RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 VPS13CQ709C8 3753 aa2.96□□□□□ -1.94
CDC42BPA-213ENST00000488131 TLN2Q9Y4G6 2542 aa2.96□□□□□ -1.94
CDC42BPA-213ENST00000488131 ZNF292O60281 2723 aa2.96□□□□□ -1.94
CDC42BPA-213ENST00000488131 IGLV1-50A0A075B6I6 118 aa2.96□□□□□ -1.94
CDC42BPA-213ENST00000488131 A8MWP4 228 aa2.96□□□□□ -1.94
CDC42BPA-213ENST00000488131 RTL8CO15255 209 aa2.96□□□□□ -1.94
CDC42BPA-213ENST00000488131 TLX1NBP0CAT3 122 aa2.96□□□□□ -1.94
CDC42BPA-213ENST00000488131 SPAG11AQ6PDA7 123 aa2.96□□□□□ -1.94
CDC42BPA-213ENST00000488131 IGFL1Q6UW32 110 aa2.96□□□□□ -1.94
CDC42BPA-213ENST00000488131 PRAC1Q96KF2 57 aa2.96□□□□□ -1.94
CDC42BPA-213ENST00000488131 KRTAP2-2Q9BYT5 123 aa2.95□□□□□ -1.94
CDC42BPA-213ENST00000488131 JMJD1CQ15652 2540 aa2.95□□□□□ -1.94
CDC42BPA-213ENST00000488131 AKAP9Q99996 3911 aa2.95□□□□□ -1.94
CDC42BPA-213ENST00000488131 SPG11Q96JI7 2443 aa2.95□□□□□ -1.94
CDC42BPA-213ENST00000488131 DEFB131BA0A096LNP1 70 aa2.94□□□□□ -1.94
CDC42BPA-213ENST00000488131 DEFB116Q30KQ4 102 aa2.94□□□□□ -1.94
CDC42BPA-213ENST00000488131 Q6ZR54 194 aa2.94□□□□□ -1.94
CDC42BPA-213ENST00000488131 NCOR2Q9Y618 2525 aa2.94□□□□□ -1.94
CDC42BPA-213ENST00000488131 A0A087WSZ3 146 aa2.94□□□□□ -1.94
CDC42BPA-213ENST00000488131 MMP24-AS1A0A0U1RRL7 71 aa2.94□□□□□ -1.94
CDC42BPA-213ENST00000488131 RPL37AP8A6NKH3 93 aa2.94□□□□□ -1.94
CDC42BPA-213ENST00000488131 HRES1P13985 223 aa2.94□□□□□ -1.94
CDC42BPA-213ENST00000488131 LINC00472Q9H8W2 130 aa2.94□□□□□ -1.94
CDC42BPA-213ENST00000488131 TP53AIP1Q9HCN2 124 aa2.94□□□□□ -1.94
CDC42BPA-213ENST00000488131 MYO9AB2RTY4 2548 aa2.94□□□□□ -1.94
CDC42BPA-213ENST00000488131 CEP295Q9C0D2 2601 aa2.93□□□□□ -1.94
CDC42BPA-213ENST00000488131 CELSR2Q9HCU4 2923 aa2.93□□□□□ -1.94
CDC42BPA-213ENST00000488131 NBASA2RRP1 2371 aa2.93□□□□□ -1.94
CDC42BPA-213ENST00000488131 ADM2Q7Z4H4 148 aa2.92□□□□□ -1.94
CDC42BPA-213ENST00000488131 APCP25054 2843 aa2.92□□□□□ -1.94
CDC42BPA-213ENST00000488131 RPL37AP61513 92 aaKnown RBP2.92□□□□□ -1.94
CDC42BPA-213ENST00000488131 MXRA5Q9NR99 2828 aa2.92□□□□□ -1.94
CDC42BPA-213ENST00000488131 IGKV2-24A0A0C4DH68 120 aa2.91□□□□□ -1.94
CDC42BPA-213ENST00000488131 CDK2AP2O75956 126 aa2.91□□□□□ -1.94
CDC42BPA-213ENST00000488131 SPATA8Q6RVD6 105 aa2.91□□□□□ -1.94
CDC42BPA-213ENST00000488131 CSMD2Q7Z408 3487 aa2.91□□□□□ -1.94
CDC42BPA-213ENST00000488131 PCOTHQ58A44 107 aa2.9□□□□□ -1.94
CDC42BPA-213ENST00000488131 KRTAP7-1Q8IUC3 87 aa2.9□□□□□ -1.94
CDC42BPA-213ENST00000488131 DEFB123Q8N688 67 aa2.9□□□□□ -1.94
CDC42BPA-213ENST00000488131 UTP20O75691 2785 aaKnown RBP2.9□□□□□ -1.95
CDC42BPA-213ENST00000488131 H3BNG1 76 aa2.9□□□□□ -1.95
CDC42BPA-213ENST00000488131 SPRR1BP22528 89 aa2.9□□□□□ -1.95
CDC42BPA-213ENST00000488131 RIF1Q5UIP0 2472 aaKnown RBP2.89□□□□□ -1.95
CDC42BPA-213ENST00000488131 REG3GQ6UW15 175 aa2.89□□□□□ -1.95
CDC42BPA-213ENST00000488131 RETNLBQ9BQ08 111 aa2.89□□□□□ -1.95
CDC42BPA-213ENST00000488131 FN1P02751 2386 aaKnown RBP2.89□□□□□ -1.95
CDC42BPA-213ENST00000488131 PTPN13Q12923 2485 aa2.89□□□□□ -1.95
CDC42BPA-213ENST00000488131 A0A0G2JQZ4 141 aa2.88□□□□□ -1.95
CDC42BPA-213ENST00000488131 A0A1W2PNN7 141 aa2.88□□□□□ -1.95
CDC42BPA-213ENST00000488131 ALMS1Q8TCU4 4167 aa2.88□□□□□ -1.95
CDC42BPA-213ENST00000488131 FAM168BA1KXE4 195 aa2.88□□□□□ -1.95
CDC42BPA-213ENST00000488131 SPART-AS1P0CW21 52 aa2.88□□□□□ -1.95
CDC42BPA-213ENST00000488131 KRTAP24-1Q3LI83 254 aa2.88□□□□□ -1.95
CDC42BPA-213ENST00000488131 ZANQ9Y493 2812 aa2.88□□□□□ -1.95
CDC42BPA-213ENST00000488131 GCN1Q92616 2671 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-213ENST00000488131 ZFYVE26Q68DK2 2539 aa2.87□□□□□ -1.95
CDC42BPA-213ENST00000488131 H0Y9J4 135 aa2.87□□□□□ -1.95
CDC42BPA-213ENST00000488131 LINC01556Q5JQF7 62 aa2.87□□□□□ -1.95
CDC42BPA-213ENST00000488131 DEFB135Q30KP9 77 aa2.86□□□□□ -1.95
CDC42BPA-213ENST00000488131 MAPK1IP1LQ8NDC0 245 aa2.86□□□□□ -1.95
CDC42BPA-213ENST00000488131 USP9YO00507 2555 aaPredicted RBP2.86□□□□□ -1.95
CDC42BPA-213ENST00000488131 NIPBLQ6KC79 2804 aaeCLIP2.86□□□□□ -1.95
CDC42BPA-213ENST00000488131 DEFB4AO15263 64 aa2.86□□□□□ -1.95
CDC42BPA-213ENST00000488131 CSAG1Q6PB30 78 aa2.86□□□□□ -1.95
CDC42BPA-213ENST00000488131 NOTCH2NLQ7Z3S9 236 aa2.86□□□□□ -1.95
CDC42BPA-213ENST00000488131 Q96NJ1 140 aa2.86□□□□□ -1.95
CDC42BPA-213ENST00000488131 C8orf17Q9NRJ1 99 aa2.86□□□□□ -1.95
CDC42BPA-213ENST00000488131 DOPEY1Q5JWR5 2465 aa2.85□□□□□ -1.95
CDC42BPA-213ENST00000488131 ANK3Q12955 4377 aaKnown RBP2.85□□□□□ -1.95
CDC42BPA-213ENST00000488131 EPG5Q9HCE0 2579 aa2.85□□□□□ -1.95
CDC42BPA-213ENST00000488131 KRTAP13-3Q3SY46 172 aa2.85□□□□□ -1.95
CDC42BPA-213ENST00000488131 DMAC1Q96GE9 116 aa2.85□□□□□ -1.95
CDC42BPA-213ENST00000488131 NBEAL2Q6ZNJ1 2754 aa2.85□□□□□ -1.95
CDC42BPA-213ENST00000488131 USP9XQ93008 2570 aaPredicted RBP2.85□□□□□ -1.95
CDC42BPA-213ENST00000488131 ANKRD17O75179 2603 aaKnown RBP2.84□□□□□ -1.95
CDC42BPA-213ENST00000488131 OTOGQ6ZRI0 2925 aa2.84□□□□□ -1.95
CDC42BPA-213ENST00000488131 ACYP2P14621 99 aa2.84□□□□□ -1.95
CDC42BPA-213ENST00000488131 HTN3P15516 51 aa2.84□□□□□ -1.95
CDC42BPA-213ENST00000488131 MIR22HGQ0VDD5 57 aa2.84□□□□□ -1.95
CDC42BPA-213ENST00000488131 TEX15Q9BXT5 2789 aa2.84□□□□□ -1.95
CDC42BPA-213ENST00000488131 NF1P21359 2839 aa2.84□□□□□ -1.95
CDC42BPA-213ENST00000488131 CFAP46Q8IYW2 2715 aa2.84□□□□□ -1.96
CDC42BPA-213ENST00000488131 IGF2RP11717 2491 aa2.84□□□□□ -1.96
CDC42BPA-213ENST00000488131 TTC28Q96AY4 2481 aa2.84□□□□□ -1.96
CDC42BPA-213ENST00000488131 A0A1B0GU69 56 aa2.84□□□□□ -1.96
CDC42BPA-213ENST00000488131 UQCR11O14957 56 aa2.84□□□□□ -1.96
CDC42BPA-213ENST00000488131 FBN2P35556 2912 aa2.83□□□□□ -1.96
CDC42BPA-213ENST00000488131 LRRK2Q5S007 2527 aa2.83□□□□□ -1.96
CDC42BPA-213ENST00000488131 ZNF861PO60384 105 aa2.83□□□□□ -1.96
CDC42BPA-213ENST00000488131 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
CDC42BPA-213ENST00000488131 MRPL34Q9BQ48 92 aaKnown RBP2.83□□□□□ -1.96
CDC42BPA-213ENST00000488131 SPTBN4Q9H254 2564 aa2.82□□□□□ -1.96
CDC42BPA-213ENST00000488131 A0A1B0GVX0 72 aa2.82□□□□□ -1.96
CDC42BPA-213ENST00000488131 DNAH10OSP0CZ25 163 aa2.82□□□□□ -1.96
CDC42BPA-213ENST00000488131 PRLHP81277 87 aa2.82□□□□□ -1.96
CDC42BPA-213ENST00000488131 TENM2Q9NT68 2774 aa2.82□□□□□ -1.96
CDC42BPA-213ENST00000488131 CUBNO60494 3623 aa2.82□□□□□ -1.96
CDC42BPA-213ENST00000488131 ZFHX2Q9C0A1 2572 aaPredicted RBP2.81□□□□□ -1.96
CDC42BPA-213ENST00000488131 DNAH1Q9P2D7 4330 aa2.81□□□□□ -1.96
CDC42BPA-213ENST00000488131 ROMO1P60602 79 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms