RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 LOC400499M0QZD8 3231 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 TRAV10A0A0B4J240 114 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 TRGV4A0A0C4DH28 118 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 A0A1B0GU69 56 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 H0Y9P7 68 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 IGHV1-46P01743 117 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 IGHV3-11P01762 117 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 IGHV3-53P01767 116 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 HRES1P13985 223 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 TSPEAR-AS2P59090 65 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 DEFB133Q30KQ1 61 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 DEFB109BQ30KR1 87 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 Q8IZM0 81 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 LEAP2Q969E1 77 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 TTTY12Q9BZ98 90 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 CDC42SE2Q9NRR3 84 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 ZNF706Q9Y5V0 76 aaPredicted RBP1.18□□□□□ -2.22
HMGN1-218ENST00000490032 LINC01558Q9Y6Z2 57 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 DSCAML1Q8TD84 2053 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 RP1L1Q8IWN7 2480 aaPredicted RBP1.18□□□□□ -2.22
HMGN1-218ENST00000490032 FLNCQ14315 2725 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 ITPR2Q14571 2701 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 CSPG4Q6UVK1 2322 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 HIVEP1P15822 2718 aa1.17□□□□□ -2.22
HMGN1-218ENST00000490032 IGLV3-9A0A075B6K5 115 aa1.17□□□□□ -2.22
HMGN1-218ENST00000490032 E7EUB6 86 aa1.17□□□□□ -2.22
HMGN1-218ENST00000490032 H3BUX3 64 aa1.17□□□□□ -2.22
HMGN1-218ENST00000490032 RNASE3P12724 160 aaKnown RBP1.17□□□□□ -2.22
HMGN1-218ENST00000490032 HTN1P15515 57 aa1.17□□□□□ -2.22
HMGN1-218ENST00000490032 KLK9Q2XQG4 91 aa1.17□□□□□ -2.22
HMGN1-218ENST00000490032 ZFAND2AQ8N6M9 145 aa1.17□□□□□ -2.22
HMGN1-218ENST00000490032 C11orf72Q8NBR9 251 aa1.17□□□□□ -2.22
HMGN1-218ENST00000490032 Q8TAT8 98 aa1.17□□□□□ -2.22
HMGN1-218ENST00000490032 DMAC1Q96GE9 116 aa1.17□□□□□ -2.22
HMGN1-218ENST00000490032 CHCHD7Q9BUK0 85 aa1.17□□□□□ -2.22
HMGN1-218ENST00000490032 RHPN1-AS1Q9BWJ2 59 aa1.17□□□□□ -2.22
HMGN1-218ENST00000490032 TNCP24821 2201 aa1.17□□□□□ -2.22
HMGN1-218ENST00000490032 MED13LQ71F56 2210 aa1.17□□□□□ -2.22
HMGN1-218ENST00000490032 NF1P21359 2839 aa1.17□□□□□ -2.22
HMGN1-218ENST00000490032 DOCK10Q96BY6 2186 aa1.17□□□□□ -2.22
HMGN1-218ENST00000490032 CELSR3Q9NYQ7 3312 aa1.17□□□□□ -2.22
HMGN1-218ENST00000490032 STAB1Q9NY15 2570 aa1.16□□□□□ -2.22
HMGN1-218ENST00000490032 IGLV10-54A0A075B6I4 117 aa1.16□□□□□ -2.22
HMGN1-218ENST00000490032 DEFB131BA0A096LNP1 70 aa1.16□□□□□ -2.22
HMGN1-218ENST00000490032 APELAP0DMC3 54 aa1.16□□□□□ -2.22
HMGN1-218ENST00000490032 CCL18P55774 89 aa1.16□□□□□ -2.22
HMGN1-218ENST00000490032 LINC00313P59037 77 aa1.16□□□□□ -2.22
HMGN1-218ENST00000490032 DEFB131AP59861 70 aa1.16□□□□□ -2.22
HMGN1-218ENST00000490032 CNBPP62633 177 aaKnown RBP1.16□□□□□ -2.22
HMGN1-218ENST00000490032 MIR22HGQ0VDD5 57 aa1.16□□□□□ -2.22
HMGN1-218ENST00000490032 PATE1Q8WXA2 126 aa1.16□□□□□ -2.22
HMGN1-218ENST00000490032 KCNQ1DNQ9H478 68 aa1.16□□□□□ -2.22
HMGN1-218ENST00000490032 PROK2Q9HC23 129 aa1.16□□□□□ -2.22
HMGN1-218ENST00000490032 OTOGQ6ZRI0 2925 aa1.16□□□□□ -2.22
HMGN1-218ENST00000490032 MGAQ8IWI9 3026 aa1.16□□□□□ -2.22
HMGN1-218ENST00000490032 UNC13CQ8NB66 2214 aa1.15□□□□□ -2.23
HMGN1-218ENST00000490032 JMJD1CQ15652 2540 aa1.15□□□□□ -2.23
HMGN1-218ENST00000490032 LCE6AA0A183 80 aa1.15□□□□□ -2.23
HMGN1-218ENST00000490032 IGKV2-29A2NJV5 120 aaPredicted RBP1.15□□□□□ -2.23
HMGN1-218ENST00000490032 A6NN06 94 aa1.15□□□□□ -2.23
HMGN1-218ENST00000490032 OXTP01178 125 aa1.15□□□□□ -2.23
HMGN1-218ENST00000490032 Q5VV11 94 aa1.15□□□□□ -2.23
HMGN1-218ENST00000490032 Q6ZQY7 126 aa1.15□□□□□ -2.23
HMGN1-218ENST00000490032 Q6ZTI0 123 aa1.15□□□□□ -2.23
HMGN1-218ENST00000490032 RP1P56715 2156 aa1.15□□□□□ -2.23
HMGN1-218ENST00000490032 NBEAL1Q6ZS30 2694 aa1.15□□□□□ -2.23
HMGN1-218ENST00000490032 LAMA5O15230 3695 aa1.15□□□□□ -2.23
HMGN1-218ENST00000490032 COL12A1Q99715 3063 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 ATRQ13535 2644 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 IGKV3-7A0A075B6H7 116 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.14□□□□□ -2.23
HMGN1-218ENST00000490032 A0A087WSZ3 146 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 TRGV1A0A0A0MS02 117 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 LINC00959A0A1B0GUT2 108 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 CLPSL1A2RUU4 121 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 A8MWP4 228 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 PRB4P10163 310 aaPredicted RBP1.14□□□□□ -2.23
HMGN1-218ENST00000490032 RPL37AP61513 92 aaKnown RBP1.14□□□□□ -2.23
HMGN1-218ENST00000490032 DEFB113Q30KQ7 82 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 C1orf137Q5JT78 98 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 C10orf55Q5SWW7 151 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 C1orf134Q5TEV5 83 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 SPATA8Q6RVD6 105 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 COA5Q86WW8 74 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 LINC00337Q8N6G1 96 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 Q8NAQ8 132 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 DEFB105AQ8NG35 78 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 SMR3AQ99954 134 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 CR1P17927 2039 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 ABCA4P78363 2273 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 CENPEQ02224 2701 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 COL6A5A8TX70 2615 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 ACANP16112 2415 aa1.14□□□□□ -2.23
HMGN1-218ENST00000490032 USF3Q68DE3 2245 aa1.13□□□□□ -2.23
HMGN1-218ENST00000490032 PDZD2O15018 2839 aa1.13□□□□□ -2.23
HMGN1-218ENST00000490032 APCP25054 2843 aa1.13□□□□□ -2.23
HMGN1-218ENST00000490032 PKDREJQ9NTG1 2253 aa1.13□□□□□ -2.23
HMGN1-218ENST00000490032 ATMQ13315 3056 aa1.13□□□□□ -2.23
HMGN1-218ENST00000490032 MALRD1Q5VYJ5 2156 aa1.13□□□□□ -2.23
HMGN1-218ENST00000490032 LRBAP50851 2863 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms