RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 ATOX1O00244 68 aa16.2■□□□□ 0.18
SHOX2-204ENST00000483851 DNAH11Q96DT5 4516 aa16.17■□□□□ 0.18
SHOX2-204ENST00000483851 PSORS1C2Q9UIG4 136 aa16.16■□□□□ 0.18
SHOX2-204ENST00000483851 SACSQ9NZJ4 4579 aa16.15■□□□□ 0.18
SHOX2-204ENST00000483851 KRTAP10-1P60331 282 aa16.15■□□□□ 0.18
SHOX2-204ENST00000483851 FAM30AQ9NZY2 134 aa16.15■□□□□ 0.18
SHOX2-204ENST00000483851 FAT2Q9NYQ8 4349 aa16.15■□□□□ 0.18
SHOX2-204ENST00000483851 SPRR1BP22528 89 aa16.14■□□□□ 0.17
SHOX2-204ENST00000483851 C3orf22Q8N5N4 141 aa16.14■□□□□ 0.17
SHOX2-204ENST00000483851 CIRBP-AS1Q8TBR5 109 aa16.14■□□□□ 0.17
SHOX2-204ENST00000483851 UQCRQO14949 82 aa16.12■□□□□ 0.17
SHOX2-204ENST00000483851 COX7CP15954 63 aa16.12■□□□□ 0.17
SHOX2-204ENST00000483851 CXCL6P80162 114 aa16.11■□□□□ 0.17
SHOX2-204ENST00000483851 SMIM29Q86T20 159 aa16.1■□□□□ 0.17
SHOX2-204ENST00000483851 DNAH5Q8TE73 4624 aa16.08■□□□□ 0.17
SHOX2-204ENST00000483851 C1orf137Q5JT78 98 aa16.08■□□□□ 0.17
SHOX2-204ENST00000483851 SCXQ7RTU7 201 aa16.08■□□□□ 0.17
SHOX2-204ENST00000483851 PKD1P98161 4303 aa16.08■□□□□ 0.16
SHOX2-204ENST00000483851 HAMPP81172 84 aa16.08■□□□□ 0.16
SHOX2-204ENST00000483851 F8WEM9 126 aa16.07■□□□□ 0.16
SHOX2-204ENST00000483851 ZNF861PO60384 105 aa16.05■□□□□ 0.16
SHOX2-204ENST00000483851 SERP2Q8N6R1 65 aa16.03■□□□□ 0.16
SHOX2-204ENST00000483851 IGLV8-61A0A075B6I0 122 aa16.03■□□□□ 0.16
SHOX2-204ENST00000483851 A0A1B0GW54 56 aa16.03■□□□□ 0.16
SHOX2-204ENST00000483851 DNAH8Q96JB1 4490 aa16.02■□□□□ 0.16
SHOX2-204ENST00000483851 ZNF706Q9Y5V0 76 aaPredicted RBP16.02■□□□□ 0.16
SHOX2-204ENST00000483851 C9orf153Q5TBE3 101 aa16■□□□□ 0.15
SHOX2-204ENST00000483851 A0A1B0GVY2 172 aa15.99■□□□□ 0.15
SHOX2-204ENST00000483851 SS18L2Q9UHA2 77 aa15.99■□□□□ 0.15
SHOX2-204ENST00000483851 IGLV7-43P04211 117 aa15.99■□□□□ 0.15
SHOX2-204ENST00000483851 CRYGAP11844 174 aa15.98■□□□□ 0.15
SHOX2-204ENST00000483851 A0A1W2PNM2 257 aa15.97■□□□□ 0.15
SHOX2-204ENST00000483851 SPRR4Q96PI1 79 aa15.97■□□□□ 0.15
SHOX2-204ENST00000483851 LINC00483Q53H64 154 aa15.95■□□□□ 0.14
SHOX2-204ENST00000483851 Q8NBF4 154 aa15.93■□□□□ 0.14
SHOX2-204ENST00000483851 NREPQ16612 68 aa15.91■□□□□ 0.14
SHOX2-204ENST00000483851 IGFL1Q6UW32 110 aa15.88■□□□□ 0.13
SHOX2-204ENST00000483851 RYR2Q92736 4967 aa15.85■□□□□ 0.13
SHOX2-204ENST00000483851 RPL37AP61513 92 aaKnown RBP15.84■□□□□ 0.13
SHOX2-204ENST00000483851 KMT2CQ8NEZ4 4911 aaKnown RBP15.83■□□□□ 0.13
SHOX2-204ENST00000483851 IGKV4-1P06312 121 aa15.82■□□□□ 0.12
SHOX2-204ENST00000483851 CYSTM1Q9H1C7 97 aa15.82■□□□□ 0.12
SHOX2-204ENST00000483851 SRRM2Q9UQ35 2752 aaKnown RBP15.82■□□□□ 0.12
SHOX2-204ENST00000483851 TRAV7A0A075B6U4 112 aa15.8■□□□□ 0.12
SHOX2-204ENST00000483851 BPY2O14599 106 aa15.8■□□□□ 0.12
SHOX2-204ENST00000483851 SMIM20Q8N5G0 67 aa15.79■□□□□ 0.12
SHOX2-204ENST00000483851 Q8N9L7 120 aa15.77■□□□□ 0.11
SHOX2-204ENST00000483851 IGLV9-49A0A0B4J1Y8 123 aa15.71■□□□□ 0.11
SHOX2-204ENST00000483851 A0A0G2JQZ4 141 aa15.7■□□□□ 0.1
SHOX2-204ENST00000483851 PKHD1P08F94 4074 aa15.68■□□□□ 0.1
SHOX2-204ENST00000483851 LRP1BQ9NZR2 4599 aa15.68■□□□□ 0.1
SHOX2-204ENST00000483851 DSCR10P59022 87 aa15.65■□□□□ 0.1
SHOX2-204ENST00000483851 C20orf197Q8N268 126 aa15.64■□□□□ 0.09
SHOX2-204ENST00000483851 MOBPQ13875 183 aa15.63■□□□□ 0.09
SHOX2-204ENST00000483851 FAM229BQ4G0N7 80 aa15.63■□□□□ 0.09
SHOX2-204ENST00000483851 ANAPC11Q9NYG5 84 aa15.63■□□□□ 0.09
SHOX2-204ENST00000483851 A0A087WSZ3 146 aa15.63■□□□□ 0.09
SHOX2-204ENST00000483851 TMEM258P61165 79 aa15.63■□□□□ 0.09
SHOX2-204ENST00000483851 RYR3Q15413 4870 aa15.61■□□□□ 0.09
SHOX2-204ENST00000483851 DYNC1H1Q14204 4646 aaKnown RBP15.61■□□□□ 0.09
SHOX2-204ENST00000483851 SSBP3-AS1Q7Z2R9 100 aa15.59■□□□□ 0.09
SHOX2-204ENST00000483851 KLKP1Q107X0 134 aa15.59■□□□□ 0.09
SHOX2-204ENST00000483851 SPINK6Q6UWN8 80 aa15.58■□□□□ 0.08
SHOX2-204ENST00000483851 OCR1Q9BZK8 76 aa15.58■□□□□ 0.08
SHOX2-204ENST00000483851 K7EQZ3 153 aa15.53■□□□□ 0.08
SHOX2-204ENST00000483851 KRTAP1-4P0C5Y4 121 aa15.51■□□□□ 0.07
SHOX2-204ENST00000483851 CD164Q04900 197 aa15.51■□□□□ 0.07
SHOX2-204ENST00000483851 SMR3BP02814 79 aaPredicted RBP15.5■□□□□ 0.07
SHOX2-204ENST00000483851 H7BZZ5 65 aa15.49■□□□□ 0.07
SHOX2-204ENST00000483851 VPS13BQ7Z7G8 4022 aa15.49■□□□□ 0.07
SHOX2-204ENST00000483851 RPS28P62857 69 aaKnown RBP15.46■□□□□ 0.07
SHOX2-204ENST00000483851 SNURFQ9Y675 71 aa15.46■□□□□ 0.06
SHOX2-204ENST00000483851 A0A087X002 238 aa15.45■□□□□ 0.06
SHOX2-204ENST00000483851 LINC00472Q9H8W2 130 aa15.45■□□□□ 0.06
SHOX2-204ENST00000483851 APOBP04114 4563 aaKnown RBP15.44■□□□□ 0.06
SHOX2-204ENST00000483851 KRTAP10-4P60372 401 aaPredicted RBP15.43■□□□□ 0.06
SHOX2-204ENST00000483851 KRTAP13-2Q52LG2 175 aa15.43■□□□□ 0.06
SHOX2-204ENST00000483851 DEFB116Q30KQ4 102 aa15.42■□□□□ 0.06
SHOX2-204ENST00000483851 TMEM254Q8TBM7 123 aa15.42■□□□□ 0.06
SHOX2-204ENST00000483851 J3KT08 172 aa15.41■□□□□ 0.06
SHOX2-204ENST00000483851 CDK2AP2O75956 126 aa15.41■□□□□ 0.06
SHOX2-204ENST00000483851 PLA2G1BP04054 148 aaKnown RBP15.41■□□□□ 0.06
SHOX2-204ENST00000483851 HRCT1Q6UXD1 115 aa15.41■□□□□ 0.06
SHOX2-204ENST00000483851 HCG22E2RYF7 251 aa15.38■□□□□ 0.05
SHOX2-204ENST00000483851 A0A0U1RQV1 116 aa15.37■□□□□ 0.05
SHOX2-204ENST00000483851 NDUFC1O43677 76 aa15.37■□□□□ 0.05
SHOX2-204ENST00000483851 FAM236DA0A1B0GTK5 79 aa15.33■□□□□ 0.04
SHOX2-204ENST00000483851 FAM236CP0DP71 79 aa15.33■□□□□ 0.04
SHOX2-204ENST00000483851 FAM229AH3BQW9 127 aa15.32■□□□□ 0.04
SHOX2-204ENST00000483851 Q96NJ1 140 aa15.32■□□□□ 0.04
SHOX2-204ENST00000483851 A8MWP4 228 aa15.3■□□□□ 0.04
SHOX2-204ENST00000483851 ASB16-AS1Q495Z4 193 aa15.3■□□□□ 0.04
SHOX2-204ENST00000483851 PRR15Q8IV56 129 aa15.3■□□□□ 0.04
SHOX2-204ENST00000483851 KRTAP29-1A8MX34 341 aaPredicted RBP15.29■□□□□ 0.04
SHOX2-204ENST00000483851 Q5XG85 94 aa15.29■□□□□ 0.04
SHOX2-204ENST00000483851 TYMSOSQ8TAI1 123 aa15.28■□□□□ 0.04
SHOX2-204ENST00000483851 OXTP01178 125 aa15.27■□□□□ 0.03
SHOX2-204ENST00000483851 NDUFB1O75438 58 aa15.24■□□□□ 0.03
SHOX2-204ENST00000483851 WFDC13Q8IUB5 93 aa15.21■□□□□ 0.03
SHOX2-204ENST00000483851 C4orf48Q5BLP8 95 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms