RNA–Protein interactions for RNA: ENST00000481098.1

GTF3C3-211, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-211ENST00000481098 IGLV1-50A0A075B6I6 118 aa2.89□□□□□ -1.95
GTF3C3-211ENST00000481098 SPART-AS1P0CW21 52 aa2.89□□□□□ -1.95
GTF3C3-211ENST00000481098 TLN1Q9Y490 2541 aaKnown RBP2.88□□□□□ -1.95
GTF3C3-211ENST00000481098 SORL1Q92673 2214 aa2.88□□□□□ -1.95
GTF3C3-211ENST00000481098 SPTA1P02549 2419 aa2.88□□□□□ -1.95
GTF3C3-211ENST00000481098 ABCA2Q9BZC7 2435 aa2.88□□□□□ -1.95
GTF3C3-211ENST00000481098 A8MWP4 228 aa2.88□□□□□ -1.95
GTF3C3-211ENST00000481098 C8orf87E5RJ46 101 aa2.88□□□□□ -1.95
GTF3C3-211ENST00000481098 KRTAP26-1Q6PEX3 210 aa2.88□□□□□ -1.95
GTF3C3-211ENST00000481098 SPTAN1Q13813 2472 aaKnown RBP2.88□□□□□ -1.95
GTF3C3-211ENST00000481098 ANKRD11Q6UB99 2663 aaPredicted RBP2.88□□□□□ -1.95
GTF3C3-211ENST00000481098 C2CD3Q4AC94 2353 aa2.88□□□□□ -1.95
GTF3C3-211ENST00000481098 WFDC10BQ8IUB3 73 aa2.87□□□□□ -1.95
GTF3C3-211ENST00000481098 WFDC13Q8IUB5 93 aa2.87□□□□□ -1.95
GTF3C3-211ENST00000481098 AKAP6Q13023 2319 aa2.86□□□□□ -1.95
GTF3C3-211ENST00000481098 DEFB131BA0A096LNP1 70 aa2.86□□□□□ -1.95
GTF3C3-211ENST00000481098 KALRNO60229 2985 aa2.86□□□□□ -1.95
GTF3C3-211ENST00000481098 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.85□□□□□ -1.952e-6■□□□□ 10.2
GTF3C3-211ENST00000481098 A0A087WSZ3 146 aa2.85□□□□□ -1.95
GTF3C3-211ENST00000481098 LINC01556Q5JQF7 62 aa2.85□□□□□ -1.95
GTF3C3-211ENST00000481098 Q8NAQ8 132 aa2.85□□□□□ -1.95
GTF3C3-211ENST00000481098 GVINP1Q7Z2Y8 2422 aa2.84□□□□□ -1.95
GTF3C3-211ENST00000481098 CELSR3Q9NYQ7 3312 aa2.84□□□□□ -1.95
GTF3C3-211ENST00000481098 SPRR1BP22528 89 aa2.84□□□□□ -1.95
GTF3C3-211ENST00000481098 LINC01554Q52M75 96 aa2.84□□□□□ -1.95
GTF3C3-211ENST00000481098 LINC00472Q9H8W2 130 aa2.84□□□□□ -1.95
GTF3C3-211ENST00000481098 CFAP47Q6ZTR5 3102 aa2.84□□□□□ -1.96
GTF3C3-211ENST00000481098 ZFHX4Q86UP3 3567 aa2.84□□□□□ -1.96
GTF3C3-211ENST00000481098 SMG1Q96Q15 3661 aaKnown RBP2.83□□□□□ -1.96
GTF3C3-211ENST00000481098 DEFB113Q30KQ7 82 aa2.83□□□□□ -1.96
GTF3C3-211ENST00000481098 SPAG11AQ6PDA7 123 aa2.83□□□□□ -1.96
GTF3C3-211ENST00000481098 SPENQ96T58 3664 aaKnown RBP2.82□□□□□ -1.96
GTF3C3-211ENST00000481098 MMP24-AS1A0A0U1RRL7 71 aa2.82□□□□□ -1.96
GTF3C3-211ENST00000481098 LINC00313P59037 77 aa2.82□□□□□ -1.96
GTF3C3-211ENST00000481098 DEFB135Q30KP9 77 aa2.82□□□□□ -1.96
GTF3C3-211ENST00000481098 ADGRG4Q8IZF6 3080 aa2.82□□□□□ -1.96
GTF3C3-211ENST00000481098 WDFY4Q6ZS81 3184 aa2.82□□□□□ -1.96
GTF3C3-211ENST00000481098 CR1P17927 2039 aa2.81□□□□□ -1.96
GTF3C3-211ENST00000481098 IGKV2-24A0A0C4DH68 120 aa2.81□□□□□ -1.96
GTF3C3-211ENST00000481098 HTN3P15516 51 aa2.81□□□□□ -1.96
GTF3C3-211ENST00000481098 SPINK7P58062 85 aa2.81□□□□□ -1.96
GTF3C3-211ENST00000481098 RPL37AP61513 92 aaKnown RBP2.81□□□□□ -1.96
GTF3C3-211ENST00000481098 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
GTF3C3-211ENST00000481098 HRNRQ86YZ3 2850 aaPredicted RBP2.81□□□□□ -1.96
GTF3C3-211ENST00000481098 TACC2O95359 2948 aa2.81□□□□□ -1.96
GTF3C3-211ENST00000481098 BDP1A6H8Y1 2624 aa2.8□□□□□ -1.96
GTF3C3-211ENST00000481098 HRES1P13985 223 aa2.8□□□□□ -1.96
GTF3C3-211ENST00000481098 RETNLBQ9BQ08 111 aa2.8□□□□□ -1.96
GTF3C3-211ENST00000481098 DMXL2Q8TDJ6 3036 aa2.8□□□□□ -1.96
GTF3C3-211ENST00000481098 CSPG4Q6UVK1 2322 aa2.8□□□□□ -1.96
GTF3C3-211ENST00000481098 DEFB4AO15263 64 aa2.79□□□□□ -1.96
GTF3C3-211ENST00000481098 ACYP2P14621 99 aa2.79□□□□□ -1.96
GTF3C3-211ENST00000481098 SPATA8Q6RVD6 105 aa2.79□□□□□ -1.96
GTF3C3-211ENST00000481098 ZFHX3Q15911 3703 aa2.79□□□□□ -1.96
GTF3C3-211ENST00000481098 DMDP11532 3685 aa2.79□□□□□ -1.96
GTF3C3-211ENST00000481098 PCOTHQ58A44 107 aa2.78□□□□□ -1.96
GTF3C3-211ENST00000481098 C8orf17Q9NRJ1 99 aa2.78□□□□□ -1.96
GTF3C3-211ENST00000481098 LOC400499M0QZD8 3231 aa2.78□□□□□ -1.96
GTF3C3-211ENST00000481098 DCHS1Q96JQ0 3298 aa2.78□□□□□ -1.97
GTF3C3-211ENST00000481098 HIVEP3Q5T1R4 2406 aa2.77□□□□□ -1.97
GTF3C3-211ENST00000481098 EYSQ5T1H1 3165 aa2.77□□□□□ -1.97
GTF3C3-211ENST00000481098 AKAP13Q12802 2813 aa2.77□□□□□ -1.97
GTF3C3-211ENST00000481098 MGAQ8IWI9 3026 aa2.76□□□□□ -1.97
GTF3C3-211ENST00000481098 A8MUU9 505 aa2.76□□□□□ -1.97
GTF3C3-211ENST00000481098 UQCR11O14957 56 aa2.76□□□□□ -1.97
GTF3C3-211ENST00000481098 MRPL34Q9BQ48 92 aaKnown RBP2.76□□□□□ -1.97
GTF3C3-211ENST00000481098 NBASA2RRP1 2371 aa2.75□□□□□ -1.97
GTF3C3-211ENST00000481098 CSMD1Q96PZ7 3565 aa2.75□□□□□ -1.97
GTF3C3-211ENST00000481098 DOPEY1Q5JWR5 2465 aa2.75□□□□□ -1.97
GTF3C3-211ENST00000481098 RIF1Q5UIP0 2472 aaKnown RBP2.75□□□□□ -1.97
GTF3C3-211ENST00000481098 A0A1B0GU69 56 aa2.75□□□□□ -1.97
GTF3C3-211ENST00000481098 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
GTF3C3-211ENST00000481098 DMAC1Q96GE9 116 aa2.75□□□□□ -1.97
GTF3C3-211ENST00000481098 ZNF292O60281 2723 aa2.75□□□□□ -1.97
GTF3C3-211ENST00000481098 DCHS2Q6V1P9 2916 aa2.75□□□□□ -1.97
GTF3C3-211ENST00000481098 BSNQ9UPA5 3926 aa2.74□□□□□ -1.97
GTF3C3-211ENST00000481098 MYO9AB2RTY4 2548 aa2.74□□□□□ -1.97
GTF3C3-211ENST00000481098 PRLHP81277 87 aa2.74□□□□□ -1.97
GTF3C3-211ENST00000481098 MIR22HGQ0VDD5 57 aa2.74□□□□□ -1.97
GTF3C3-211ENST00000481098 TLN2Q9Y4G6 2542 aa2.74□□□□□ -1.97
GTF3C3-211ENST00000481098 BOD1L1Q8NFC6 3051 aa2.74□□□□□ -1.97
GTF3C3-211ENST00000481098 CEP295Q9C0D2 2601 aa2.73□□□□□ -1.97
GTF3C3-211ENST00000481098 LRBAP50851 2863 aa2.73□□□□□ -1.97
GTF3C3-211ENST00000481098 MAP1AP78559 2803 aaPredicted RBP2.73□□□□□ -1.97
GTF3C3-211ENST00000481098 TTC28Q96AY4 2481 aa2.73□□□□□ -1.97
GTF3C3-211ENST00000481098 IGHV6-1A0A0B4J1U7 121 aa2.73□□□□□ -1.97
GTF3C3-211ENST00000481098 Q96NJ1 140 aa2.73□□□□□ -1.97
GTF3C3-211ENST00000481098 ZNF706Q9Y5V0 76 aaPredicted RBP2.73□□□□□ -1.97
GTF3C3-211ENST00000481098 ZFHX2Q9C0A1 2572 aaPredicted RBP2.73□□□□□ -1.97
GTF3C3-211ENST00000481098 A0A0G2JQZ4 141 aa2.72□□□□□ -1.97
GTF3C3-211ENST00000481098 A0A1W2PNN7 141 aa2.72□□□□□ -1.97
GTF3C3-211ENST00000481098 SPG11Q96JI7 2443 aa2.72□□□□□ -1.97
GTF3C3-211ENST00000481098 JMJD1CQ15652 2540 aa2.71□□□□□ -1.98
GTF3C3-211ENST00000481098 USP9YO00507 2555 aaPredicted RBP2.7□□□□□ -1.98
GTF3C3-211ENST00000481098 A0A096LNI7 61 aa2.7□□□□□ -1.98
GTF3C3-211ENST00000481098 USP9XQ93008 2570 aaPredicted RBP2.7□□□□□ -1.98
GTF3C3-211ENST00000481098 ASPMQ8IZT6 3477 aa2.7□□□□□ -1.98
GTF3C3-211ENST00000481098 CSAG1Q6PB30 78 aa2.69□□□□□ -1.98
GTF3C3-211ENST00000481098 ADM2Q7Z4H4 148 aa2.69□□□□□ -1.98
GTF3C3-211ENST00000481098 KRTAP13-1Q8IUC0 172 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms