RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 GNG13Q9P2W3 67 aa3.91□□□□□ -1.78
CLK1-212ENST00000482590 TNXBP22105 4242 aa3.9□□□□□ -1.78
CLK1-212ENST00000482590 TRAV7A0A075B6U4 112 aa3.9□□□□□ -1.79
CLK1-212ENST00000482590 IGKV2-24A0A0C4DH68 120 aa3.9□□□□□ -1.79
CLK1-212ENST00000482590 F2Z2F3 143 aa3.9□□□□□ -1.79
CLK1-212ENST00000482590 MT1HL1P0DM35 61 aa3.9□□□□□ -1.79
CLK1-212ENST00000482590 FXYD2P54710 66 aa3.9□□□□□ -1.79
CLK1-212ENST00000482590 CHCHD1Q96BP2 118 aaKnown RBP3.9□□□□□ -1.79
CLK1-212ENST00000482590 LINC00526Q96FQ7 95 aa3.9□□□□□ -1.79
CLK1-212ENST00000482590 SERP1Q9Y6X1 66 aa3.9□□□□□ -1.79
CLK1-212ENST00000482590 HMSDA8MTL9 139 aa3.89□□□□□ -1.79
CLK1-212ENST00000482590 COX6A2Q02221 97 aa3.89□□□□□ -1.79
CLK1-212ENST00000482590 LYZL1Q6UWQ5 148 aa3.89□□□□□ -1.79
CLK1-212ENST00000482590 SVBPQ8N300 66 aa3.89□□□□□ -1.79
CLK1-212ENST00000482590 MED9Q9NWA0 146 aa3.89□□□□□ -1.79
CLK1-212ENST00000482590 PLAC8Q9NZF1 115 aa3.89□□□□□ -1.79
CLK1-212ENST00000482590 TRBV10-2A0A0K0K1G8 114 aa3.88□□□□□ -1.79
CLK1-212ENST00000482590 CRYGAP11844 174 aa3.88□□□□□ -1.79
CLK1-212ENST00000482590 SS18Q15532 418 aa3.88□□□□□ -1.79
CLK1-212ENST00000482590 ASB16-AS1Q495Z4 193 aa3.88□□□□□ -1.79
CLK1-212ENST00000482590 C9orf153Q5TBE3 101 aa3.88□□□□□ -1.79
CLK1-212ENST00000482590 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.87□□□□□ -1.79
CLK1-212ENST00000482590 GVQW2A0A096LPI5 108 aaPredicted RBP3.87□□□□□ -1.79
CLK1-212ENST00000482590 IGKV2-29A2NJV5 120 aaPredicted RBP3.87□□□□□ -1.79
CLK1-212ENST00000482590 ZNF22P17026 224 aaPredicted RBP3.87□□□□□ -1.79
CLK1-212ENST00000482590 CLEC2BQ92478 149 aa3.87□□□□□ -1.79
CLK1-212ENST00000482590 RETNLBQ9BQ08 111 aa3.87□□□□□ -1.79
CLK1-212ENST00000482590 LINC00474Q9P2X8 69 aa3.87□□□□□ -1.79
CLK1-212ENST00000482590 IGLV4-69A0A075B6H9 119 aa3.86□□□□□ -1.79
CLK1-212ENST00000482590 A0A096LNI7 61 aa3.86□□□□□ -1.79
CLK1-212ENST00000482590 TRAV1-1A0A0B4J248 108 aa3.86□□□□□ -1.79
CLK1-212ENST00000482590 A0A1B0GU33 70 aa3.86□□□□□ -1.79
CLK1-212ENST00000482590 SDHAF1A6NFY7 115 aa3.86□□□□□ -1.79
CLK1-212ENST00000482590 A6NN06 94 aa3.86□□□□□ -1.79
CLK1-212ENST00000482590 H7C2G1 150 aa3.86□□□□□ -1.79
CLK1-212ENST00000482590 RPL39LQ96EH5 51 aaKnown RBP3.86□□□□□ -1.79
CLK1-212ENST00000482590 CNFNQ9BYD5 112 aa3.86□□□□□ -1.79
CLK1-212ENST00000482590 RNF213Q63HN8 5207 aa3.85□□□□□ -1.79
CLK1-212ENST00000482590 PYY3Q5JQD4 70 aa3.85□□□□□ -1.79
CLK1-212ENST00000482590 RAB37Q96AX2 223 aa3.85□□□□□ -1.79
CLK1-212ENST00000482590 LINC01600Q96MT4 127 aa3.85□□□□□ -1.79
CLK1-212ENST00000482590 I3L3M4 83 aa3.84□□□□□ -1.79
CLK1-212ENST00000482590 TRACP01848 142 aa3.84□□□□□ -1.79
CLK1-212ENST00000482590 SPINK6Q6UWN8 80 aa3.84□□□□□ -1.79
CLK1-212ENST00000482590 TMEM242Q9NWH2 141 aa3.84□□□□□ -1.79
CLK1-212ENST00000482590 LINC00959A0A1B0GUT2 108 aa3.83□□□□□ -1.8
CLK1-212ENST00000482590 C7orf77A4D0Y5 90 aa3.83□□□□□ -1.8
CLK1-212ENST00000482590 C11orf86A6NJI1 115 aa3.83□□□□□ -1.8
CLK1-212ENST00000482590 CKS2P33552 79 aa3.83□□□□□ -1.8
CLK1-212ENST00000482590 ATP11AUNQ6ZP68 121 aa3.83□□□□□ -1.8
CLK1-212ENST00000482590 Q6ZQT0 140 aa3.83□□□□□ -1.8
CLK1-212ENST00000482590 ST20Q9HBF5 79 aa3.83□□□□□ -1.8
CLK1-212ENST00000482590 TRBV6-5A0A0K0K1A5 114 aa3.82□□□□□ -1.8
CLK1-212ENST00000482590 hDV103S1A0JD37 113 aa3.81□□□□□ -1.8
CLK1-212ENST00000482590 FCER1GP30273 86 aa3.81□□□□□ -1.8
CLK1-212ENST00000482590 ROMO1P60602 79 aa3.81□□□□□ -1.8
CLK1-212ENST00000482590 CDC42SE2Q9NRR3 84 aa3.81□□□□□ -1.8
CLK1-212ENST00000482590 A0A1B0GUT8 65 aa3.8□□□□□ -1.8
CLK1-212ENST00000482590 HIGD1CA8MV81 97 aa3.8□□□□□ -1.8
CLK1-212ENST00000482590 FP248Q71RG6 208 aaPredicted RBP3.8□□□□□ -1.8
CLK1-212ENST00000482590 PRO1933Q9H354 126 aa3.8□□□□□ -1.8
CLK1-212ENST00000482590 LPAP08519 4548 aa3.8□□□□□ -1.8
CLK1-212ENST00000482590 IGKV2D-26A0A0A0MRZ7 120 aa3.79□□□□□ -1.8
CLK1-212ENST00000482590 PPP1R17O96001 155 aa3.79□□□□□ -1.8
CLK1-212ENST00000482590 POLR2KP53803 58 aaKnown RBP3.79□□□□□ -1.8
CLK1-212ENST00000482590 SPAG11BQ08648 103 aa3.79□□□□□ -1.8
CLK1-212ENST00000482590 C1orf137Q5JT78 98 aa3.79□□□□□ -1.8
CLK1-212ENST00000482590 KRTAP5-5Q701N2 237 aaPredicted RBP3.79□□□□□ -1.8
CLK1-212ENST00000482590 TSKUQ8WUA8 353 aa3.79□□□□□ -1.8
CLK1-212ENST00000482590 SMIM7Q9BQ49 75 aa3.79□□□□□ -1.8
CLK1-212ENST00000482590 VAMP8Q9BV40 100 aa3.79□□□□□ -1.8
CLK1-212ENST00000482590 C9orf116Q5BN46 136 aaPredicted RBP3.78□□□□□ -1.8
CLK1-212ENST00000482590 PSORS1C2Q9UIG4 136 aa3.78□□□□□ -1.8
CLK1-212ENST00000482590 UBE2D4Q9Y2X8 147 aa3.78□□□□□ -1.8
CLK1-212ENST00000482590 A0A1W2PNN7 141 aa3.77□□□□□ -1.81
CLK1-212ENST00000482590 NDUFA1O15239 70 aa3.77□□□□□ -1.81
CLK1-212ENST00000482590 NPC2P61916 151 aa3.77□□□□□ -1.81
CLK1-212ENST00000482590 ALKAL2Q6UX46 152 aa3.77□□□□□ -1.81
CLK1-212ENST00000482590 C5orf38Q86SI9 138 aa3.77□□□□□ -1.81
CLK1-212ENST00000482590 C14orf132Q9NPU4 83 aa3.77□□□□□ -1.81
CLK1-212ENST00000482590 KRTAP25-1Q3LHN0 102 aa3.76□□□□□ -1.81
CLK1-212ENST00000482590 TIMM21Q9BVV7 248 aa3.76□□□□□ -1.81
CLK1-212ENST00000482590 MRPL35Q9NZE8 188 aaKnown RBP3.76□□□□□ -1.81
CLK1-212ENST00000482590 COLCA2A8K830 154 aa3.75□□□□□ -1.81
CLK1-212ENST00000482590 UBE2D1P51668 147 aa3.75□□□□□ -1.81
CLK1-212ENST00000482590 DSCR8Q96T75 97 aa3.75□□□□□ -1.81
CLK1-212ENST00000482590 V9GYV3 84 aa3.75□□□□□ -1.81
CLK1-212ENST00000482590 IFI27P40305 119 aaPredicted RBP3.74□□□□□ -1.81
CLK1-212ENST00000482590 RPL39P62891 51 aaKnown RBP3.74□□□□□ -1.81
CLK1-212ENST00000482590 ADIRFQ15847 76 aa3.74□□□□□ -1.81
CLK1-212ENST00000482590 FAM19A2Q8N3H0 131 aa3.74□□□□□ -1.81
CLK1-212ENST00000482590 C20orf166-AS1Q96NR2 134 aa3.74□□□□□ -1.81
CLK1-212ENST00000482590 C20orf78Q9BR46 151 aa3.74□□□□□ -1.81
CLK1-212ENST00000482590 SMIM2Q9BVW6 85 aa3.74□□□□□ -1.81
CLK1-212ENST00000482590 D6R8Y8 96 aa3.73□□□□□ -1.81
CLK1-212ENST00000482590 MT-ATP8P03928 68 aa3.73□□□□□ -1.81
CLK1-212ENST00000482590 C6orf48Q9UBA6 75 aa3.73□□□□□ -1.81
CLK1-212ENST00000482590 A0A087WSZ3 146 aa3.72□□□□□ -1.81
CLK1-212ENST00000482590 TRBV30A0A0K0K1B3 111 aa3.72□□□□□ -1.81
CLK1-212ENST00000482590 A8MU10 97 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms