RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 C9orf153Q5TBE3 101 aa12.49□□□□□ -0.41
SREBF1-214ENST00000486311 ST20-AS1Q8NBB2 130 aa12.49□□□□□ -0.41
SREBF1-214ENST00000486311 VAMP3Q15836 100 aa12.48□□□□□ -0.41
SREBF1-214ENST00000486311 C6orf99Q4VX62 202 aa12.47□□□□□ -0.41
SREBF1-214ENST00000486311 TRBV7-6A0A0J9YX20 115 aa12.46□□□□□ -0.41
SREBF1-214ENST00000486311 KRTAP4-1Q9BYQ7 146 aa12.46□□□□□ -0.41
SREBF1-214ENST00000486311 SNHG12Q9BXW3 62 aa12.45□□□□□ -0.42
SREBF1-214ENST00000486311 COX7BP24311 80 aa12.43□□□□□ -0.42
SREBF1-214ENST00000486311 PSMB2P49721 201 aa12.43□□□□□ -0.42
SREBF1-214ENST00000486311 COX6CP09669 75 aa12.42□□□□□ -0.42
SREBF1-214ENST00000486311 SPRR1BP22528 89 aa12.42□□□□□ -0.42
SREBF1-214ENST00000486311 XP32Q5T750 250 aa12.42□□□□□ -0.42
SREBF1-214ENST00000486311 COL5A1-AS1Q5SY13 56 aa12.41□□□□□ -0.42
SREBF1-214ENST00000486311 ELOF1P60002 83 aaKnown RBP12.4□□□□□ -0.42
SREBF1-214ENST00000486311 DHRS4-AS1Q9P1J3 65 aa12.4□□□□□ -0.42
SREBF1-214ENST00000486311 H0YGX0 51 aa12.39□□□□□ -0.43
SREBF1-214ENST00000486311 LINC01547P58512 204 aaPredicted RBP12.38□□□□□ -0.43
SREBF1-214ENST00000486311 SNCGO76070 127 aa12.37□□□□□ -0.43
SREBF1-214ENST00000486311 TRIAP1O43715 76 aa12.36□□□□□ -0.43
SREBF1-214ENST00000486311 LYRM7Q5U5X0 104 aa12.36□□□□□ -0.43
SREBF1-214ENST00000486311 SCGB1C2P0DMR2 95 aa12.35□□□□□ -0.43
SREBF1-214ENST00000486311 LIMD2Q9BT23 127 aa12.34□□□□□ -0.43
SREBF1-214ENST00000486311 LAMTOR3Q9UHA4 124 aa12.34□□□□□ -0.43
SREBF1-214ENST00000486311 C9orf118A6NHY6 69 aa12.32□□□□□ -0.44
SREBF1-214ENST00000486311 TAX1BP3O14907 124 aa12.32□□□□□ -0.44
SREBF1-214ENST00000486311 H3BUT2 72 aa12.3□□□□□ -0.44
SREBF1-214ENST00000486311 HRCT1Q6UXD1 115 aa12.3□□□□□ -0.44
SREBF1-214ENST00000486311 LINC00575Q6W349 94 aa12.3□□□□□ -0.44
SREBF1-214ENST00000486311 A0A1B0GX51 115 aa12.29□□□□□ -0.44
SREBF1-214ENST00000486311 hADV29S1A0JD25 119 aa12.28□□□□□ -0.44
SREBF1-214ENST00000486311 NAA38Q9BRA0 125 aaKnown RBP12.28□□□□□ -0.44
SREBF1-214ENST00000486311 FABP2P12104 132 aa12.25□□□□□ -0.45
SREBF1-214ENST00000486311 CD164Q04900 197 aa12.25□□□□□ -0.45
SREBF1-214ENST00000486311 TEX49A0A1B0GTD5 131 aa12.24□□□□□ -0.45
SREBF1-214ENST00000486311 DEFB105AQ8NG35 78 aa12.24□□□□□ -0.45
SREBF1-214ENST00000486311 CLEC2BQ92478 149 aa12.24□□□□□ -0.45
SREBF1-214ENST00000486311 TRBV20-1A0A075B6N2 111 aa12.23□□□□□ -0.45
SREBF1-214ENST00000486311 A0A1W2PPM0 123 aa12.23□□□□□ -0.45
SREBF1-214ENST00000486311 LCE2DQ5TA82 110 aaPredicted RBP12.23□□□□□ -0.45
SREBF1-214ENST00000486311 DNAL4O96015 105 aa12.22□□□□□ -0.45
SREBF1-214ENST00000486311 GHRHP01286 108 aa12.22□□□□□ -0.45
SREBF1-214ENST00000486311 ATXN8Q156A1 80 aa12.21□□□□□ -0.45
SREBF1-214ENST00000486311 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.21□□□□□ -0.45
SREBF1-214ENST00000486311 FAM218AQ96MZ4 157 aa12.21□□□□□ -0.45
SREBF1-214ENST00000486311 C9orf92A6NGG3 77 aa12.2□□□□□ -0.46
SREBF1-214ENST00000486311 LST1O00453 97 aa12.2□□□□□ -0.46
SREBF1-214ENST00000486311 LCE2CQ5TA81 110 aa12.2□□□□□ -0.46
SREBF1-214ENST00000486311 SMIM29Q86T20 159 aa12.2□□□□□ -0.46
SREBF1-214ENST00000486311 TRACP01848 142 aa12.19□□□□□ -0.46
SREBF1-214ENST00000486311 OCIAD2Q56VL3 154 aa12.19□□□□□ -0.46
SREBF1-214ENST00000486311 PCOTHQ58A44 107 aa12.19□□□□□ -0.46
SREBF1-214ENST00000486311 IGLV5-48A0A075B6I7 105 aa12.18□□□□□ -0.46
SREBF1-214ENST00000486311 Q5XG85 94 aa12.18□□□□□ -0.46
SREBF1-214ENST00000486311 Q6ZQY7 126 aa12.17□□□□□ -0.46
SREBF1-214ENST00000486311 H3BQ85 93 aa12.16□□□□□ -0.46
SREBF1-214ENST00000486311 TCL1BO95988 128 aa12.16□□□□□ -0.46
SREBF1-214ENST00000486311 KRTAP19-2Q3LHN2 52 aa12.15□□□□□ -0.46
SREBF1-214ENST00000486311 IGLV8-61A0A075B6I0 122 aa12.14□□□□□ -0.47
SREBF1-214ENST00000486311 PPDPFLQ8WWR9 84 aa12.14□□□□□ -0.47
SREBF1-214ENST00000486311 SPCS1Q9Y6A9 102 aa12.14□□□□□ -0.47
SREBF1-214ENST00000486311 ORMDL1Q9P0S3 153 aa12.12□□□□□ -0.47
SREBF1-214ENST00000486311 C1orf195Q5TG92 126 aa12.11□□□□□ -0.47
SREBF1-214ENST00000486311 FSIP2Q5CZC0 6907 aa12.09□□□□□ -0.47
SREBF1-214ENST00000486311 A0A0G2JQZ4 141 aa12.09□□□□□ -0.47
SREBF1-214ENST00000486311 GTF2H5Q6ZYL4 71 aa12.09□□□□□ -0.47
SREBF1-214ENST00000486311 K7EP34 96 aa12.06□□□□□ -0.48
SREBF1-214ENST00000486311 TMEM256-PLSCR3K7ERE1 68 aa12.06□□□□□ -0.48
SREBF1-214ENST00000486311 MT1HP80294 61 aa12.06□□□□□ -0.48
SREBF1-214ENST00000486311 CRCT1Q9UGL9 99 aa12.06□□□□□ -0.48
SREBF1-214ENST00000486311 H3BMG7 143 aa12.04□□□□□ -0.48
SREBF1-214ENST00000486311 C9JAW5 83 aa12.03□□□□□ -0.48
SREBF1-214ENST00000486311 F8WEM9 126 aa12.03□□□□□ -0.48
SREBF1-214ENST00000486311 BAALC-AS2P0C853 105 aa12.02□□□□□ -0.49
SREBF1-214ENST00000486311 RPL37P61927 97 aaKnown RBP12□□□□□ -0.49
SREBF1-214ENST00000486311 UBE2V1Q13404 147 aa11.99□□□□□ -0.49
SREBF1-214ENST00000486311 H3BT86 120 aa11.98□□□□□ -0.49
SREBF1-214ENST00000486311 NDUFV3P56181 108 aaKnown RBP11.97□□□□□ -0.49
SREBF1-214ENST00000486311 ANKRD29Q8N6D5 301 aa11.94□□□□□ -0.5
SREBF1-214ENST00000486311 A0A1B0GV90 55 aa11.92□□□□□ -0.5
SREBF1-214ENST00000486311 Q6JHZ5 121 aa11.91□□□□□ -0.5
SREBF1-214ENST00000486311 MTURNQ8N3F0 131 aa11.9□□□□□ -0.5
SREBF1-214ENST00000486311 F8W1H4 67 aa11.89□□□□□ -0.51
SREBF1-214ENST00000486311 JMJD7-PLA2G4BH0Y9G9 81 aa11.89□□□□□ -0.51
SREBF1-214ENST00000486311 LORP23490 312 aaPredicted RBP11.87□□□□□ -0.51
SREBF1-214ENST00000486311 IGFL1Q6UW32 110 aa11.87□□□□□ -0.51
SREBF1-214ENST00000486311 TRBV7-7A0A0K0K1E9 115 aa11.86□□□□□ -0.51
SREBF1-214ENST00000486311 PRO0461Q9UI25 63 aa11.86□□□□□ -0.51
SREBF1-214ENST00000486311 KRTAP10-6P60371 365 aaPredicted RBP11.85□□□□□ -0.51
SREBF1-214ENST00000486311 RBM3P98179 157 aaKnown RBP11.85□□□□□ -0.51
SREBF1-214ENST00000486311 FLGP20930 4061 aaPredicted RBP11.83□□□□□ -0.52
SREBF1-214ENST00000486311 DSCR8Q96T75 97 aa11.83□□□□□ -0.52
SREBF1-214ENST00000486311 A0A1B0GV72 72 aa11.81□□□□□ -0.52
SREBF1-214ENST00000486311 SMCPP49901 116 aaPredicted RBP11.81□□□□□ -0.52
SREBF1-214ENST00000486311 COX6B2Q6YFQ2 88 aa11.81□□□□□ -0.52
SREBF1-214ENST00000486311 PDE6GP18545 87 aa11.79□□□□□ -0.52
SREBF1-214ENST00000486311 C21orf62-AS1Q17RA5 79 aa11.79□□□□□ -0.52
SREBF1-214ENST00000486311 M0R2T5 61 aa11.78□□□□□ -0.52
SREBF1-214ENST00000486311 OBSCN-AS1Q96MR7 158 aa11.78□□□□□ -0.52
SREBF1-214ENST00000486311 TRBV7-4A0A0J9YYF1 115 aa11.76□□□□□ -0.53
SREBF1-214ENST00000486311 TEN1Q86WV5 123 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms