
RTN1-207ENST00000490111 IGKV2-24A0A0C4DH68 120 aa2.51□□□□□ -2.01
RTN1-207ENST00000490111 ERC2-IT1O76042 136 aa2.51□□□□□ -2.01
RTN1-207ENST00000490111 UBE2D3P61077 147 aa2.51□□□□□ -2.01
RTN1-207ENST00000490111 UBE2D2P62837 147 aa2.51□□□□□ -2.01
RTN1-207ENST00000490111 ZNF56Q15929 161 aa2.51□□□□□ -2.01
RTN1-207ENST00000490111 OR10AG1Q8NH19 301 aa2.51□□□□□ -2.01
RTN1-207ENST00000490111 MRPL35Q9NZE8 188 aaKnown RBP2.51□□□□□ -2.01
RTN1-207ENST00000490111 IGLV4-60A0A075B6I1 120 aa2.5□□□□□ -2.01
RTN1-207ENST00000490111 A0A087WWC5 75 aa2.5□□□□□ -2.01
RTN1-207ENST00000490111 TRAV12-1A0A0B4J245 112 aa2.5□□□□□ -2.01
RTN1-207ENST00000490111 IGKV3OR2-268A0A0C4DH90 116 aa2.5□□□□□ -2.01
RTN1-207ENST00000490111 NUPR1O60356 82 aa2.5□□□□□ -2.01
RTN1-207ENST00000490111 APOC3P02656 99 aa2.5□□□□□ -2.01
RTN1-207ENST00000490111 COX6A2Q02221 97 aa2.5□□□□□ -2.01
RTN1-207ENST00000490111 C9orf116Q5BN46 136 aaPredicted RBP2.5□□□□□ -2.01
RTN1-207ENST00000490111 SPACA4Q8TDM5 124 aa2.5□□□□□ -2.01
RTN1-207ENST00000490111 PSORS1C2Q9UIG4 136 aa2.5□□□□□ -2.01
RTN1-207ENST00000490111 TRBV7-3A0A075B6L6 115 aa2.49□□□□□ -2.01
RTN1-207ENST00000490111 ATOX1O00244 68 aa2.49□□□□□ -2.01
RTN1-207ENST00000490111 RPL7L1Q6DKI1 246 aaKnown RBP2.49□□□□□ -2.01
RTN1-207ENST00000490111 SPINK6Q6UWN8 80 aa2.49□□□□□ -2.01
RTN1-207ENST00000490111 Q9BRP9 147 aa2.49□□□□□ -2.01
RTN1-207ENST00000490111 SMCO4Q9NRQ5 59 aa2.49□□□□□ -2.01
RTN1-207ENST00000490111 PRO2289Q9P1D8 64 aa2.49□□□□□ -2.01
RTN1-207ENST00000490111 A0A096LNI7 61 aa2.48□□□□□ -2.01
RTN1-207ENST00000490111 MGPP08493 103 aa2.48□□□□□ -2.01
RTN1-207ENST00000490111 ELOBQ15370 118 aa2.48□□□□□ -2.01
RTN1-207ENST00000490111 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.48□□□□□ -2.01
RTN1-207ENST00000490111 CYTL1Q9NRR1 136 aa2.48□□□□□ -2.01
RTN1-207ENST00000490111 PRR34Q9NV39 138 aa2.48□□□□□ -2.01
RTN1-207ENST00000490111 SYNE2Q8WXH0 6885 aaKnown RBP2.48□□□□□ -2.01
RTN1-207ENST00000490111 TRBV10-1A0A0K0K1A3 114 aa2.47□□□□□ -2.01
RTN1-207ENST00000490111 TRBV6-1A0A0K0K1D8 114 aa2.47□□□□□ -2.01
RTN1-207ENST00000490111 A0A1W2PNM2 257 aa2.47□□□□□ -2.01
RTN1-207ENST00000490111 KRTDAPP60985 99 aa2.47□□□□□ -2.01
RTN1-207ENST00000490111 CNBPP62633 177 aaKnown RBP2.47□□□□□ -2.01
RTN1-207ENST00000490111 SEC11AP67812 179 aa2.47□□□□□ -2.01
RTN1-207ENST00000490111 LINC00299Q6ZSB3 139 aa2.47□□□□□ -2.01
RTN1-207ENST00000490111 FAM213BQ8TBF2 198 aa2.47□□□□□ -2.01
RTN1-207ENST00000490111 PPDPFLQ8WWR9 84 aa2.47□□□□□ -2.01
RTN1-207ENST00000490111 TMEM167BQ9NRX6 74 aa2.47□□□□□ -2.01
RTN1-207ENST00000490111 PLAC8Q9NZF1 115 aa2.47□□□□□ -2.01
RTN1-207ENST00000490111 TRBV25-1A0A075B6N4 114 aa2.46□□□□□ -2.02
RTN1-207ENST00000490111 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.46□□□□□ -2.02
RTN1-207ENST00000490111 FXYD6-FXYD2A0A087WZ82 144 aa2.46□□□□□ -2.02
RTN1-207ENST00000490111 IGKV2-29A2NJV5 120 aaPredicted RBP2.46□□□□□ -2.02
RTN1-207ENST00000490111 H3BRM9 83 aa2.46□□□□□ -2.02
RTN1-207ENST00000490111 HRES1P13985 223 aa2.46□□□□□ -2.02
RTN1-207ENST00000490111 DSCR10P59022 87 aa2.46□□□□□ -2.02
RTN1-207ENST00000490111 C2orf82Q6UX34 121 aa2.46□□□□□ -2.02
RTN1-207ENST00000490111 KRTAP11-1Q8IUC1 163 aa2.46□□□□□ -2.02
RTN1-207ENST00000490111 SERP2Q8N6R1 65 aa2.46□□□□□ -2.02
RTN1-207ENST00000490111 ST20Q9HBF5 79 aa2.46□□□□□ -2.02
RTN1-207ENST00000490111 RPS10P5Q9NQ39 176 aa2.46□□□□□ -2.02
RTN1-207ENST00000490111 SSPOA2VEC9 5147 aa2.46□□□□□ -2.02
RTN1-207ENST00000490111 TRBV10-3A0A0K0K1G6 114 aa2.45□□□□□ -2.02
RTN1-207ENST00000490111 CTXND1A0A1B0GTU2 59 aa2.45□□□□□ -2.02
RTN1-207ENST00000490111 HCG22E2RYF7 251 aa2.45□□□□□ -2.02
RTN1-207ENST00000490111 M0QY20 66 aa2.45□□□□□ -2.02
RTN1-207ENST00000490111 HINT1P49773 126 aaPredicted RBP2.45□□□□□ -2.02
RTN1-207ENST00000490111 LCE4AQ5TA78 99 aa2.45□□□□□ -2.02
RTN1-207ENST00000490111 SPTSSBQ8NFR3 76 aa2.45□□□□□ -2.02
RTN1-207ENST00000490111 RPL39LQ96EH5 51 aaKnown RBP2.45□□□□□ -2.02
RTN1-207ENST00000490111 CYP4F30PQ9H0H9 118 aa2.45□□□□□ -2.02
RTN1-207ENST00000490111 CYSTM1Q9H1C7 97 aa2.45□□□□□ -2.02
RTN1-207ENST00000490111 TRAV13-2A0A0B4J235 113 aa2.44□□□□□ -2.02
RTN1-207ENST00000490111 A0A1W2PNN7 141 aa2.44□□□□□ -2.02
RTN1-207ENST00000490111 IGLC3P0DOY3 106 aa2.44□□□□□ -2.02
RTN1-207ENST00000490111 SERF2P84101 59 aa2.44□□□□□ -2.02
RTN1-207ENST00000490111 ADIRFQ15847 76 aa2.44□□□□□ -2.02
RTN1-207ENST00000490111 XP32Q5T750 250 aa2.44□□□□□ -2.02
RTN1-207ENST00000490111 BAGE2Q86Y30 109 aa2.44□□□□□ -2.02
RTN1-207ENST00000490111 CDC42SE1Q9NRR8 79 aa2.44□□□□□ -2.02
RTN1-207ENST00000490111 SPCS1Q9Y6A9 102 aa2.44□□□□□ -2.02
RTN1-207ENST00000490111 S100ZQ8WXG8 99 aa2.43□□□□□ -2.02
RTN1-207ENST00000490111 LINC00167Q96N53 147 aa2.43□□□□□ -2.02
RTN1-207ENST00000490111 C22orf24Q9Y442 160 aa2.43□□□□□ -2.02
RTN1-207ENST00000490111 GVQW2A0A096LPI5 108 aaPredicted RBP2.42□□□□□ -2.02
RTN1-207ENST00000490111 A0A1W2PPM0 123 aa2.42□□□□□ -2.02
RTN1-207ENST00000490111 SYS1-DBNDD2H3BUS1 97 aa2.42□□□□□ -2.02
RTN1-207ENST00000490111 NDUFC1O43677 76 aa2.42□□□□□ -2.02
RTN1-207ENST00000490111 MOBPQ13875 183 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms