RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 DEFB105AQ8NG35 78 aa4.39□□□□□ -1.71
SF3A3-206ENST00000487062 KRTAP17-1Q9BYP8 105 aa4.39□□□□□ -1.71
SF3A3-206ENST00000487062 IGLV5-48A0A075B6I7 105 aa4.38□□□□□ -1.71
SF3A3-206ENST00000487062 GAGE2AQ6NT46 116 aa4.38□□□□□ -1.71
SF3A3-206ENST00000487062 SMCR5Q8TEV8 140 aa4.38□□□□□ -1.71
SF3A3-206ENST00000487062 DSCR8Q96T75 97 aa4.38□□□□□ -1.71
SF3A3-206ENST00000487062 HIGD2AQ9BW72 106 aa4.38□□□□□ -1.71
SF3A3-206ENST00000487062 KMT2AQ03164 3969 aa4.37□□□□□ -1.71
SF3A3-206ENST00000487062 LOC110117498A0A087WWA1 95 aa4.37□□□□□ -1.71
SF3A3-206ENST00000487062 ERC2-IT1O76042 136 aa4.37□□□□□ -1.71
SF3A3-206ENST00000487062 CCKP06307 115 aa4.37□□□□□ -1.71
SF3A3-206ENST00000487062 KRTAP11-1Q8IUC1 163 aa4.37□□□□□ -1.71
SF3A3-206ENST00000487062 Q8N377 158 aa4.37□□□□□ -1.71
SF3A3-206ENST00000487062 TRBV7-7A0A0K0K1E9 115 aa4.36□□□□□ -1.71
SF3A3-206ENST00000487062 LINC01547P58512 204 aaPredicted RBP4.36□□□□□ -1.71
SF3A3-206ENST00000487062 ST20-AS1Q8NBB2 130 aa4.36□□□□□ -1.71
SF3A3-206ENST00000487062 TRBV7-4A0A0J9YYF1 115 aa4.35□□□□□ -1.71
SF3A3-206ENST00000487062 F8WEM9 126 aa4.35□□□□□ -1.71
SF3A3-206ENST00000487062 KRTAP10-1P60331 282 aa4.35□□□□□ -1.71
SF3A3-206ENST00000487062 C1orf137Q5JT78 98 aa4.35□□□□□ -1.71
SF3A3-206ENST00000487062 Q6ZQT0 140 aa4.35□□□□□ -1.71
SF3A3-206ENST00000487062 Q6ZSA8 131 aa4.35□□□□□ -1.71
SF3A3-206ENST00000487062 CIRBP-AS1Q8TBR5 109 aa4.35□□□□□ -1.71
SF3A3-206ENST00000487062 PSORS1C2Q9UIG4 136 aa4.35□□□□□ -1.71
SF3A3-206ENST00000487062 HECTD4Q9Y4D8 3996 aa4.34□□□□□ -1.71
SF3A3-206ENST00000487062 FRAS1Q86XX4 4008 aa4.34□□□□□ -1.71
SF3A3-206ENST00000487062 SCXQ7RTU7 201 aa4.34□□□□□ -1.71
SF3A3-206ENST00000487062 LINC00643Q86TS7 51 aa4.34□□□□□ -1.71
SF3A3-206ENST00000487062 KRTAP13-1Q8IUC0 172 aa4.34□□□□□ -1.71
SF3A3-206ENST00000487062 ZNF706Q9Y5V0 76 aaPredicted RBP4.34□□□□□ -1.71
SF3A3-206ENST00000487062 ZNF861PO60384 105 aa4.33□□□□□ -1.72
SF3A3-206ENST00000487062 SPRR1BP22528 89 aa4.33□□□□□ -1.72
SF3A3-206ENST00000487062 C3orf22Q8N5N4 141 aa4.32□□□□□ -1.72
SF3A3-206ENST00000487062 DNAH11Q96DT5 4516 aa4.31□□□□□ -1.72
SF3A3-206ENST00000487062 A0A1B0GVY2 172 aa4.31□□□□□ -1.72
SF3A3-206ENST00000487062 A0A1B0GW54 56 aa4.31□□□□□ -1.72
SF3A3-206ENST00000487062 IGLV7-43P04211 117 aa4.31□□□□□ -1.72
SF3A3-206ENST00000487062 Q75L30 129 aa4.31□□□□□ -1.72
SF3A3-206ENST00000487062 SMIM29Q86T20 159 aa4.31□□□□□ -1.72
SF3A3-206ENST00000487062 UBL5Q9BZL1 73 aa4.31□□□□□ -1.72
SF3A3-206ENST00000487062 SS18L2Q9UHA2 77 aa4.31□□□□□ -1.72
SF3A3-206ENST00000487062 SACSQ9NZJ4 4579 aa4.31□□□□□ -1.72
SF3A3-206ENST00000487062 IGLV8-61A0A075B6I0 122 aa4.3□□□□□ -1.72
SF3A3-206ENST00000487062 Q6JHZ5 121 aa4.3□□□□□ -1.72
SF3A3-206ENST00000487062 SPRR4Q96PI1 79 aa4.3□□□□□ -1.72
SF3A3-206ENST00000487062 KRTAP3-1Q9BYR8 98 aa4.3□□□□□ -1.72
SF3A3-206ENST00000487062 LINC00846Q9NV44 126 aa4.3□□□□□ -1.72
SF3A3-206ENST00000487062 PKD1P98161 4303 aa4.3□□□□□ -1.72
SF3A3-206ENST00000487062 HYDINQ4G0P3 5121 aa4.29□□□□□ -1.72
SF3A3-206ENST00000487062 UQCRQO14949 82 aa4.29□□□□□ -1.72
SF3A3-206ENST00000487062 CCDC179H3BU77 68 aa4.28□□□□□ -1.72
SF3A3-206ENST00000487062 LINC00483Q53H64 154 aa4.28□□□□□ -1.72
SF3A3-206ENST00000487062 ATP5EP2Q5VTU8 51 aa4.28□□□□□ -1.72
SF3A3-206ENST00000487062 Q8NBF4 154 aa4.28□□□□□ -1.72
SF3A3-206ENST00000487062 DNAH8Q96JB1 4490 aa4.28□□□□□ -1.72
SF3A3-206ENST00000487062 ATOX1O00244 68 aa4.27□□□□□ -1.73
SF3A3-206ENST00000487062 RPL37AP61513 92 aaKnown RBP4.27□□□□□ -1.73
SF3A3-206ENST00000487062 HAMPP81172 84 aa4.27□□□□□ -1.73
SF3A3-206ENST00000487062 IGFL1Q6UW32 110 aa4.27□□□□□ -1.73
SF3A3-206ENST00000487062 FAT2Q9NYQ8 4349 aa4.27□□□□□ -1.73
SF3A3-206ENST00000487062 DNAH5Q8TE73 4624 aa4.26□□□□□ -1.73
SF3A3-206ENST00000487062 FAM236AA0A1B0GUQ0 79 aa4.26□□□□□ -1.73
SF3A3-206ENST00000487062 FAM236BA0A1B0GV22 79 aa4.26□□□□□ -1.73
SF3A3-206ENST00000487062 A0A1W2PNM2 257 aa4.26□□□□□ -1.73
SF3A3-206ENST00000487062 SEC61BP60468 96 aaKnown RBP4.26□□□□□ -1.73
SF3A3-206ENST00000487062 C9orf153Q5TBE3 101 aa4.26□□□□□ -1.73
SF3A3-206ENST00000487062 Q6ZVQ6 151 aa4.26□□□□□ -1.73
SF3A3-206ENST00000487062 IGLV9-49A0A0B4J1Y8 123 aa4.25□□□□□ -1.73
SF3A3-206ENST00000487062 NREPQ16612 68 aa4.25□□□□□ -1.73
SF3A3-206ENST00000487062 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
SF3A3-206ENST00000487062 IGKV3D-7A0A0C4DH55 119 aa4.24□□□□□ -1.73
SF3A3-206ENST00000487062 CRYGAP11844 174 aa4.24□□□□□ -1.73
SF3A3-206ENST00000487062 COX7CP15954 63 aa4.24□□□□□ -1.73
SF3A3-206ENST00000487062 HIST1H4AP62805 103 aaKnown RBP4.24□□□□□ -1.73
SF3A3-206ENST00000487062 SMIM20Q8N5G0 67 aa4.23□□□□□ -1.73
SF3A3-206ENST00000487062 RPS28P62857 69 aaKnown RBP4.22□□□□□ -1.73
SF3A3-206ENST00000487062 CXCL6P80162 114 aa4.22□□□□□ -1.73
SF3A3-206ENST00000487062 MOBPQ13875 183 aa4.22□□□□□ -1.73
SF3A3-206ENST00000487062 FAM229BQ4G0N7 80 aa4.22□□□□□ -1.73
SF3A3-206ENST00000487062 RYR2Q92736 4967 aa4.21□□□□□ -1.74
SF3A3-206ENST00000487062 A0A0G2JQZ4 141 aa4.21□□□□□ -1.74
SF3A3-206ENST00000487062 J3KT08 172 aa4.21□□□□□ -1.74
SF3A3-206ENST00000487062 BPY2O14599 106 aa4.21□□□□□ -1.74
SF3A3-206ENST00000487062 SPINK6Q6UWN8 80 aa4.21□□□□□ -1.74
SF3A3-206ENST00000487062 SSBP3-AS1Q7Z2R9 100 aa4.21□□□□□ -1.74
SF3A3-206ENST00000487062 ANAPC11Q9NYG5 84 aa4.21□□□□□ -1.74
SF3A3-206ENST00000487062 SRRM2Q9UQ35 2752 aaKnown RBP4.2□□□□□ -1.74
SF3A3-206ENST00000487062 A0A087WSZ3 146 aa4.2□□□□□ -1.74
SF3A3-206ENST00000487062 SMR3BP02814 79 aaPredicted RBP4.2□□□□□ -1.74
SF3A3-206ENST00000487062 TMEM258P61165 79 aa4.2□□□□□ -1.74
SF3A3-206ENST00000487062 SERP2Q8N6R1 65 aa4.2□□□□□ -1.74
SF3A3-206ENST00000487062 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
SF3A3-206ENST00000487062 KRTAP4-5Q9BYR2 181 aa4.2□□□□□ -1.74
SF3A3-206ENST00000487062 CD164Q04900 197 aa4.18□□□□□ -1.74
SF3A3-206ENST00000487062 KRTAP9-8Q9BYQ0 159 aa4.18□□□□□ -1.74
SF3A3-206ENST00000487062 DYNC1H1Q14204 4646 aaKnown RBP4.17□□□□□ -1.74
SF3A3-206ENST00000487062 CDK2AP2O75956 126 aa4.17□□□□□ -1.74
SF3A3-206ENST00000487062 HRCT1Q6UXD1 115 aa4.17□□□□□ -1.74
SF3A3-206ENST00000487062 KRTAP1-4P0C5Y4 121 aa4.16□□□□□ -1.74
SF3A3-206ENST00000487062 LRP1BQ9NZR2 4599 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms