RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 KRTAP9-7A8MTY7 169 aa10.22□□□□□ -0.77
SMPDL3A-202ENST00000487215 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.22□□□□□ -0.77
SMPDL3A-202ENST00000487215 ATOH7Q8N100 152 aa10.22□□□□□ -0.77
SMPDL3A-202ENST00000487215 VAMP3Q15836 100 aa10.21□□□□□ -0.77
SMPDL3A-202ENST00000487215 PCP2Q8IVA1 136 aa10.21□□□□□ -0.77
SMPDL3A-202ENST00000487215 TCL1BO95988 128 aa10.19□□□□□ -0.78
SMPDL3A-202ENST00000487215 SMIM11BQ8TCY0 68 aa10.19□□□□□ -0.78
SMPDL3A-202ENST00000487215 F8WEM9 126 aa10.18□□□□□ -0.78
SMPDL3A-202ENST00000487215 SSPOA2VEC9 5147 aa10.17□□□□□ -0.78
SMPDL3A-202ENST00000487215 USH2AO75445 5202 aa10.16□□□□□ -0.78
SMPDL3A-202ENST00000487215 HSBP1L1C9JCN9 74 aa10.14□□□□□ -0.79
SMPDL3A-202ENST00000487215 Q6Q795 121 aa10.14□□□□□ -0.79
SMPDL3A-202ENST00000487215 Q6JHZ5 121 aa10.11□□□□□ -0.79
SMPDL3A-202ENST00000487215 LINC00575Q6W349 94 aa10.11□□□□□ -0.79
SMPDL3A-202ENST00000487215 S100A2P29034 98 aa10.1□□□□□ -0.79
SMPDL3A-202ENST00000487215 hADV29S1A0JD25 119 aa10.09□□□□□ -0.79
SMPDL3A-202ENST00000487215 Q6ZQY7 126 aa10.07□□□□□ -0.8
SMPDL3A-202ENST00000487215 CFC1P0CG37 223 aa10.06□□□□□ -0.8
SMPDL3A-202ENST00000487215 CLEC2BQ92478 149 aa10.06□□□□□ -0.8
SMPDL3A-202ENST00000487215 ATP11AUNQ6ZP68 121 aa10.05□□□□□ -0.8
SMPDL3A-202ENST00000487215 KRTAP9-8Q9BYQ0 159 aa10.05□□□□□ -0.8
SMPDL3A-202ENST00000487215 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.04□□□□□ -0.8
SMPDL3A-202ENST00000487215 Q75L30 129 aa10.04□□□□□ -0.8
SMPDL3A-202ENST00000487215 HIST3H2BBQ8N257 126 aa10.04□□□□□ -0.8
SMPDL3A-202ENST00000487215 PPDPFLQ8WWR9 84 aa10.04□□□□□ -0.8
SMPDL3A-202ENST00000487215 HIST1H2BLQ99880 126 aa10.04□□□□□ -0.8
SMPDL3A-202ENST00000487215 TRBV7-7A0A0K0K1E9 115 aa10.03□□□□□ -0.8
SMPDL3A-202ENST00000487215 OCIAD2Q56VL3 154 aa10.03□□□□□ -0.8
SMPDL3A-202ENST00000487215 BVES-AS1Q5T3Y7 98 aa10.03□□□□□ -0.8
SMPDL3A-202ENST00000487215 OBSCN-AS1Q96MR7 158 aa10.02□□□□□ -0.81
SMPDL3A-202ENST00000487215 SCGB1D1O95968 90 aa10□□□□□ -0.81
SMPDL3A-202ENST00000487215 IGFL1Q6UW32 110 aa10□□□□□ -0.81
SMPDL3A-202ENST00000487215 SNHG12Q9BXW3 62 aa10□□□□□ -0.81
SMPDL3A-202ENST00000487215 S100A6P06703 90 aa9.99□□□□□ -0.81
SMPDL3A-202ENST00000487215 HIST1H4GQ99525 98 aa9.99□□□□□ -0.81
SMPDL3A-202ENST00000487215 SNCGO76070 127 aa9.98□□□□□ -0.81
SMPDL3A-202ENST00000487215 FCGBPQ9Y6R7 5405 aaPredicted RBP9.96□□□□□ -0.81
SMPDL3A-202ENST00000487215 C12orf57Q99622 126 aa9.94□□□□□ -0.82
SMPDL3A-202ENST00000487215 LST1O00453 97 aa9.93□□□□□ -0.82
SMPDL3A-202ENST00000487215 COX8AP10176 69 aa9.92□□□□□ -0.82
SMPDL3A-202ENST00000487215 SS18L2Q9UHA2 77 aa9.91□□□□□ -0.82
SMPDL3A-202ENST00000487215 DLEU1O43261 78 aa9.9□□□□□ -0.82
SMPDL3A-202ENST00000487215 Q96NJ1 140 aa9.9□□□□□ -0.82
SMPDL3A-202ENST00000487215 RAB37Q96AX2 223 aa9.89□□□□□ -0.83
SMPDL3A-202ENST00000487215 H0YGX0 51 aa9.88□□□□□ -0.83
SMPDL3A-202ENST00000487215 H3BUT2 72 aa9.88□□□□□ -0.83
SMPDL3A-202ENST00000487215 GHRHP01286 108 aa9.88□□□□□ -0.83
SMPDL3A-202ENST00000487215 S100A1P23297 94 aa9.88□□□□□ -0.83
SMPDL3A-202ENST00000487215 MT2AP02795 61 aa9.86□□□□□ -0.83
SMPDL3A-202ENST00000487215 C20orf166-AS1Q96NR2 134 aa9.86□□□□□ -0.83
SMPDL3A-202ENST00000487215 TRBV20-1A0A075B6N2 111 aa9.85□□□□□ -0.83
SMPDL3A-202ENST00000487215 TEN1Q86WV5 123 aa9.85□□□□□ -0.83
SMPDL3A-202ENST00000487215 KRTAP19-1Q8IUB9 90 aa9.85□□□□□ -0.83
SMPDL3A-202ENST00000487215 A8MUU9 505 aa9.83□□□□□ -0.84
SMPDL3A-202ENST00000487215 HIGD1BQ9P298 99 aa9.83□□□□□ -0.84
SMPDL3A-202ENST00000487215 A0A0B4J2C4 111 aa9.82□□□□□ -0.84
SMPDL3A-202ENST00000487215 NDUFV3P56181 108 aaKnown RBP9.82□□□□□ -0.84
SMPDL3A-202ENST00000487215 SMCPP49901 116 aaPredicted RBP9.81□□□□□ -0.84
SMPDL3A-202ENST00000487215 A0A1B0GX51 115 aa9.79□□□□□ -0.84
SMPDL3A-202ENST00000487215 MT1FP04733 61 aa9.79□□□□□ -0.84
SMPDL3A-202ENST00000487215 C14orf144Q96I85 54 aa9.79□□□□□ -0.84
SMPDL3A-202ENST00000487215 MACF1Q9UPN3 7388 aaKnown RBP9.76□□□□□ -0.85
SMPDL3A-202ENST00000487215 TMEM238LA0A1B0GVL6 79 aa9.76□□□□□ -0.85
SMPDL3A-202ENST00000487215 A6NJY4 79 aa9.76□□□□□ -0.85
SMPDL3A-202ENST00000487215 H3BMG7 143 aa9.76□□□□□ -0.85
SMPDL3A-202ENST00000487215 SPATA45Q537H7 98 aa9.76□□□□□ -0.85
SMPDL3A-202ENST00000487215 A0A087WSZ3 146 aa9.75□□□□□ -0.85
SMPDL3A-202ENST00000487215 FAM218AQ96MZ4 157 aa9.75□□□□□ -0.85
SMPDL3A-202ENST00000487215 KRTAP9-3Q9BYQ3 159 aa9.75□□□□□ -0.85
SMPDL3A-202ENST00000487215 PAM16Q9Y3D7 125 aa9.75□□□□□ -0.85
SMPDL3A-202ENST00000487215 FABP2P12104 132 aa9.74□□□□□ -0.85
SMPDL3A-202ENST00000487215 VAMP8Q9BV40 100 aa9.74□□□□□ -0.85
SMPDL3A-202ENST00000487215 PRO1854Q9UHT4 67 aa9.74□□□□□ -0.85
SMPDL3A-202ENST00000487215 CEND1Q8N111 149 aa9.73□□□□□ -0.85
SMPDL3A-202ENST00000487215 FAM236DA0A1B0GTK5 79 aa9.72□□□□□ -0.85
SMPDL3A-202ENST00000487215 FAM236CP0DP71 79 aa9.72□□□□□ -0.85
SMPDL3A-202ENST00000487215 H3BQ85 93 aa9.7□□□□□ -0.86
SMPDL3A-202ENST00000487215 KRTAP10-10P60014 251 aa9.7□□□□□ -0.86
SMPDL3A-202ENST00000487215 C2orf91Q6ZV80 131 aa9.7□□□□□ -0.86
SMPDL3A-202ENST00000487215 SYNE2Q8WXH0 6885 aaKnown RBP9.7□□□□□ -0.86
SMPDL3A-202ENST00000487215 KRTAP16-1A8MUX0 517 aa9.69□□□□□ -0.86
SMPDL3A-202ENST00000487215 DSCR10P59022 87 aa9.69□□□□□ -0.86
SMPDL3A-202ENST00000487215 SIGMAR1Q99720 223 aa9.67□□□□□ -0.86
SMPDL3A-202ENST00000487215 DNAL4O96015 105 aa9.66□□□□□ -0.86
SMPDL3A-202ENST00000487215 ANKRD29Q8N6D5 301 aa9.65□□□□□ -0.86
SMPDL3A-202ENST00000487215 MPLKIPQ8TAP9 179 aa9.65□□□□□ -0.86
SMPDL3A-202ENST00000487215 TRBV7-4A0A0J9YYF1 115 aa9.64□□□□□ -0.87
SMPDL3A-202ENST00000487215 A0A1W2PNM2 257 aa9.64□□□□□ -0.87
SMPDL3A-202ENST00000487215 LINC00313P59037 77 aa9.64□□□□□ -0.87
SMPDL3A-202ENST00000487215 ORMDL1Q9P0S3 153 aa9.64□□□□□ -0.87
SMPDL3A-202ENST00000487215 TRIAP1O43715 76 aa9.63□□□□□ -0.87
SMPDL3A-202ENST00000487215 HRES1P13985 223 aa9.63□□□□□ -0.87
SMPDL3A-202ENST00000487215 FXYD2P54710 66 aa9.62□□□□□ -0.87
SMPDL3A-202ENST00000487215 RBM12B-AS1Q9P1G2 102 aa9.62□□□□□ -0.87
SMPDL3A-202ENST00000487215 TMEM256-PLSCR3K7ERE1 68 aa9.61□□□□□ -0.87
SMPDL3A-202ENST00000487215 IGKV4-1P06312 121 aa9.61□□□□□ -0.87
SMPDL3A-202ENST00000487215 COX6CP09669 75 aa9.61□□□□□ -0.87
SMPDL3A-202ENST00000487215 PSMB2P49721 201 aa9.59□□□□□ -0.87
SMPDL3A-202ENST00000487215 HSD52Q0P140 79 aa9.56□□□□□ -0.88
SMPDL3A-202ENST00000487215 TRACP01848 142 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms