RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 SS18L2Q9UHA2 77 aa12.62□□□□□ -0.39
PHF1-209ENST00000487667 KRTAP10-2P60368 255 aa12.6□□□□□ -0.39
PHF1-209ENST00000487667 KRTAP13-1Q8IUC0 172 aa12.6□□□□□ -0.39
PHF1-209ENST00000487667 SPRR1BP22528 89 aa12.59□□□□□ -0.39
PHF1-209ENST00000487667 C9orf153Q5TBE3 101 aa12.59□□□□□ -0.39
PHF1-209ENST00000487667 LINC00336Q6ZUF6 198 aa12.59□□□□□ -0.39
PHF1-209ENST00000487667 HECTD4Q9Y4D8 3996 aa12.58□□□□□ -0.4
PHF1-209ENST00000487667 A0A087WVE0 104 aa12.57□□□□□ -0.4
PHF1-209ENST00000487667 SERP2Q8N6R1 65 aa12.57□□□□□ -0.4
PHF1-209ENST00000487667 FRAS1Q86XX4 4008 aa12.57□□□□□ -0.4
PHF1-209ENST00000487667 CRYGAP11844 174 aa12.56□□□□□ -0.4
PHF1-209ENST00000487667 Q6ZVQ6 151 aa12.56□□□□□ -0.4
PHF1-209ENST00000487667 CXCL6P80162 114 aa12.55□□□□□ -0.4
PHF1-209ENST00000487667 PSORS1C2Q9UIG4 136 aa12.55□□□□□ -0.4
PHF1-209ENST00000487667 C1orf137Q5JT78 98 aa12.54□□□□□ -0.4
PHF1-209ENST00000487667 SMIM29Q86T20 159 aa12.54□□□□□ -0.4
PHF1-209ENST00000487667 Q6ZSA8 131 aa12.54□□□□□ -0.4
PHF1-209ENST00000487667 ZNF706Q9Y5V0 76 aaPredicted RBP12.54□□□□□ -0.4
PHF1-209ENST00000487667 KMT2CQ8NEZ4 4911 aaKnown RBP12.53□□□□□ -0.4
PHF1-209ENST00000487667 IGLV8-61A0A075B6I0 122 aa12.52□□□□□ -0.4
PHF1-209ENST00000487667 RYR2Q92736 4967 aa12.51□□□□□ -0.41
PHF1-209ENST00000487667 ZNF861PO60384 105 aa12.49□□□□□ -0.41
PHF1-209ENST00000487667 CIRBP-AS1Q8TBR5 109 aa12.49□□□□□ -0.41
PHF1-209ENST00000487667 FAT2Q9NYQ8 4349 aa12.48□□□□□ -0.41
PHF1-209ENST00000487667 Q8NBF4 154 aa12.48□□□□□ -0.41
PHF1-209ENST00000487667 KRTAP10-1P60331 282 aa12.47□□□□□ -0.41
PHF1-209ENST00000487667 HAMPP81172 84 aa12.47□□□□□ -0.41
PHF1-209ENST00000487667 FAM30AQ9NZY2 134 aa12.46□□□□□ -0.42
PHF1-209ENST00000487667 SCXQ7RTU7 201 aa12.45□□□□□ -0.42
PHF1-209ENST00000487667 SPRR4Q96PI1 79 aa12.45□□□□□ -0.42
PHF1-209ENST00000487667 DNAH11Q96DT5 4516 aa12.44□□□□□ -0.42
PHF1-209ENST00000487667 IGLV7-43P04211 117 aa12.43□□□□□ -0.42
PHF1-209ENST00000487667 LINC00483Q53H64 154 aa12.43□□□□□ -0.42
PHF1-209ENST00000487667 SMIM20Q8N5G0 67 aa12.43□□□□□ -0.42
PHF1-209ENST00000487667 A0A1W2PNM2 257 aa12.43□□□□□ -0.42
PHF1-209ENST00000487667 RPL37AP61513 92 aaKnown RBP12.41□□□□□ -0.42
PHF1-209ENST00000487667 NREPQ16612 68 aa12.41□□□□□ -0.42
PHF1-209ENST00000487667 IGFL1Q6UW32 110 aa12.41□□□□□ -0.42
PHF1-209ENST00000487667 DNAH5Q8TE73 4624 aa12.39□□□□□ -0.43
PHF1-209ENST00000487667 DNAH8Q96JB1 4490 aa12.37□□□□□ -0.43
PHF1-209ENST00000487667 PKD1P98161 4303 aa12.37□□□□□ -0.43
PHF1-209ENST00000487667 TRAV7A0A075B6U4 112 aa12.36□□□□□ -0.43
PHF1-209ENST00000487667 TMEM258P61165 79 aa12.35□□□□□ -0.43
PHF1-209ENST00000487667 A0A1B0GVY2 172 aa12.33□□□□□ -0.44
PHF1-209ENST00000487667 RYR3Q15413 4870 aa12.33□□□□□ -0.44
PHF1-209ENST00000487667 BPY2O14599 106 aa12.29□□□□□ -0.44
PHF1-209ENST00000487667 RPS28P62857 69 aaKnown RBP12.27□□□□□ -0.44
PHF1-209ENST00000487667 CYSTM1Q9H1C7 97 aa12.27□□□□□ -0.44
PHF1-209ENST00000487667 IGLV9-49A0A0B4J1Y8 123 aa12.25□□□□□ -0.45
PHF1-209ENST00000487667 IGKV4-1P06312 121 aa12.23□□□□□ -0.45
PHF1-209ENST00000487667 A0A087WSZ3 146 aa12.23□□□□□ -0.45
PHF1-209ENST00000487667 J3KT08 172 aa12.21□□□□□ -0.45
PHF1-209ENST00000487667 C20orf197Q8N268 126 aa12.21□□□□□ -0.45
PHF1-209ENST00000487667 KLKP1Q107X0 134 aa12.21□□□□□ -0.46
PHF1-209ENST00000487667 A0A0G2JQZ4 141 aa12.2□□□□□ -0.46
PHF1-209ENST00000487667 PKHD1P08F94 4074 aa12.19□□□□□ -0.46
PHF1-209ENST00000487667 MOBPQ13875 183 aa12.18□□□□□ -0.46
PHF1-209ENST00000487667 SRRM2Q9UQ35 2752 aaKnown RBP12.18□□□□□ -0.46
PHF1-209ENST00000487667 FAM229BQ4G0N7 80 aa12.17□□□□□ -0.46
PHF1-209ENST00000487667 SSBP3-AS1Q7Z2R9 100 aa12.17□□□□□ -0.46
PHF1-209ENST00000487667 LRP1BQ9NZR2 4599 aa12.13□□□□□ -0.47
PHF1-209ENST00000487667 NDUFC1O43677 76 aa12.13□□□□□ -0.47
PHF1-209ENST00000487667 ANAPC11Q9NYG5 84 aa12.13□□□□□ -0.47
PHF1-209ENST00000487667 DYNC1H1Q14204 4646 aaKnown RBP12.12□□□□□ -0.47
PHF1-209ENST00000487667 CD164Q04900 197 aa12.12□□□□□ -0.47
PHF1-209ENST00000487667 Q8N9L7 120 aa12.12□□□□□ -0.47
PHF1-209ENST00000487667 H7BZZ5 65 aa12.11□□□□□ -0.47
PHF1-209ENST00000487667 SPINK6Q6UWN8 80 aa12.09□□□□□ -0.47
PHF1-209ENST00000487667 OCR1Q9BZK8 76 aa12.09□□□□□ -0.47
PHF1-209ENST00000487667 DSCR10P59022 87 aa12.08□□□□□ -0.48
PHF1-209ENST00000487667 LINC00472Q9H8W2 130 aa12.07□□□□□ -0.48
PHF1-209ENST00000487667 FAM236DA0A1B0GTK5 79 aa12.06□□□□□ -0.48
PHF1-209ENST00000487667 FAM236CP0DP71 79 aa12.06□□□□□ -0.48
PHF1-209ENST00000487667 TMEM254Q8TBM7 123 aa12.03□□□□□ -0.48
PHF1-209ENST00000487667 SNURFQ9Y675 71 aa12.01□□□□□ -0.49
PHF1-209ENST00000487667 K7EQZ3 153 aa12.01□□□□□ -0.49
PHF1-209ENST00000487667 KRTAP1-4P0C5Y4 121 aa12.01□□□□□ -0.49
PHF1-209ENST00000487667 HRCT1Q6UXD1 115 aa12.01□□□□□ -0.49
PHF1-209ENST00000487667 A8MWP4 228 aa12□□□□□ -0.49
PHF1-209ENST00000487667 ATP5EP56381 51 aaPredicted RBP12□□□□□ -0.49
PHF1-209ENST00000487667 NDUFB1O75438 58 aa11.99□□□□□ -0.49
PHF1-209ENST00000487667 A0A087X002 238 aa11.98□□□□□ -0.49
PHF1-209ENST00000487667 A0A0U1RQV1 116 aa11.98□□□□□ -0.49
PHF1-209ENST00000487667 SMR3BP02814 79 aaPredicted RBP11.98□□□□□ -0.49
PHF1-209ENST00000487667 PLA2G1BP04054 148 aaKnown RBP11.98□□□□□ -0.49
PHF1-209ENST00000487667 DEFB116Q30KQ4 102 aa11.98□□□□□ -0.49
PHF1-209ENST00000487667 PRR15Q8IV56 129 aa11.96□□□□□ -0.49
PHF1-209ENST00000487667 SERP1Q9Y6X1 66 aa11.96□□□□□ -0.49
PHF1-209ENST00000487667 APOBP04114 4563 aaKnown RBP11.96□□□□□ -0.49
PHF1-209ENST00000487667 KRTAP13-2Q52LG2 175 aa11.96□□□□□ -0.5
PHF1-209ENST00000487667 HCG22E2RYF7 251 aa11.95□□□□□ -0.5
PHF1-209ENST00000487667 ASB16-AS1Q495Z4 193 aa11.95□□□□□ -0.5
PHF1-209ENST00000487667 SVIPQ8NHG7 77 aa11.95□□□□□ -0.5
PHF1-209ENST00000487667 Q96NJ1 140 aa11.94□□□□□ -0.5
PHF1-209ENST00000487667 Q5XG85 94 aa11.93□□□□□ -0.5
PHF1-209ENST00000487667 CDK2AP2O75956 126 aa11.92□□□□□ -0.5
PHF1-209ENST00000487667 OXTP01178 125 aa11.92□□□□□ -0.5
PHF1-209ENST00000487667 VPS13BQ7Z7G8 4022 aa11.91□□□□□ -0.5
PHF1-209ENST00000487667 TYMSOSQ8TAI1 123 aa11.9□□□□□ -0.51
PHF1-209ENST00000487667 EPPK1P58107 5090 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms