RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 AKAP13Q12802 2813 aa5.45□□□□□ -1.54
GABRE-209ENST00000486255 USP9XQ93008 2570 aaPredicted RBP5.45□□□□□ -1.54
GABRE-209ENST00000486255 Q5W150 140 aa5.44□□□□□ -1.54
GABRE-209ENST00000486255 ANKRD17O75179 2603 aaKnown RBP5.44□□□□□ -1.54
GABRE-209ENST00000486255 TRIOO75962 3097 aa5.44□□□□□ -1.54
GABRE-209ENST00000486255 ASB16-AS1Q495Z4 193 aa5.43□□□□□ -1.54
GABRE-209ENST00000486255 OXTP01178 125 aa5.43□□□□□ -1.54
GABRE-209ENST00000486255 CR1P17927 2039 aa5.43□□□□□ -1.54
GABRE-209ENST00000486255 RPL37P61927 97 aaKnown RBP5.42□□□□□ -1.54
GABRE-209ENST00000486255 SETD2Q9BYW2 2564 aaPredicted RBP5.42□□□□□ -1.54
GABRE-209ENST00000486255 H1FX-AS1Q4G0G2 97 aa5.42□□□□□ -1.54
GABRE-209ENST00000486255 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.42□□□□□ -1.54
GABRE-209ENST00000486255 R4GN34 69 aa5.38□□□□□ -1.55
GABRE-209ENST00000486255 USP9YO00507 2555 aaPredicted RBP5.38□□□□□ -1.55
GABRE-209ENST00000486255 DNAH14Q0VDD8 3507 aa5.38□□□□□ -1.55
GABRE-209ENST00000486255 LAMA1P25391 3075 aa5.36□□□□□ -1.55
GABRE-209ENST00000486255 LINC00472Q9H8W2 130 aa5.34□□□□□ -1.55
GABRE-209ENST00000486255 TNP2Q05952 138 aa5.33□□□□□ -1.56
GABRE-209ENST00000486255 PRRC2CQ9Y520 2896 aaKnown RBP5.33□□□□□ -1.56
GABRE-209ENST00000486255 LCE6AA0A183 80 aa5.32□□□□□ -1.56
GABRE-209ENST00000486255 MGAQ8IWI9 3026 aa5.31□□□□□ -1.56
GABRE-209ENST00000486255 Q5VSD8 79 aa5.31□□□□□ -1.56
GABRE-209ENST00000486255 SPATA8Q6RVD6 105 aa5.31□□□□□ -1.56
GABRE-209ENST00000486255 M0QZ58 72 aa5.31□□□□□ -1.56
GABRE-209ENST00000486255 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
GABRE-209ENST00000486255 KRTAP26-1Q6PEX3 210 aa5.31□□□□□ -1.56
GABRE-209ENST00000486255 USP24Q9UPU5 2620 aa5.31□□□□□ -1.56
GABRE-209ENST00000486255 VCANP13611 3396 aa5.3□□□□□ -1.56
GABRE-209ENST00000486255 Q8NDZ9 215 aa5.3□□□□□ -1.56
GABRE-209ENST00000486255 PLAC4Q8WY50 150 aa5.3□□□□□ -1.56
GABRE-209ENST00000486255 ACANP16112 2415 aa5.29□□□□□ -1.56
GABRE-209ENST00000486255 COL6A3P12111 3177 aa5.29□□□□□ -1.56
GABRE-209ENST00000486255 SPRR1AP35321 89 aa5.29□□□□□ -1.56
GABRE-209ENST00000486255 MTORP42345 2549 aa5.29□□□□□ -1.56
GABRE-209ENST00000486255 EPG5Q9HCE0 2579 aa5.29□□□□□ -1.56
GABRE-209ENST00000486255 POLQO75417 2590 aa5.29□□□□□ -1.56
GABRE-209ENST00000486255 EYSQ5T1H1 3165 aa5.29□□□□□ -1.56
GABRE-209ENST00000486255 A6NN06 94 aa5.28□□□□□ -1.56
GABRE-209ENST00000486255 ADM2Q7Z4H4 148 aa5.28□□□□□ -1.56
GABRE-209ENST00000486255 PLAC8Q9NZF1 115 aa5.28□□□□□ -1.56
GABRE-209ENST00000486255 SPRR1BP22528 89 aa5.26□□□□□ -1.57
GABRE-209ENST00000486255 Q6ZR54 194 aa5.25□□□□□ -1.57
GABRE-209ENST00000486255 C20orf166-AS1Q96NR2 134 aa5.25□□□□□ -1.57
GABRE-209ENST00000486255 USP34Q70CQ2 3546 aa5.25□□□□□ -1.57
GABRE-209ENST00000486255 IGSF10Q6WRI0 2623 aa5.25□□□□□ -1.57
GABRE-209ENST00000486255 A0A0C4DFX4 3053 aa5.24□□□□□ -1.57
GABRE-209ENST00000486255 WDFY4Q6ZS81 3184 aa5.23□□□□□ -1.57
GABRE-209ENST00000486255 NDUFAF8A1L188 74 aa5.22□□□□□ -1.57
GABRE-209ENST00000486255 FASNP49327 2511 aaKnown RBP5.22□□□□□ -1.57
GABRE-209ENST00000486255 VPS13AQ96RL7 3174 aa5.2□□□□□ -1.58
GABRE-209ENST00000486255 SEC61BP60468 96 aaKnown RBP5.19□□□□□ -1.58
GABRE-209ENST00000486255 DSPP15924 2871 aaKnown RBP5.17□□□□□ -1.58
GABRE-209ENST00000486255 FLNAP21333 2647 aaKnown RBP5.17□□□□□ -1.58
GABRE-209ENST00000486255 PANO1I0J062 215 aa5.16□□□□□ -1.58
GABRE-209ENST00000486255 KRTAP29-1A8MX34 341 aaPredicted RBP5.16□□□□□ -1.58
GABRE-209ENST00000486255 A8MU10 97 aa5.15□□□□□ -1.58
GABRE-209ENST00000486255 DMXL1Q9Y485 3027 aa5.15□□□□□ -1.59
GABRE-209ENST00000486255 ITPR3Q14573 2671 aa5.14□□□□□ -1.59
GABRE-209ENST00000486255 CFAP54Q96N23 3096 aa5.13□□□□□ -1.59
GABRE-209ENST00000486255 FRYLO94915 3013 aa5.12□□□□□ -1.59
GABRE-209ENST00000486255 MYO15AQ9UKN7 3530 aa5.12□□□□□ -1.59
GABRE-209ENST00000486255 HECTD1Q9ULT8 2610 aa5.12□□□□□ -1.59
GABRE-209ENST00000486255 FREM2Q5SZK8 3169 aa5.11□□□□□ -1.59
GABRE-209ENST00000486255 DMXL2Q8TDJ6 3036 aa5.11□□□□□ -1.59
GABRE-209ENST00000486255 KRTAP21-3Q3LHN1 58 aa5.1□□□□□ -1.59
GABRE-209ENST00000486255 UBR5O95071 2799 aaPredicted RBP5.1□□□□□ -1.59
GABRE-209ENST00000486255 HELZ2Q9BYK8 2649 aaKnown RBP5.1□□□□□ -1.59
GABRE-209ENST00000486255 FRYQ5TBA9 3013 aa5.1□□□□□ -1.59
GABRE-209ENST00000486255 C10orf95Q9H7T3 257 aa5.07□□□□□ -1.6
GABRE-209ENST00000486255 CELSR3Q9NYQ7 3312 aa5.06□□□□□ -1.6
GABRE-209ENST00000486255 CFAP46Q8IYW2 2715 aa5.06□□□□□ -1.6
GABRE-209ENST00000486255 UNC79Q9P2D8 2635 aa5.06□□□□□ -1.6
GABRE-209ENST00000486255 MGAM2Q2M2H8 2515 aa5.05□□□□□ -1.6
GABRE-209ENST00000486255 DMDP11532 3685 aa5.05□□□□□ -1.6
GABRE-209ENST00000486255 SPEGQ15772 3267 aa5.05□□□□□ -1.6
GABRE-209ENST00000486255 WDFY3Q8IZQ1 3526 aa5.05□□□□□ -1.6
GABRE-209ENST00000486255 HRNRQ86YZ3 2850 aaPredicted RBP5.05□□□□□ -1.6
GABRE-209ENST00000486255 A8MUU9 505 aa5.04□□□□□ -1.6
GABRE-209ENST00000486255 BOD1L1Q8NFC6 3051 aa5.04□□□□□ -1.6
GABRE-209ENST00000486255 KRTAP4-16G5E9R7 235 aaPredicted RBP5.04□□□□□ -1.6
GABRE-209ENST00000486255 A0A087X002 238 aa5.04□□□□□ -1.6
GABRE-209ENST00000486255 NOTCH2NLQ7Z3S9 236 aa5.04□□□□□ -1.6
GABRE-209ENST00000486255 ITPR1Q14643 2758 aa5.03□□□□□ -1.6
GABRE-209ENST00000486255 KRTAP10-1P60331 282 aa5.01□□□□□ -1.61
GABRE-209ENST00000486255 KRTAP1-5Q9BYS1 174 aa5.01□□□□□ -1.61
GABRE-209ENST00000486255 FLNBO75369 2602 aaKnown RBP5.01□□□□□ -1.61
GABRE-209ENST00000486255 ATMQ13315 3056 aa5.01□□□□□ -1.61
GABRE-209ENST00000486255 ADGRG4Q8IZF6 3080 aa5□□□□□ -1.61
GABRE-209ENST00000486255 LRBAP50851 2863 aa5□□□□□ -1.61
GABRE-209ENST00000486255 KRTAP10-2P60368 255 aa4.99□□□□□ -1.61
GABRE-209ENST00000486255 FLNCQ14315 2725 aa4.99□□□□□ -1.61
GABRE-209ENST00000486255 LOC400499M0QZD8 3231 aa4.98□□□□□ -1.61
GABRE-209ENST00000486255 KRTAP11-1Q8IUC1 163 aa4.98□□□□□ -1.61
GABRE-209ENST00000486255 TNP1P09430 55 aa4.97□□□□□ -1.61
GABRE-209ENST00000486255 UTP20O75691 2785 aaKnown RBP4.96□□□□□ -1.62
GABRE-209ENST00000486255 TEX15Q9BXT5 2789 aa4.96□□□□□ -1.62
GABRE-209ENST00000486255 APCP25054 2843 aa4.94□□□□□ -1.62
GABRE-209ENST00000486255 BSNQ9UPA5 3926 aa4.93□□□□□ -1.62
GABRE-209ENST00000486255 CENPEQ02224 2701 aa4.93□□□□□ -1.62
GABRE-209ENST00000486255 CHD6Q8TD26 2715 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms