RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 CUBNO60494 3623 aa-0.62□□□□□ -2.51
R3HDM1-219ENST00000488035 LYNX1G3V0Z9 82 aa-0.62□□□□□ -2.51
R3HDM1-219ENST00000488035 S100A8P05109 93 aa-0.62□□□□□ -2.51
R3HDM1-219ENST00000488035 RABAC1Q9UI14 185 aa-0.62□□□□□ -2.51
R3HDM1-219ENST00000488035 WDR87Q6ZQQ6 2873 aa-0.62□□□□□ -2.51
R3HDM1-219ENST00000488035 PKD1L3Q7Z443 1732 aa-0.62□□□□□ -2.51
R3HDM1-219ENST00000488035 FANCAO15360 1455 aa-0.62□□□□□ -2.51
R3HDM1-219ENST00000488035 SMIM13P0DJ93 91 aa-0.63□□□□□ -2.51
R3HDM1-219ENST00000488035 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.63□□□□□ -2.51
R3HDM1-219ENST00000488035 BIRC6Q9NR09 4857 aa-0.63□□□□□ -2.51
R3HDM1-219ENST00000488035 RGPD3A6NKT7 1758 aaPredicted RBP-0.63□□□□□ -2.51
R3HDM1-219ENST00000488035 RGPD4Q7Z3J3 1758 aa-0.63□□□□□ -2.51
R3HDM1-219ENST00000488035 HTTP42858 3142 aa-0.63□□□□□ -2.51
R3HDM1-219ENST00000488035 DSPP15924 2871 aaKnown RBP-0.63□□□□□ -2.51
R3HDM1-219ENST00000488035 MAGI3Q5TCQ9 1506 aa-0.64□□□□□ -2.51
R3HDM1-219ENST00000488035 QSER1Q2KHR3 1735 aa-0.64□□□□□ -2.51
R3HDM1-219ENST00000488035 RYR2Q92736 4967 aa-0.64□□□□□ -2.51
R3HDM1-219ENST00000488035 ACACBO00763 2458 aa-0.64□□□□□ -2.51
R3HDM1-219ENST00000488035 PLXNC1O60486 1568 aa-0.64□□□□□ -2.51
R3HDM1-219ENST00000488035 NWD1Q149M9 1564 aa-0.64□□□□□ -2.51
R3HDM1-219ENST00000488035 KANTRA0A1W2PQU2 76 aa-0.64□□□□□ -2.51
R3HDM1-219ENST00000488035 CRIP1P50238 77 aa-0.64□□□□□ -2.51
R3HDM1-219ENST00000488035 KRTAP19-5Q3LI72 72 aa-0.64□□□□□ -2.51
R3HDM1-219ENST00000488035 TDRG1Q3Y452 100 aa-0.64□□□□□ -2.51
R3HDM1-219ENST00000488035 V9GYS6 101 aa-0.64□□□□□ -2.51
R3HDM1-219ENST00000488035 MUC17Q685J3 4493 aa-0.64□□□□□ -2.51
R3HDM1-219ENST00000488035 KALRNO60229 2985 aa-0.64□□□□□ -2.51
R3HDM1-219ENST00000488035 RNF213Q63HN8 5207 aa-0.65□□□□□ -2.51
R3HDM1-219ENST00000488035 NBEAQ8NFP9 2946 aa-0.65□□□□□ -2.51
R3HDM1-219ENST00000488035 NBPF19A0A087WUL8 3843 aa-0.65□□□□□ -2.51
R3HDM1-219ENST00000488035 LCE6AA0A183 80 aa-0.65□□□□□ -2.51
R3HDM1-219ENST00000488035 PVALEFA0A1B0GWK0 134 aa-0.65□□□□□ -2.51
R3HDM1-219ENST00000488035 SFTA3P0C7M3 94 aa-0.65□□□□□ -2.51
R3HDM1-219ENST00000488035 WT1-ASQ06250 92 aa-0.65□□□□□ -2.51
R3HDM1-219ENST00000488035 MINOS1Q5TGZ0 78 aa-0.65□□□□□ -2.51
R3HDM1-219ENST00000488035 CLPSL2Q6UWE3 100 aa-0.65□□□□□ -2.51
R3HDM1-219ENST00000488035 URB2Q14146 1524 aaKnown RBP-0.65□□□□□ -2.51
R3HDM1-219ENST00000488035 DNAH9Q9NYC9 4486 aa-0.65□□□□□ -2.51
R3HDM1-219ENST00000488035 MYH4Q9Y623 1939 aa-0.66□□□□□ -2.51
R3HDM1-219ENST00000488035 DOT1LQ8TEK3 1739 aa-0.66□□□□□ -2.51
R3HDM1-219ENST00000488035 CEP290O15078 2479 aa-0.66□□□□□ -2.51
R3HDM1-219ENST00000488035 DNAH6Q9C0G6 4158 aa-0.66□□□□□ -2.52
R3HDM1-219ENST00000488035 DEFB131BA0A096LNP1 70 aa-0.66□□□□□ -2.52
R3HDM1-219ENST00000488035 ZZEF1O43149 2961 aa-0.66□□□□□ -2.52
R3HDM1-219ENST00000488035 MRPL33O75394 65 aaKnown RBP-0.66□□□□□ -2.52
R3HDM1-219ENST00000488035 TNP1P09430 55 aa-0.66□□□□□ -2.52
R3HDM1-219ENST00000488035 FCER1GP30273 86 aa-0.66□□□□□ -2.52
R3HDM1-219ENST00000488035 FAM186AA6NE01 2351 aa-0.66□□□□□ -2.52
R3HDM1-219ENST00000488035 CEP162Q5TB80 1403 aa-0.66□□□□□ -2.52
R3HDM1-219ENST00000488035 PKD1P98161 4303 aa-0.66□□□□□ -2.52
R3HDM1-219ENST00000488035 NBEAL2Q6ZNJ1 2754 aa-0.67□□□□□ -2.52
R3HDM1-219ENST00000488035 DEPDC5O75140 1603 aa-0.67□□□□□ -2.52
R3HDM1-219ENST00000488035 NESP48681 1621 aa-0.67□□□□□ -2.52
R3HDM1-219ENST00000488035 RIF1Q5UIP0 2472 aaKnown RBP-0.67□□□□□ -2.52
R3HDM1-219ENST00000488035 WIZO95785 1651 aa-0.67□□□□□ -2.52
R3HDM1-219ENST00000488035 ZNF831Q5JPB2 1677 aa-0.67□□□□□ -2.52
R3HDM1-219ENST00000488035 IGLV5-48A0A075B6I7 105 aa-0.67□□□□□ -2.52
R3HDM1-219ENST00000488035 MMP24-AS1A0A0U1RRL7 71 aa-0.67□□□□□ -2.52
R3HDM1-219ENST00000488035 H3BUT2 72 aa-0.67□□□□□ -2.52
R3HDM1-219ENST00000488035 H3BVH4 76 aa-0.67□□□□□ -2.52
R3HDM1-219ENST00000488035 SMR3BP02814 79 aaPredicted RBP-0.67□□□□□ -2.52
R3HDM1-219ENST00000488035 ADIRFQ15847 76 aa-0.67□□□□□ -2.52
R3HDM1-219ENST00000488035 ATP5EP2Q5VTU8 51 aa-0.67□□□□□ -2.52
R3HDM1-219ENST00000488035 ENHOQ6UWT2 76 aa-0.67□□□□□ -2.52
R3HDM1-219ENST00000488035 SUPT6HQ7KZ85 1726 aaKnown RBP-0.67□□□□□ -2.52
R3HDM1-219ENST00000488035 MYO3AQ8NEV4 1616 aa-0.67□□□□□ -2.52
R3HDM1-219ENST00000488035 POLR1AO95602 1720 aaPredicted RBP-0.68□□□□□ -2.52
R3HDM1-219ENST00000488035 RPS27P42677 84 aaKnown RBP-0.68□□□□□ -2.52
R3HDM1-219ENST00000488035 NCBP2-AS2Q69YL0 99 aa-0.68□□□□□ -2.52
R3HDM1-219ENST00000488035 RPS27LQ71UM5 84 aaKnown RBP-0.68□□□□□ -2.52
R3HDM1-219ENST00000488035 FAT3Q8TDW7 4589 aa-0.68□□□□□ -2.52
R3HDM1-219ENST00000488035 LYSTQ99698 3801 aa-0.68□□□□□ -2.52
R3HDM1-219ENST00000488035 UBL5Q9BZL1 73 aa-0.68□□□□□ -2.52
R3HDM1-219ENST00000488035 NIPBLQ6KC79 2804 aaeCLIP-0.68□□□□□ -2.52
R3HDM1-219ENST00000488035 VPS13DQ5THJ4 4388 aa-0.69□□□□□ -2.52
R3HDM1-219ENST00000488035 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.69□□□□□ -2.52
R3HDM1-219ENST00000488035 TEX15Q9BXT5 2789 aa-0.69□□□□□ -2.52
R3HDM1-219ENST00000488035 MT1XP80297 61 aa-0.69□□□□□ -2.52
R3HDM1-219ENST00000488035 DIP2BQ9P265 1576 aa-0.7□□□□□ -2.52
R3HDM1-219ENST00000488035 TRIOO75962 3097 aa-0.7□□□□□ -2.52
R3HDM1-219ENST00000488035 LTN1O94822 1766 aa-0.7□□□□□ -2.52
R3HDM1-219ENST00000488035 PKHD1L1Q86WI1 4243 aa-0.7□□□□□ -2.52
R3HDM1-219ENST00000488035 LAMA2P24043 3122 aaKnown RBP-0.7□□□□□ -2.52
R3HDM1-219ENST00000488035 VPS8Q8N3P4 1428 aa-0.7□□□□□ -2.52
R3HDM1-219ENST00000488035 BVES-AS1Q5T3Y7 98 aa-0.7□□□□□ -2.52
R3HDM1-219ENST00000488035 S100A13Q99584 98 aa-0.7□□□□□ -2.52
R3HDM1-219ENST00000488035 ST20Q9HBF5 79 aa-0.7□□□□□ -2.52
R3HDM1-219ENST00000488035 C6orf48Q9UBA6 75 aa-0.7□□□□□ -2.52
R3HDM1-219ENST00000488035 HFM1A2PYH4 1435 aa-0.71□□□□□ -2.52
R3HDM1-219ENST00000488035 TIAM2Q8IVF5 1701 aa-0.71□□□□□ -2.52
R3HDM1-219ENST00000488035 UBR1Q8IWV7 1749 aa-0.71□□□□□ -2.52
R3HDM1-219ENST00000488035 ETDCA0A1B0GVM5 59 aa-0.71□□□□□ -2.52
R3HDM1-219ENST00000488035 HMGA1P17096 107 aaKnown RBP-0.71□□□□□ -2.52
R3HDM1-219ENST00000488035 KCNQ1DNQ9H478 68 aa-0.71□□□□□ -2.52
R3HDM1-219ENST00000488035 PIK3C2BO00750 1634 aa-0.71□□□□□ -2.52
R3HDM1-219ENST00000488035 ARHGAP35Q9NRY4 1499 aa-0.72□□□□□ -2.52
R3HDM1-219ENST00000488035 USP9XQ93008 2570 aaPredicted RBP-0.72□□□□□ -2.52
R3HDM1-219ENST00000488035 ANKRD36CQ5JPF3 1778 aa-0.72□□□□□ -2.52
R3HDM1-219ENST00000488035 ANK3Q12955 4377 aaKnown RBP-0.72□□□□□ -2.52
R3HDM1-219ENST00000488035 H3BUA1 57 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms