RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 LINC01558Q9Y6Z2 57 aa13.52□□□□□ -0.25
NSMCE4A-211ENST00000489266 IGLV1-50A0A075B6I6 118 aa13.51□□□□□ -0.25
NSMCE4A-211ENST00000489266 C8orf87E5RJ46 101 aa13.51□□□□□ -0.25
NSMCE4A-211ENST00000489266 CASC2Q6XLA1 102 aa13.51□□□□□ -0.25
NSMCE4A-211ENST00000489266 IGLV7-46A0A075B6I9 117 aa13.51□□□□□ -0.25
NSMCE4A-211ENST00000489266 RPL37AP61513 92 aaKnown RBP13.51□□□□□ -0.25
NSMCE4A-211ENST00000489266 IGFL1Q6UW32 110 aa13.5□□□□□ -0.25
NSMCE4A-211ENST00000489266 UNC79Q9P2D8 2635 aa13.47□□□□□ -0.25
NSMCE4A-211ENST00000489266 A0A087WSZ3 146 aa13.46□□□□□ -0.25
NSMCE4A-211ENST00000489266 IGLV5-37A0A075B6J1 123 aa13.46□□□□□ -0.25
NSMCE4A-211ENST00000489266 TLX1NBP0CAT3 122 aa13.45□□□□□ -0.26
NSMCE4A-211ENST00000489266 CNBPP62633 177 aaKnown RBP13.45□□□□□ -0.26
NSMCE4A-211ENST00000489266 KMT2BQ9UMN6 2715 aaPredicted RBP13.44□□□□□ -0.26
NSMCE4A-211ENST00000489266 SPAG11AQ6PDA7 123 aa13.43□□□□□ -0.26
NSMCE4A-211ENST00000489266 FAM168BA1KXE4 195 aa13.42□□□□□ -0.26
NSMCE4A-211ENST00000489266 SPINK7P58062 85 aa13.41□□□□□ -0.26
NSMCE4A-211ENST00000489266 FASNP49327 2511 aaKnown RBP13.4□□□□□ -0.26
NSMCE4A-211ENST00000489266 HIVEP2P31629 2446 aa13.39□□□□□ -0.27
NSMCE4A-211ENST00000489266 SMR3AQ99954 134 aa13.38□□□□□ -0.27
NSMCE4A-211ENST00000489266 H3BNG1 76 aa13.38□□□□□ -0.27
NSMCE4A-211ENST00000489266 KRTAP10-3P60369 221 aa13.38□□□□□ -0.27
NSMCE4A-211ENST00000489266 IGLV8-61A0A075B6I0 122 aa13.36□□□□□ -0.27
NSMCE4A-211ENST00000489266 KRTAP7-1Q8IUC3 87 aa13.36□□□□□ -0.27
NSMCE4A-211ENST00000489266 A8MWP4 228 aa13.35□□□□□ -0.27
NSMCE4A-211ENST00000489266 LINC00313P59037 77 aa13.32□□□□□ -0.28
NSMCE4A-211ENST00000489266 PCOTHQ58A44 107 aa13.31□□□□□ -0.28
NSMCE4A-211ENST00000489266 LINC01556Q5JQF7 62 aa13.3□□□□□ -0.28
NSMCE4A-211ENST00000489266 REG3GQ6UW15 175 aa13.28□□□□□ -0.28
NSMCE4A-211ENST00000489266 NOTCH2Q04721 2471 aa13.28□□□□□ -0.28
NSMCE4A-211ENST00000489266 HECTD1Q9ULT8 2610 aa13.28□□□□□ -0.28
NSMCE4A-211ENST00000489266 LINC00472Q9H8W2 130 aa13.27□□□□□ -0.29
NSMCE4A-211ENST00000489266 PRAC1Q96KF2 57 aa13.25□□□□□ -0.29
NSMCE4A-211ENST00000489266 MMP24-AS1A0A0U1RRL7 71 aa13.25□□□□□ -0.29
NSMCE4A-211ENST00000489266 OTOGQ6ZRI0 2925 aa13.24□□□□□ -0.29
NSMCE4A-211ENST00000489266 HRES1P13985 223 aa13.23□□□□□ -0.29
NSMCE4A-211ENST00000489266 H3BS24 57 aa13.17□□□□□ -0.3
NSMCE4A-211ENST00000489266 H0Y9J4 135 aa13.17□□□□□ -0.3
NSMCE4A-211ENST00000489266 LINC01554Q52M75 96 aa13.17□□□□□ -0.3
NSMCE4A-211ENST00000489266 VWFP04275 2813 aa13.17□□□□□ -0.3
NSMCE4A-211ENST00000489266 F8P00451 2351 aa13.16□□□□□ -0.3
NSMCE4A-211ENST00000489266 INAFM1C9JVW0 142 aa13.16□□□□□ -0.3
NSMCE4A-211ENST00000489266 PLA2G1BP04054 148 aaKnown RBP13.16□□□□□ -0.3
NSMCE4A-211ENST00000489266 TP53AIP1Q9HCN2 124 aa13.16□□□□□ -0.3
NSMCE4A-211ENST00000489266 PRLHP81277 87 aa13.15□□□□□ -0.3
NSMCE4A-211ENST00000489266 Q6ZR54 194 aa13.15□□□□□ -0.3
NSMCE4A-211ENST00000489266 ADM2Q7Z4H4 148 aa13.15□□□□□ -0.3
NSMCE4A-211ENST00000489266 NSD1Q96L73 2696 aaPredicted RBP13.14□□□□□ -0.31
NSMCE4A-211ENST00000489266 IGKV2-24A0A0C4DH68 120 aa13.13□□□□□ -0.31
NSMCE4A-211ENST00000489266 DNAH10OSP0CZ25 163 aa13.13□□□□□ -0.31
NSMCE4A-211ENST00000489266 ASB16-AS1Q495Z4 193 aa13.12□□□□□ -0.31
NSMCE4A-211ENST00000489266 HIVEP1P15822 2718 aa13.1□□□□□ -0.31
NSMCE4A-211ENST00000489266 TENM1Q9UKZ4 2725 aa13.08□□□□□ -0.32
NSMCE4A-211ENST00000489266 CASC10Q5T4H9 136 aa13.08□□□□□ -0.32
NSMCE4A-211ENST00000489266 DEFB131BA0A096LNP1 70 aa13.06□□□□□ -0.32
NSMCE4A-211ENST00000489266 SPRR1BP22528 89 aa13.04□□□□□ -0.32
NSMCE4A-211ENST00000489266 PRR26Q8N8Z3 221 aa13.02□□□□□ -0.32
NSMCE4A-211ENST00000489266 ATRQ13535 2644 aa13.02□□□□□ -0.32
NSMCE4A-211ENST00000489266 TENM2Q9NT68 2774 aa13.01□□□□□ -0.33
NSMCE4A-211ENST00000489266 TRRAPQ9Y4A5 3859 aa12.99□□□□□ -0.33
NSMCE4A-211ENST00000489266 RTL8CO15255 209 aa12.99□□□□□ -0.33
NSMCE4A-211ENST00000489266 TEP1Q99973 2627 aaKnown RBP12.99□□□□□ -0.33
NSMCE4A-211ENST00000489266 MDFIQ99750 246 aa12.98□□□□□ -0.33
NSMCE4A-211ENST00000489266 A0A087X002 238 aa12.98□□□□□ -0.33
NSMCE4A-211ENST00000489266 C8orf17Q9NRJ1 99 aa12.97□□□□□ -0.33
NSMCE4A-211ENST00000489266 Q96NJ1 140 aa12.95□□□□□ -0.34
NSMCE4A-211ENST00000489266 PKD1L1Q8TDX9 2849 aa12.94□□□□□ -0.34
NSMCE4A-211ENST00000489266 A0A096LNI7 61 aa12.91□□□□□ -0.34
NSMCE4A-211ENST00000489266 DNAH1Q9P2D7 4330 aa12.9□□□□□ -0.35
NSMCE4A-211ENST00000489266 SPATA8Q6RVD6 105 aa12.88□□□□□ -0.35
NSMCE4A-211ENST00000489266 MRPL34Q9BQ48 92 aaKnown RBP12.85□□□□□ -0.35
NSMCE4A-211ENST00000489266 ACYP2P14621 99 aa12.83□□□□□ -0.36
NSMCE4A-211ENST00000489266 KRTAP11-1Q8IUC1 163 aa12.83□□□□□ -0.36
NSMCE4A-211ENST00000489266 ALMS1Q8TCU4 4167 aa12.83□□□□□ -0.36
NSMCE4A-211ENST00000489266 SRRM2Q9UQ35 2752 aaKnown RBP12.83□□□□□ -0.36
NSMCE4A-211ENST00000489266 A0A1B0GVX0 72 aa12.83□□□□□ -0.36
NSMCE4A-211ENST00000489266 BAHCC1Q9P281 2608 aa12.82□□□□□ -0.36
NSMCE4A-211ENST00000489266 IGHV6-1A0A0B4J1U7 121 aa12.82□□□□□ -0.36
NSMCE4A-211ENST00000489266 A0A1B0GU69 56 aa12.79□□□□□ -0.36
NSMCE4A-211ENST00000489266 K7EIL1 84 aa12.77□□□□□ -0.36
NSMCE4A-211ENST00000489266 OXLD1Q5BKU9 147 aa12.76□□□□□ -0.37
NSMCE4A-211ENST00000489266 CSAG1Q6PB30 78 aa12.76□□□□□ -0.37
NSMCE4A-211ENST00000489266 RETNLBQ9BQ08 111 aa12.74□□□□□ -0.37
NSMCE4A-211ENST00000489266 MIR22HGQ0VDD5 57 aa12.73□□□□□ -0.37
NSMCE4A-211ENST00000489266 KRTAP10-11P60412 298 aa12.71□□□□□ -0.37
NSMCE4A-211ENST00000489266 KRTAP13-3Q3SY46 172 aa12.71□□□□□ -0.37
NSMCE4A-211ENST00000489266 NOTCH2NLQ7Z3S9 236 aa12.71□□□□□ -0.37
NSMCE4A-211ENST00000489266 Q5W150 140 aa12.71□□□□□ -0.38
NSMCE4A-211ENST00000489266 CDK2AP2O75956 126 aa12.7□□□□□ -0.38
NSMCE4A-211ENST00000489266 DMAC1Q96GE9 116 aa12.7□□□□□ -0.38
NSMCE4A-211ENST00000489266 UQCR11O14957 56 aa12.69□□□□□ -0.38
NSMCE4A-211ENST00000489266 TENM3Q9P273 2699 aa12.68□□□□□ -0.38
NSMCE4A-211ENST00000489266 FLNBO75369 2602 aaKnown RBP12.68□□□□□ -0.38
NSMCE4A-211ENST00000489266 ANK2Q01484 3957 aa12.67□□□□□ -0.38
NSMCE4A-211ENST00000489266 IGLV9-49A0A0B4J1Y8 123 aa12.66□□□□□ -0.38
NSMCE4A-211ENST00000489266 KRTAP24-1Q3LI83 254 aa12.65□□□□□ -0.38
NSMCE4A-211ENST00000489266 CHTF8P0CG12 524 aa12.64□□□□□ -0.39
NSMCE4A-211ENST00000489266 KRTAP13-1Q8IUC0 172 aa12.64□□□□□ -0.39
NSMCE4A-211ENST00000489266 CMYA5Q8N3K9 4069 aa12.64□□□□□ -0.39
NSMCE4A-211ENST00000489266 STAB1Q9NY15 2570 aa12.64□□□□□ -0.39
NSMCE4A-211ENST00000489266 CSMD3Q7Z407 3707 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms