RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 NF1P21359 2839 aa-0.24□□□□□ -2.45
RFC4-213ENST00000489028 STARD9Q9P2P6 4700 aa-0.25□□□□□ -2.45
RFC4-213ENST00000489028 PCLOQ9Y6V0 5065 aa-0.25□□□□□ -2.45
RFC4-213ENST00000489028 AKAP13Q12802 2813 aa-0.25□□□□□ -2.45
RFC4-213ENST00000489028 NBPF19A0A087WUL8 3843 aa-0.25□□□□□ -2.45
RFC4-213ENST00000489028 KRTAP6-2Q3LI66 62 aa-0.25□□□□□ -2.45
RFC4-213ENST00000489028 C18orf32Q8TCD1 76 aa-0.25□□□□□ -2.45
RFC4-213ENST00000489028 CFAP74Q9C0B2 1584 aa-0.25□□□□□ -2.45
RFC4-213ENST00000489028 WIZO95785 1651 aa-0.25□□□□□ -2.45
RFC4-213ENST00000489028 SETD2Q9BYW2 2564 aaPredicted RBP-0.25□□□□□ -2.45
RFC4-213ENST00000489028 DNAH6Q9C0G6 4158 aa-0.25□□□□□ -2.45
RFC4-213ENST00000489028 DEPDC5O75140 1603 aa-0.26□□□□□ -2.45
RFC4-213ENST00000489028 ANKARQ7Z5J8 1434 aa-0.26□□□□□ -2.45
RFC4-213ENST00000489028 ANKRD50Q9ULJ7 1429 aa-0.26□□□□□ -2.45
RFC4-213ENST00000489028 MRPL33O75394 65 aaKnown RBP-0.26□□□□□ -2.45
RFC4-213ENST00000489028 LYSTQ99698 3801 aa-0.27□□□□□ -2.45
RFC4-213ENST00000489028 VPS13DQ5THJ4 4388 aa-0.27□□□□□ -2.45
RFC4-213ENST00000489028 USH2AO75445 5202 aa-0.27□□□□□ -2.45
RFC4-213ENST00000489028 DEFB131BA0A096LNP1 70 aa-0.27□□□□□ -2.45
RFC4-213ENST00000489028 LYNX1G3V0Z9 82 aa-0.27□□□□□ -2.45
RFC4-213ENST00000489028 DEFA5Q01523 94 aa-0.27□□□□□ -2.45
RFC4-213ENST00000489028 KRTAP19-8Q3LI54 63 aa-0.27□□□□□ -2.45
RFC4-213ENST00000489028 DNAH9Q9NYC9 4486 aa-0.27□□□□□ -2.45
RFC4-213ENST00000489028 MXRA5Q9NR99 2828 aa-0.27□□□□□ -2.45
RFC4-213ENST00000489028 UBR4Q5T4S7 5183 aa-0.27□□□□□ -2.45
RFC4-213ENST00000489028 SPTBN4Q9H254 2564 aa-0.27□□□□□ -2.45
RFC4-213ENST00000489028 FAT3Q8TDW7 4589 aa-0.27□□□□□ -2.45
RFC4-213ENST00000489028 RRBP1Q9P2E9 1410 aaKnown RBP-0.28□□□□□ -2.45
RFC4-213ENST00000489028 H0YAA0 97 aa-0.28□□□□□ -2.45
RFC4-213ENST00000489028 EPG5Q9HCE0 2579 aa-0.28□□□□□ -2.45
RFC4-213ENST00000489028 HERC2O95714 4834 aa-0.28□□□□□ -2.45
RFC4-213ENST00000489028 SPG11Q96JI7 2443 aa-0.28□□□□□ -2.45
RFC4-213ENST00000489028 AKAP9Q99996 3911 aa-0.29□□□□□ -2.46
RFC4-213ENST00000489028 HFM1A2PYH4 1435 aa-0.29□□□□□ -2.46
RFC4-213ENST00000489028 TNRC18O15417 2968 aaPredicted RBP-0.29□□□□□ -2.46
RFC4-213ENST00000489028 DNAH3Q8TD57 4116 aa-0.29□□□□□ -2.46
RFC4-213ENST00000489028 CFAP43Q8NDM7 1665 aa-0.29□□□□□ -2.46
RFC4-213ENST00000489028 SPRR2EP22531 72 aa-0.29□□□□□ -2.46
RFC4-213ENST00000489028 KRTAP20-2Q3LI61 65 aa-0.29□□□□□ -2.46
RFC4-213ENST00000489028 UBL5Q9BZL1 73 aa-0.29□□□□□ -2.46
RFC4-213ENST00000489028 PRRC2CQ9Y520 2896 aaKnown RBP-0.29□□□□□ -2.46
RFC4-213ENST00000489028 SONP18583 2426 aaKnown RBP-0.29□□□□□ -2.46
RFC4-213ENST00000489028 CUBNO60494 3623 aa-0.3□□□□□ -2.46
RFC4-213ENST00000489028 DDX60LQ5H9U9 1706 aaKnown RBP-0.3□□□□□ -2.46
RFC4-213ENST00000489028 ZZEF1O43149 2961 aa-0.3□□□□□ -2.46
RFC4-213ENST00000489028 MUC17Q685J3 4493 aa-0.3□□□□□ -2.46
RFC4-213ENST00000489028 PKHD1L1Q86WI1 4243 aa-0.3□□□□□ -2.46
RFC4-213ENST00000489028 THOC2Q8NI27 1593 aaKnown RBP-0.3□□□□□ -2.46
RFC4-213ENST00000489028 C9orf92A6NGG3 77 aa-0.3□□□□□ -2.46
RFC4-213ENST00000489028 RALGAPBQ86X10 1494 aa-0.3□□□□□ -2.46
RFC4-213ENST00000489028 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.3□□□□□ -2.46
RFC4-213ENST00000489028 HTTP42858 3142 aa-0.31□□□□□ -2.46
RFC4-213ENST00000489028 APOBP04114 4563 aaKnown RBP-0.31□□□□□ -2.46
RFC4-213ENST00000489028 MAP3K1Q13233 1512 aa-0.31□□□□□ -2.46
RFC4-213ENST00000489028 TACC2O95359 2948 aa-0.31□□□□□ -2.46
RFC4-213ENST00000489028 IAPPP10997 89 aa-0.31□□□□□ -2.46
RFC4-213ENST00000489028 KCNQ1DNQ9H478 68 aa-0.31□□□□□ -2.46
RFC4-213ENST00000489028 CD163L1Q9NR16 1453 aa-0.31□□□□□ -2.46
RFC4-213ENST00000489028 PLCH1Q4KWH8 1693 aa-0.31□□□□□ -2.46
RFC4-213ENST00000489028 DNAH11Q96DT5 4516 aa-0.32□□□□□ -2.46
RFC4-213ENST00000489028 SCN11AQ9UI33 1791 aa-0.32□□□□□ -2.46
RFC4-213ENST00000489028 USP9YO00507 2555 aaPredicted RBP-0.32□□□□□ -2.46
RFC4-213ENST00000489028 RICTORQ6R327 1708 aa-0.32□□□□□ -2.46
RFC4-213ENST00000489028 FASNP49327 2511 aaKnown RBP-0.32□□□□□ -2.46
RFC4-213ENST00000489028 H3BNG1 76 aa-0.32□□□□□ -2.46
RFC4-213ENST00000489028 DEFB130BP0DP73 79 aa-0.32□□□□□ -2.46
RFC4-213ENST00000489028 DEFB130AP0DP74 79 aa-0.32□□□□□ -2.46
RFC4-213ENST00000489028 ANK3Q12955 4377 aaKnown RBP-0.32□□□□□ -2.46
RFC4-213ENST00000489028 VPS13BQ7Z7G8 4022 aa-0.32□□□□□ -2.46
RFC4-213ENST00000489028 DMXL1Q9Y485 3027 aa-0.32□□□□□ -2.46
RFC4-213ENST00000489028 ITPR3Q14573 2671 aa-0.33□□□□□ -2.46
RFC4-213ENST00000489028 H3BVH4 76 aa-0.33□□□□□ -2.46
RFC4-213ENST00000489028 MT4P47944 62 aa-0.33□□□□□ -2.46
RFC4-213ENST00000489028 PRLHP81277 87 aa-0.33□□□□□ -2.46
RFC4-213ENST00000489028 TEP1Q99973 2627 aaKnown RBP-0.33□□□□□ -2.46
RFC4-213ENST00000489028 EPPK1P58107 5090 aaKnown RBP-0.33□□□□□ -2.46
RFC4-213ENST00000489028 HIVEP1P15822 2718 aa-0.33□□□□□ -2.46
RFC4-213ENST00000489028 MYO18BQ8IUG5 2567 aa-0.34□□□□□ -2.46
RFC4-213ENST00000489028 DSPP15924 2871 aaKnown RBP-0.34□□□□□ -2.46
RFC4-213ENST00000489028 SCRIBQ14160 1630 aa-0.34□□□□□ -2.46
RFC4-213ENST00000489028 KALRNO60229 2985 aa-0.34□□□□□ -2.46
RFC4-213ENST00000489028 LMTK2Q8IWU2 1503 aa-0.34□□□□□ -2.46
RFC4-213ENST00000489028 ABCA8O94911 1581 aa-0.35□□□□□ -2.47
RFC4-213ENST00000489028 LAMA1P25391 3075 aa-0.35□□□□□ -2.47
RFC4-213ENST00000489028 DNAH2Q9P225 4427 aa-0.35□□□□□ -2.47
RFC4-213ENST00000489028 ENHOQ6UWT2 76 aa-0.35□□□□□ -2.47
RFC4-213ENST00000489028 SPRR2FQ96RM1 72 aa-0.35□□□□□ -2.47
RFC4-213ENST00000489028 ACACAQ13085 2346 aa-0.35□□□□□ -2.47
RFC4-213ENST00000489028 A0A0C4DFX4 3053 aa-0.36□□□□□ -2.47
RFC4-213ENST00000489028 GCN1Q92616 2671 aaKnown RBP-0.36□□□□□ -2.47
RFC4-213ENST00000489028 HYDINQ4G0P3 5121 aa-0.36□□□□□ -2.47
RFC4-213ENST00000489028 FAM186AA6NE01 2351 aa-0.36□□□□□ -2.47
RFC4-213ENST00000489028 CCDC168Q8NDH2 2452 aa-0.36□□□□□ -2.47
RFC4-213ENST00000489028 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.36□□□□□ -2.47
RFC4-213ENST00000489028 ITSN1Q15811 1721 aa-0.36□□□□□ -2.47
RFC4-213ENST00000489028 DNAH1Q9P2D7 4330 aa-0.36□□□□□ -2.47
RFC4-213ENST00000489028 LRRK2Q5S007 2527 aa-0.36□□□□□ -2.47
RFC4-213ENST00000489028 RYR1P21817 5038 aa-0.37□□□□□ -2.47
RFC4-213ENST00000489028 SACSQ9NZJ4 4579 aa-0.37□□□□□ -2.47
RFC4-213ENST00000489028 PKD1L2Q7Z442 2459 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 233.9 ms