RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 TIAM2Q8IVF5 1701 aa-0.1□□□□□ -2.42
SMC4-219ENST00000487747 ARAP2Q8WZ64 1704 aa-0.1□□□□□ -2.42
SMC4-219ENST00000487747 IFT172Q9UG01 1749 aa-0.1□□□□□ -2.42
SMC4-219ENST00000487747 TENM4Q6N022 2769 aa-0.1□□□□□ -2.42
SMC4-219ENST00000487747 SPTBN2O15020 2390 aa-0.1□□□□□ -2.42
SMC4-219ENST00000487747 MYO7AQ13402 2215 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 CACNA1CQ13936 2221 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 KIAA0100Q14667 2235 aaKnown RBP-0.1□□□□□ -2.43
SMC4-219ENST00000487747 WDFY3Q8IZQ1 3526 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 SBF2Q86WG5 1849 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 WNK3Q9BYP7 1800 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 IGF2RP11717 2491 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 ACACAQ13085 2346 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.1□□□□□ -2.437e-9■■■■■ 81.8
SMC4-219ENST00000487747 GCC2Q8IWJ2 1684 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 RELNP78509 3460 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 CSMD2Q7Z408 3487 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 PTPRFP10586 1907 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 AKAP11Q9UKA4 1901 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 NCOR1O75376 2440 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 TRAV23DV6A0A075B6W5 121 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 FAM236AA0A1B0GUQ0 79 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 UBE2L5PA0A1B0GUS4 154 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 FAM236BA0A1B0GV22 79 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 KANTRA0A1W2PQU2 76 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 TSTD3H0UI37 97 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 H3BUT2 72 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 K7ERU9 68 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 M0R233 179 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 M0R2T5 61 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 ATOX1O00244 68 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 MRPL33O75394 65 aaKnown RBP-0.1□□□□□ -2.43
SMC4-219ENST00000487747 DPM2O94777 84 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 TNNC2P02585 160 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 SMIM13P0DJ93 91 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 PLNP26678 52 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 GNG4P50150 75 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 GNG10P50151 68 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 ATP5EP56381 51 aaPredicted RBP-0.1□□□□□ -2.43
SMC4-219ENST00000487747 FXYD4P59646 89 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 GNG11P61952 73 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 GNGT1P63211 74 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 GNG5P63218 68 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 TPM4P67936 248 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 UBE2L3P68036 154 aaKnown RBP-0.1□□□□□ -2.43
SMC4-219ENST00000487747 MIR22HGQ0VDD5 57 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 CATR1Q13166 79 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 NREPQ16612 68 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 PIGYQ3MUY2 71 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 COL5A1-AS1Q5SY13 56 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 SPANXN1Q5VSR9 72 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 GOLT1AQ6ZVE7 132 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 TRAPPC6BQ86SZ2 158 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 C20orf197Q8N268 126 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 TOMM5Q8N4H5 51 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 FAM213BQ8TBF2 198 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 DYNLRB2Q8TF09 96 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 DYDC1Q8WWB3 177 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 BORCS8Q96FH0 119 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 LINC00208Q96KT6 92 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 C12orf57Q99622 126 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 DYNLRB1Q9NP97 96 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 GSKIPQ9P0R6 139 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 TRAPPC2LQ9UL33 140 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 PKIGQ9Y2B9 76 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 RGPD5Q99666 1765 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 DMDP11532 3685 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 FANCMQ8IYD8 2048 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 ABCA1O95477 2261 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 AHCTF1Q8WYP5 2266 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 CACNA1AO00555 2505 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 PIEZO1Q92508 2521 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 SRRM2Q9UQ35 2752 aaKnown RBP-0.1□□□□□ -2.43
SMC4-219ENST00000487747 CELSR1Q9NYQ6 3014 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 ANK1P16157 1881 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 PKD1L2Q7Z442 2459 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 MYH10P35580 1976 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 SCN8AQ9UQD0 1980 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 ABCA3Q99758 1704 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 ZANQ9Y493 2812 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 DNAH6Q9C0G6 4158 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 PTPRZ1P23471 2315 aaPredicted RBP-0.1□□□□□ -2.43
SMC4-219ENST00000487747 PTPRQQ9UMZ3 2332 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 PLXNB2O15031 1838 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 KIF1BO60333 1816 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 KIF20BQ96Q89 1820 aa-0.1□□□□□ -2.43
SMC4-219ENST00000487747 TENM2Q9NT68 2774 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 MYLKQ15746 1914 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 ATG2AQ2TAZ0 1938 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 MYO9AB2RTY4 2548 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.11□□□□□ -2.43
SMC4-219ENST00000487747 NCOR2Q9Y618 2525 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 LAMA2P24043 3122 aaKnown RBP-0.11□□□□□ -2.43
SMC4-219ENST00000487747 URB1O60287 2271 aaKnown RBP-0.11□□□□□ -2.43
SMC4-219ENST00000487747 ABCA4P78363 2273 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 NBASA2RRP1 2371 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 C2CD3Q4AC94 2353 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 ZDBF2Q9HCK1 2354 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 SMG1Q96Q15 3661 aaKnown RBP-0.11□□□□□ -2.43
SMC4-219ENST00000487747 SPTBN5Q9NRC6 3674 aaKnown RBP-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms