RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 H7C2G1 150 aa8.43□□□□□ -1.06
HLA-DQB1-208ENST00000484729 LORP23490 312 aaPredicted RBP8.43□□□□□ -1.06
HLA-DQB1-208ENST00000484729 FXYD2P54710 66 aa8.43□□□□□ -1.06
HLA-DQB1-208ENST00000484729 ELOF1P60002 83 aaKnown RBP8.43□□□□□ -1.06
HLA-DQB1-208ENST00000484729 A0A1B0GWB2 263 aa8.42□□□□□ -1.06
HLA-DQB1-208ENST00000484729 TSTD3H0UI37 97 aa8.42□□□□□ -1.06
HLA-DQB1-208ENST00000484729 CFC1P0CG37 223 aa8.42□□□□□ -1.06
HLA-DQB1-208ENST00000484729 HRCT1Q6UXD1 115 aa8.42□□□□□ -1.06
HLA-DQB1-208ENST00000484729 LIMD2Q9BT23 127 aa8.42□□□□□ -1.06
HLA-DQB1-208ENST00000484729 TRBV7-6A0A0J9YX20 115 aa8.41□□□□□ -1.06
HLA-DQB1-208ENST00000484729 KRTAP10-6P60371 365 aaPredicted RBP8.41□□□□□ -1.06
HLA-DQB1-208ENST00000484729 DHRS4-AS1Q9P1J3 65 aa8.41□□□□□ -1.06
HLA-DQB1-208ENST00000484729 SPRR1BP22528 89 aa8.4□□□□□ -1.06
HLA-DQB1-208ENST00000484729 Q1RN00 199 aa8.4□□□□□ -1.06
HLA-DQB1-208ENST00000484729 NHP2Q9NX24 153 aaKnown RBP8.4□□□□□ -1.06
HLA-DQB1-208ENST00000484729 LAMTOR3Q9UHA4 124 aa8.4□□□□□ -1.06
HLA-DQB1-208ENST00000484729 VAMP3Q15836 100 aa8.39□□□□□ -1.07
HLA-DQB1-208ENST00000484729 PRO1854Q9UHT4 67 aa8.38□□□□□ -1.07
HLA-DQB1-208ENST00000484729 KRTAP9-7A8MTY7 169 aa8.36□□□□□ -1.07
HLA-DQB1-208ENST00000484729 K7ERJ3 54 aa8.36□□□□□ -1.07
HLA-DQB1-208ENST00000484729 BVES-AS1Q5T3Y7 98 aa8.36□□□□□ -1.07
HLA-DQB1-208ENST00000484729 C9orf92A6NGG3 77 aa8.35□□□□□ -1.07
HLA-DQB1-208ENST00000484729 M0R143 59 aa8.35□□□□□ -1.07
HLA-DQB1-208ENST00000484729 DEFB105AQ8NG35 78 aa8.35□□□□□ -1.07
HLA-DQB1-208ENST00000484729 PCOTHQ58A44 107 aa8.34□□□□□ -1.07
HLA-DQB1-208ENST00000484729 IGLV8-61A0A075B6I0 122 aa8.33□□□□□ -1.08
HLA-DQB1-208ENST00000484729 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.32□□□□□ -1.08
HLA-DQB1-208ENST00000484729 M0R2T5 61 aa8.31□□□□□ -1.08
HLA-DQB1-208ENST00000484729 LINC00575Q6W349 94 aa8.31□□□□□ -1.08
HLA-DQB1-208ENST00000484729 TEX49A0A1B0GTD5 131 aa8.3□□□□□ -1.08
HLA-DQB1-208ENST00000484729 PSMB2P49721 201 aa8.3□□□□□ -1.08
HLA-DQB1-208ENST00000484729 CD164Q04900 197 aa8.3□□□□□ -1.08
HLA-DQB1-208ENST00000484729 hADV29S1A0JD25 119 aa8.29□□□□□ -1.08
HLA-DQB1-208ENST00000484729 H0YGX0 51 aa8.28□□□□□ -1.08
HLA-DQB1-208ENST00000484729 TRIAP1O43715 76 aa8.28□□□□□ -1.08
HLA-DQB1-208ENST00000484729 SNCGO76070 127 aa8.28□□□□□ -1.08
HLA-DQB1-208ENST00000484729 BATFQ16520 125 aa8.27□□□□□ -1.09
HLA-DQB1-208ENST00000484729 Q6ZQY7 126 aa8.26□□□□□ -1.09
HLA-DQB1-208ENST00000484729 COX6CP09669 75 aa8.25□□□□□ -1.09
HLA-DQB1-208ENST00000484729 SMIM29Q86T20 159 aa8.25□□□□□ -1.09
HLA-DQB1-208ENST00000484729 IGLV5-48A0A075B6I7 105 aa8.24□□□□□ -1.09
HLA-DQB1-208ENST00000484729 A0A0G2JQZ4 141 aa8.24□□□□□ -1.09
HLA-DQB1-208ENST00000484729 C1orf195Q5TG92 126 aa8.23□□□□□ -1.09
HLA-DQB1-208ENST00000484729 Q5XG85 94 aa8.23□□□□□ -1.09
HLA-DQB1-208ENST00000484729 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.23□□□□□ -1.09
HLA-DQB1-208ENST00000484729 CLEC2BQ92478 149 aa8.23□□□□□ -1.09
HLA-DQB1-208ENST00000484729 FAM218AQ96MZ4 157 aa8.23□□□□□ -1.09
HLA-DQB1-208ENST00000484729 A0A1B0GX51 115 aa8.2□□□□□ -1.1
HLA-DQB1-208ENST00000484729 F8WEM9 126 aa8.2□□□□□ -1.1
HLA-DQB1-208ENST00000484729 SCGB1C2P0DMR2 95 aa8.2□□□□□ -1.1
HLA-DQB1-208ENST00000484729 DNAL4O96015 105 aa8.19□□□□□ -1.1
HLA-DQB1-208ENST00000484729 COX6B2Q6YFQ2 88 aa8.18□□□□□ -1.1
HLA-DQB1-208ENST00000484729 NAA38Q9BRA0 125 aaKnown RBP8.18□□□□□ -1.1
HLA-DQB1-208ENST00000484729 RPL37P61927 97 aaKnown RBP8.17□□□□□ -1.1
HLA-DQB1-208ENST00000484729 OCIAD2Q56VL3 154 aa8.17□□□□□ -1.1
HLA-DQB1-208ENST00000484729 PPDPFLQ8WWR9 84 aa8.17□□□□□ -1.1
HLA-DQB1-208ENST00000484729 TCL1BO95988 128 aa8.16□□□□□ -1.1
HLA-DQB1-208ENST00000484729 FLGP20930 4061 aaPredicted RBP8.15□□□□□ -1.1
HLA-DQB1-208ENST00000484729 GHRHP01286 108 aa8.15□□□□□ -1.1
HLA-DQB1-208ENST00000484729 SNHG12Q9BXW3 62 aa8.15□□□□□ -1.1
HLA-DQB1-208ENST00000484729 LYRM7Q5U5X0 104 aa8.14□□□□□ -1.11
HLA-DQB1-208ENST00000484729 PCP4L1A6NKN8 68 aa8.13□□□□□ -1.11
HLA-DQB1-208ENST00000484729 ORMDL1Q9P0S3 153 aa8.13□□□□□ -1.11
HLA-DQB1-208ENST00000484729 LST1O00453 97 aa8.12□□□□□ -1.11
HLA-DQB1-208ENST00000484729 FABP2P12104 132 aa8.12□□□□□ -1.11
HLA-DQB1-208ENST00000484729 H3BUT2 72 aa8.11□□□□□ -1.11
HLA-DQB1-208ENST00000484729 TRACP01848 142 aa8.11□□□□□ -1.11
HLA-DQB1-208ENST00000484729 ATXN8Q156A1 80 aa8.1□□□□□ -1.11
HLA-DQB1-208ENST00000484729 H3BQ85 93 aa8.09□□□□□ -1.11
HLA-DQB1-208ENST00000484729 SSPOA2VEC9 5147 aa8.09□□□□□ -1.12
HLA-DQB1-208ENST00000484729 C9orf118A6NHY6 69 aa8.08□□□□□ -1.12
HLA-DQB1-208ENST00000484729 TAX1BP3O14907 124 aa8.08□□□□□ -1.12
HLA-DQB1-208ENST00000484729 NDUFV3P56181 108 aaKnown RBP8.08□□□□□ -1.12
HLA-DQB1-208ENST00000484729 Q6JHZ5 121 aa8.08□□□□□ -1.12
HLA-DQB1-208ENST00000484729 USH2AO75445 5202 aa8.06□□□□□ -1.12
HLA-DQB1-208ENST00000484729 TRBV7-7A0A0K0K1E9 115 aa8.06□□□□□ -1.12
HLA-DQB1-208ENST00000484729 TMEM256-PLSCR3K7ERE1 68 aa8.06□□□□□ -1.12
HLA-DQB1-208ENST00000484729 COL5A1-AS1Q5SY13 56 aa8.06□□□□□ -1.12
HLA-DQB1-208ENST00000484729 IGFL1Q6UW32 110 aa8.06□□□□□ -1.12
HLA-DQB1-208ENST00000484729 A0A1B0GV72 72 aa8.05□□□□□ -1.12
HLA-DQB1-208ENST00000484729 A0A1W2PPM0 123 aa8.05□□□□□ -1.12
HLA-DQB1-208ENST00000484729 TRBV20-1A0A075B6N2 111 aa8.04□□□□□ -1.12
HLA-DQB1-208ENST00000484729 H3BMG7 143 aa8.04□□□□□ -1.12
HLA-DQB1-208ENST00000484729 OBSCN-AS1Q96MR7 158 aa8.02□□□□□ -1.13
HLA-DQB1-208ENST00000484729 BAALC-AS2P0C853 105 aa8.01□□□□□ -1.13
HLA-DQB1-208ENST00000484729 UBE2V1Q13404 147 aa8.01□□□□□ -1.13
HLA-DQB1-208ENST00000484729 FCGBPQ9Y6R7 5405 aaPredicted RBP8□□□□□ -1.13
HLA-DQB1-208ENST00000484729 Q6Q795 121 aa8□□□□□ -1.13
HLA-DQB1-208ENST00000484729 ATP11AUNQ6ZP68 121 aa8□□□□□ -1.13
HLA-DQB1-208ENST00000484729 C9JAW5 83 aa7.99□□□□□ -1.13
HLA-DQB1-208ENST00000484729 ANKRD29Q8N6D5 301 aa7.99□□□□□ -1.13
HLA-DQB1-208ENST00000484729 Q75L30 129 aa7.98□□□□□ -1.13
HLA-DQB1-208ENST00000484729 SPCS1Q9Y6A9 102 aa7.97□□□□□ -1.13
HLA-DQB1-208ENST00000484729 KRTAP9-8Q9BYQ0 159 aa7.96□□□□□ -1.14
HLA-DQB1-208ENST00000484729 TEN1Q86WV5 123 aa7.94□□□□□ -1.14
HLA-DQB1-208ENST00000484729 RBM3P98179 157 aaKnown RBP7.93□□□□□ -1.14
HLA-DQB1-208ENST00000484729 MTURNQ8N3F0 131 aa7.93□□□□□ -1.14
HLA-DQB1-208ENST00000484729 Q96NJ1 140 aa7.93□□□□□ -1.14
HLA-DQB1-208ENST00000484729 DSCR8Q96T75 97 aa7.93□□□□□ -1.14
HLA-DQB1-208ENST00000484729 KRTAP19-1Q8IUB9 90 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms