RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 ZANQ9Y493 2812 aa3.88□□□□□ -1.79
LSM5-210ENST00000480956 CCDC168Q8NDH2 2452 aa3.88□□□□□ -1.79
LSM5-210ENST00000480956 KRTAP10-5P60370 271 aa3.87□□□□□ -1.79
LSM5-210ENST00000480956 COX17Q14061 63 aa3.87□□□□□ -1.79
LSM5-210ENST00000480956 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
LSM5-210ENST00000480956 SPRR4Q96PI1 79 aa3.87□□□□□ -1.79
LSM5-210ENST00000480956 UBE2D4Q9Y2X8 147 aa3.87□□□□□ -1.79
LSM5-210ENST00000480956 NOTCH3Q9UM47 2321 aa3.87□□□□□ -1.79
LSM5-210ENST00000480956 NAV2Q8IVL1 2488 aa3.87□□□□□ -1.79
LSM5-210ENST00000480956 SPRR5A0A1B0GTR4 108 aa3.87□□□□□ -1.79
LSM5-210ENST00000480956 A0A1B0GVY2 172 aa3.87□□□□□ -1.79
LSM5-210ENST00000480956 COX8AP10176 69 aa3.87□□□□□ -1.79
LSM5-210ENST00000480956 ACYP2P14621 99 aa3.87□□□□□ -1.79
LSM5-210ENST00000480956 WNK2Q9Y3S1 2297 aa3.86□□□□□ -1.79
LSM5-210ENST00000480956 ITPR3Q14573 2671 aa3.86□□□□□ -1.79
LSM5-210ENST00000480956 PDZD2O15018 2839 aa3.86□□□□□ -1.79
LSM5-210ENST00000480956 AKAP9Q99996 3911 aa3.86□□□□□ -1.79
LSM5-210ENST00000480956 ATP5EP2Q5VTU8 51 aa3.86□□□□□ -1.79
LSM5-210ENST00000480956 GNG13Q9P2W3 67 aa3.86□□□□□ -1.79
LSM5-210ENST00000480956 SETXQ7Z333 2677 aaKnown RBP3.86□□□□□ -1.79
LSM5-210ENST00000480956 FLNAP21333 2647 aaKnown RBP3.85□□□□□ -1.79
LSM5-210ENST00000480956 CUBNO60494 3623 aa3.84□□□□□ -1.79
LSM5-210ENST00000480956 BAHCC1Q9P281 2608 aa3.84□□□□□ -1.79
LSM5-210ENST00000480956 BRD3OSQ6XYD6 125 aa3.84□□□□□ -1.79
LSM5-210ENST00000480956 IFI27P40305 119 aaPredicted RBP3.84□□□□□ -1.8
LSM5-210ENST00000480956 SERF2P84101 59 aa3.84□□□□□ -1.8
LSM5-210ENST00000480956 UNQ6190/PRO20217Q6UXQ8 127 aa3.84□□□□□ -1.8
LSM5-210ENST00000480956 FLNBO75369 2602 aaKnown RBP3.83□□□□□ -1.8
LSM5-210ENST00000480956 NOTCH2Q04721 2471 aa3.83□□□□□ -1.8
LSM5-210ENST00000480956 TLN2Q9Y4G6 2542 aa3.83□□□□□ -1.8
LSM5-210ENST00000480956 KRTAP13-4Q3LI77 160 aa3.83□□□□□ -1.8
LSM5-210ENST00000480956 MYO9AB2RTY4 2548 aa3.83□□□□□ -1.8
LSM5-210ENST00000480956 RPL39P5Q59GN2 51 aa3.82□□□□□ -1.8
LSM5-210ENST00000480956 TEX15Q9BXT5 2789 aa3.82□□□□□ -1.8
LSM5-210ENST00000480956 ACANP16112 2415 aa3.82□□□□□ -1.8
LSM5-210ENST00000480956 HILPDAQ9Y5L2 63 aa3.81□□□□□ -1.8
LSM5-210ENST00000480956 CREBBPQ92793 2442 aa3.81□□□□□ -1.8
LSM5-210ENST00000480956 OTOGQ6ZRI0 2925 aa3.81□□□□□ -1.8
LSM5-210ENST00000480956 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.81□□□□□ -1.8
LSM5-210ENST00000480956 SONP18583 2426 aaKnown RBP3.8□□□□□ -1.8
LSM5-210ENST00000480956 SMR3AQ99954 134 aa3.8□□□□□ -1.8
LSM5-210ENST00000480956 KAAG1Q9UBP8 84 aa3.8□□□□□ -1.8
LSM5-210ENST00000480956 ABCA1O95477 2261 aa3.79□□□□□ -1.8
LSM5-210ENST00000480956 CSPG4Q6UVK1 2322 aa3.79□□□□□ -1.8
LSM5-210ENST00000480956 H3BVH4 76 aa3.79□□□□□ -1.8
LSM5-210ENST00000480956 PLAC8Q9NZF1 115 aa3.79□□□□□ -1.8
LSM5-210ENST00000480956 SPINK9Q5DT21 86 aa3.78□□□□□ -1.8
LSM5-210ENST00000480956 C10orf99Q6UWK7 81 aa3.78□□□□□ -1.8
LSM5-210ENST00000480956 LINC00472Q9H8W2 130 aa3.78□□□□□ -1.8
LSM5-210ENST00000480956 A0A096LNT2 108 aa3.78□□□□□ -1.8
LSM5-210ENST00000480956 TRBV7-4A0A0J9YYF1 115 aa3.78□□□□□ -1.8
LSM5-210ENST00000480956 TRBV30A0A0K0K1B3 111 aa3.78□□□□□ -1.8
LSM5-210ENST00000480956 H0Y9P7 68 aa3.78□□□□□ -1.8
LSM5-210ENST00000480956 C3orf79P0CE67 100 aa3.78□□□□□ -1.8
LSM5-210ENST00000480956 MXRA5Q9NR99 2828 aa3.78□□□□□ -1.8
LSM5-210ENST00000480956 APELAP0DMC3 54 aa3.77□□□□□ -1.81
LSM5-210ENST00000480956 ANK3Q12955 4377 aaKnown RBP3.77□□□□□ -1.81
LSM5-210ENST00000480956 NAV3Q8IVL0 2385 aa3.77□□□□□ -1.81
LSM5-210ENST00000480956 TMEM263Q8WUH6 116 aaKnown RBP3.77□□□□□ -1.81
LSM5-210ENST00000480956 ZCCHC13Q8WW36 166 aaKnown RBP3.77□□□□□ -1.81
LSM5-210ENST00000480956 A0A1B0GUT8 65 aa3.76□□□□□ -1.81
LSM5-210ENST00000480956 PRB2P02812 416 aaPredicted RBP3.76□□□□□ -1.81
LSM5-210ENST00000480956 KRTAP10-3P60369 221 aa3.76□□□□□ -1.81
LSM5-210ENST00000480956 MTORP42345 2549 aa3.76□□□□□ -1.81
LSM5-210ENST00000480956 IAPPP10997 89 aa3.75□□□□□ -1.81
LSM5-210ENST00000480956 KRTAP10-1P60331 282 aa3.75□□□□□ -1.81
LSM5-210ENST00000480956 TEP1Q99973 2627 aaKnown RBP3.75□□□□□ -1.81
LSM5-210ENST00000480956 HIVEP1P15822 2718 aa3.75□□□□□ -1.81
LSM5-210ENST00000480956 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
LSM5-210ENST00000480956 M0R1W7 72 aa3.75□□□□□ -1.81
LSM5-210ENST00000480956 SPATA8Q6RVD6 105 aa3.75□□□□□ -1.81
LSM5-210ENST00000480956 TNCP24821 2201 aa3.74□□□□□ -1.81
LSM5-210ENST00000480956 H3BUX3 64 aa3.73□□□□□ -1.81
LSM5-210ENST00000480956 DEFB112Q30KQ8 113 aa3.73□□□□□ -1.81
LSM5-210ENST00000480956 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.73□□□□□ -1.81
LSM5-210ENST00000480956 FAM103A1Q9BTL3 118 aaKnown RBP3.73□□□□□ -1.81
LSM5-210ENST00000480956 MAST4O15021 2626 aa3.73□□□□□ -1.81
LSM5-210ENST00000480956 NF1P21359 2839 aa3.73□□□□□ -1.81
LSM5-210ENST00000480956 F8P00451 2351 aa3.73□□□□□ -1.81
LSM5-210ENST00000480956 SMIM27A0A1W2PRY6 76 aa3.73□□□□□ -1.81
LSM5-210ENST00000480956 KRTAP5-9P26371 169 aa3.73□□□□□ -1.81
LSM5-210ENST00000480956 SPINK7P58062 85 aa3.73□□□□□ -1.81
LSM5-210ENST00000480956 NSD1Q96L73 2696 aaPredicted RBP3.72□□□□□ -1.81
LSM5-210ENST00000480956 ARL14EPLP0DKL9 152 aa3.72□□□□□ -1.81
LSM5-210ENST00000480956 SETD2Q9BYW2 2564 aaPredicted RBP3.71□□□□□ -1.82
LSM5-210ENST00000480956 NCR3O14931 201 aa3.71□□□□□ -1.82
LSM5-210ENST00000480956 HIVEP2P31629 2446 aa3.71□□□□□ -1.82
LSM5-210ENST00000480956 C10orf113Q5VZT2 155 aa3.7□□□□□ -1.82
LSM5-210ENST00000480956 MINOS1Q5TGZ0 78 aa3.7□□□□□ -1.82
LSM5-210ENST00000480956 SMIM11BQ8TCY0 68 aa3.7□□□□□ -1.82
LSM5-210ENST00000480956 NIPBLQ6KC79 2804 aaeCLIP3.69□□□□□ -1.82
LSM5-210ENST00000480956 G3V318 75 aa3.69□□□□□ -1.82
LSM5-210ENST00000480956 PLAC4Q8WY50 150 aa3.69□□□□□ -1.82
LSM5-210ENST00000480956 WT1-ASQ06250 92 aa3.68□□□□□ -1.82
LSM5-210ENST00000480956 LINC00575Q6W349 94 aa3.68□□□□□ -1.82
LSM5-210ENST00000480956 TMEM167AQ8TBQ9 72 aa3.68□□□□□ -1.82
LSM5-210ENST00000480956 Q6ZRX8 168 aa3.67□□□□□ -1.82
LSM5-210ENST00000480956 JMJD1CQ15652 2540 aa3.67□□□□□ -1.82
LSM5-210ENST00000480956 NDUFB1O75438 58 aa3.67□□□□□ -1.82
LSM5-210ENST00000480956 NDUFA3O95167 84 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms