RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 A0A1B0GWB2 263 aa4.05□□□□□ -1.76
UBE4B-209ENST00000487244 Q1RN00 199 aa4.05□□□□□ -1.76
UBE4B-209ENST00000487244 SPATA45Q537H7 98 aa4.05□□□□□ -1.76
UBE4B-209ENST00000487244 DEFB105AQ8NG35 78 aa4.05□□□□□ -1.76
UBE4B-209ENST00000487244 DLEU1O43261 78 aa4.04□□□□□ -1.76
UBE4B-209ENST00000487244 SPINK1P00995 79 aa4.04□□□□□ -1.76
UBE4B-209ENST00000487244 IGKV2-30P06310 120 aa4.04□□□□□ -1.76
UBE4B-209ENST00000487244 LINC01547P58512 204 aaPredicted RBP4.04□□□□□ -1.76
UBE4B-209ENST00000487244 CTAG1AP78358 180 aa4.04□□□□□ -1.76
UBE4B-209ENST00000487244 C2orf91Q6ZV80 131 aa4.04□□□□□ -1.76
UBE4B-209ENST00000487244 SSBP3-AS1Q7Z2R9 100 aa4.04□□□□□ -1.76
UBE4B-209ENST00000487244 Q8N377 158 aa4.04□□□□□ -1.76
UBE4B-209ENST00000487244 HIST1H4GQ99525 98 aa4.04□□□□□ -1.76
UBE4B-209ENST00000487244 VAMP8Q9BV40 100 aa4.04□□□□□ -1.76
UBE4B-209ENST00000487244 A0A0G2JQZ4 141 aa4.03□□□□□ -1.76
UBE4B-209ENST00000487244 TAL2Q16559 108 aa4.03□□□□□ -1.76
UBE4B-209ENST00000487244 TPRXLQ17RH7 258 aa4.03□□□□□ -1.76
UBE4B-209ENST00000487244 SMIM29Q86T20 159 aa4.03□□□□□ -1.76
UBE4B-209ENST00000487244 Q8N9P0 234 aaPredicted RBP4.03□□□□□ -1.76
UBE4B-209ENST00000487244 IGLV5-48A0A075B6I7 105 aa4.02□□□□□ -1.77
UBE4B-209ENST00000487244 TEX49A0A1B0GTD5 131 aa4.02□□□□□ -1.77
UBE4B-209ENST00000487244 PYY3Q5JQD4 70 aa4.02□□□□□ -1.77
UBE4B-209ENST00000487244 HRCT1Q6UXD1 115 aa4.02□□□□□ -1.77
UBE4B-209ENST00000487244 MUC2Q02817 5179 aa4.01□□□□□ -1.77
UBE4B-209ENST00000487244 CFC1BP0CG36 223 aa4.01□□□□□ -1.77
UBE4B-209ENST00000487244 CFC1P0CG37 223 aa4.01□□□□□ -1.77
UBE4B-209ENST00000487244 RPS29P62273 56 aaKnown RBP4.01□□□□□ -1.77
UBE4B-209ENST00000487244 KRTAP13-3Q3SY46 172 aa4.01□□□□□ -1.77
UBE4B-209ENST00000487244 SLC25A34Q6PIV7 304 aa4.01□□□□□ -1.77
UBE4B-209ENST00000487244 LINC00575Q6W349 94 aa4.01□□□□□ -1.77
UBE4B-209ENST00000487244 FP248Q71RG6 208 aaPredicted RBP4.01□□□□□ -1.77
UBE4B-209ENST00000487244 KRTAP9-8Q9BYQ0 159 aa4.01□□□□□ -1.77
UBE4B-209ENST00000487244 HIGD1BQ9P298 99 aa4.01□□□□□ -1.77
UBE4B-209ENST00000487244 LAMTOR3Q9UHA4 124 aa4.01□□□□□ -1.77
UBE4B-209ENST00000487244 H7C2G1 150 aa4□□□□□ -1.77
UBE4B-209ENST00000487244 SLC25A20O43772 301 aa3.99□□□□□ -1.77
UBE4B-209ENST00000487244 VAMP3Q15836 100 aa3.99□□□□□ -1.77
UBE4B-209ENST00000487244 Q6ZQY7 126 aa3.99□□□□□ -1.77
UBE4B-209ENST00000487244 NHP2Q9NX24 153 aaKnown RBP3.99□□□□□ -1.77
UBE4B-209ENST00000487244 hADV29S1A0JD25 119 aa3.98□□□□□ -1.77
UBE4B-209ENST00000487244 FXYD2P54710 66 aa3.98□□□□□ -1.77
UBE4B-209ENST00000487244 CEND1Q8N111 149 aa3.98□□□□□ -1.77
UBE4B-209ENST00000487244 A0A0B4J2C4 111 aa3.97□□□□□ -1.77
UBE4B-209ENST00000487244 RAB37Q96AX2 223 aa3.97□□□□□ -1.77
UBE4B-209ENST00000487244 FAM218AQ96MZ4 157 aa3.97□□□□□ -1.77
UBE4B-209ENST00000487244 PRO1933Q9H354 126 aa3.97□□□□□ -1.77
UBE4B-209ENST00000487244 BVES-AS1Q5T3Y7 98 aa3.96□□□□□ -1.78
UBE4B-209ENST00000487244 K7ERJ3 54 aa3.95□□□□□ -1.78
UBE4B-209ENST00000487244 CD164Q04900 197 aa3.95□□□□□ -1.78
UBE4B-209ENST00000487244 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.95□□□□□ -1.78
UBE4B-209ENST00000487244 LIMD2Q9BT23 127 aa3.95□□□□□ -1.78
UBE4B-209ENST00000487244 F8WEM9 126 aa3.94□□□□□ -1.78
UBE4B-209ENST00000487244 HSD52Q0P140 79 aa3.94□□□□□ -1.78
UBE4B-209ENST00000487244 IGFL1Q6UW32 110 aa3.94□□□□□ -1.78
UBE4B-209ENST00000487244 PRO1854Q9UHT4 67 aa3.94□□□□□ -1.78
UBE4B-209ENST00000487244 IGLV8-61A0A075B6I0 122 aa3.93□□□□□ -1.78
UBE4B-209ENST00000487244 H3BUT2 72 aa3.93□□□□□ -1.78
UBE4B-209ENST00000487244 C1orf195Q5TG92 126 aa3.93□□□□□ -1.78
UBE4B-209ENST00000487244 MPLKIPQ8TAP9 179 aa3.93□□□□□ -1.78
UBE4B-209ENST00000487244 KRTAP4-1Q9BYQ7 146 aa3.93□□□□□ -1.78
UBE4B-209ENST00000487244 C9orf92A6NGG3 77 aa3.92□□□□□ -1.78
UBE4B-209ENST00000487244 ASB16-AS1Q495Z4 193 aa3.92□□□□□ -1.78
UBE4B-209ENST00000487244 OCIAD2Q56VL3 154 aa3.92□□□□□ -1.78
UBE4B-209ENST00000487244 Q5XG85 94 aa3.92□□□□□ -1.78
UBE4B-209ENST00000487244 CLEC2BQ92478 149 aa3.92□□□□□ -1.78
UBE4B-209ENST00000487244 UQCR10Q9UDW1 63 aa3.92□□□□□ -1.78
UBE4B-209ENST00000487244 H0YGX0 51 aa3.91□□□□□ -1.78
UBE4B-209ENST00000487244 PPDPFLQ8WWR9 84 aa3.91□□□□□ -1.78
UBE4B-209ENST00000487244 SNHG12Q9BXW3 62 aa3.91□□□□□ -1.78
UBE4B-209ENST00000487244 TRBV7-7A0A0K0K1E9 115 aa3.9□□□□□ -1.79
UBE4B-209ENST00000487244 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.79
UBE4B-209ENST00000487244 Q6JHZ5 121 aa3.9□□□□□ -1.79
UBE4B-209ENST00000487244 MUC17Q685J3 4493 aa3.9□□□□□ -1.79
UBE4B-209ENST00000487244 NDUFV3P56181 108 aaKnown RBP3.89□□□□□ -1.79
UBE4B-209ENST00000487244 FAT4Q6V0I7 4981 aa3.89□□□□□ -1.79
UBE4B-209ENST00000487244 TCL1BO95988 128 aa3.88□□□□□ -1.79
UBE4B-209ENST00000487244 PSMB2P49721 201 aa3.88□□□□□ -1.79
UBE4B-209ENST00000487244 SEC61BP60468 96 aaKnown RBP3.88□□□□□ -1.79
UBE4B-209ENST00000487244 A0A1B0GV72 72 aa3.87□□□□□ -1.79
UBE4B-209ENST00000487244 A0A1B0GX51 115 aa3.87□□□□□ -1.79
UBE4B-209ENST00000487244 FABP2P12104 132 aa3.87□□□□□ -1.79
UBE4B-209ENST00000487244 A0A0U1RQV1 116 aa3.86□□□□□ -1.79
UBE4B-209ENST00000487244 H3BMG7 143 aa3.86□□□□□ -1.79
UBE4B-209ENST00000487244 SNCGO76070 127 aa3.86□□□□□ -1.79
UBE4B-209ENST00000487244 PCOTHQ58A44 107 aa3.86□□□□□ -1.79
UBE4B-209ENST00000487244 IGKV2D-30A0A075B6S6 120 aa3.85□□□□□ -1.79
UBE4B-209ENST00000487244 SMIM6P0DI80 62 aa3.85□□□□□ -1.79
UBE4B-209ENST00000487244 NAA38Q9BRA0 125 aaKnown RBP3.85□□□□□ -1.79
UBE4B-209ENST00000487244 A0A1W2PNM2 257 aa3.84□□□□□ -1.79
UBE4B-209ENST00000487244 DNAL4O96015 105 aa3.84□□□□□ -1.79
UBE4B-209ENST00000487244 Q6Q795 121 aa3.84□□□□□ -1.79
UBE4B-209ENST00000487244 ORMDL1Q9P0S3 153 aa3.84□□□□□ -1.79
UBE4B-209ENST00000487244 A0A087WSZ3 146 aa3.83□□□□□ -1.8
UBE4B-209ENST00000487244 LOC105371267A0A1B0GV96 52 aa3.83□□□□□ -1.8
UBE4B-209ENST00000487244 LST1O00453 97 aa3.83□□□□□ -1.8
UBE4B-209ENST00000487244 COX6CP09669 75 aa3.83□□□□□ -1.8
UBE4B-209ENST00000487244 TEN1Q86WV5 123 aa3.83□□□□□ -1.8
UBE4B-209ENST00000487244 TRACP01848 142 aa3.82□□□□□ -1.8
UBE4B-209ENST00000487244 SCGB1C2P0DMR2 95 aa3.82□□□□□ -1.8
UBE4B-209ENST00000487244 RPL37P61927 97 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms