RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 SNRPEP62304 92 aaKnown RBP3.89□□□□□ -1.79
COL17A1-205ENST00000480127 PCP2Q8IVA1 136 aa3.89□□□□□ -1.79
COL17A1-205ENST00000480127 SMIM11BQ8TCY0 68 aa3.88□□□□□ -1.79
COL17A1-205ENST00000480127 HIST1H4GQ99525 98 aa3.88□□□□□ -1.79
COL17A1-205ENST00000480127 SNHG12Q9BXW3 62 aa3.88□□□□□ -1.79
COL17A1-205ENST00000480127 hADV29S1A0JD25 119 aa3.87□□□□□ -1.79
COL17A1-205ENST00000480127 SCGB1D1O95968 90 aa3.87□□□□□ -1.79
COL17A1-205ENST00000480127 CFC1BP0CG36 223 aa3.87□□□□□ -1.79
COL17A1-205ENST00000480127 KRTAP10-6P60371 365 aaPredicted RBP3.87□□□□□ -1.79
COL17A1-205ENST00000480127 A0A0G2JQZ4 141 aa3.86□□□□□ -1.79
COL17A1-205ENST00000480127 COA6Q5JTJ3 125 aaKnown RBP3.86□□□□□ -1.79
COL17A1-205ENST00000480127 Q6JHZ5 121 aa3.86□□□□□ -1.79
COL17A1-205ENST00000480127 Q6ZQY7 126 aa3.86□□□□□ -1.79
COL17A1-205ENST00000480127 C12orf57Q99622 126 aa3.86□□□□□ -1.79
COL17A1-205ENST00000480127 IGLV5-48A0A075B6I7 105 aa3.85□□□□□ -1.79
COL17A1-205ENST00000480127 BVES-AS1Q5T3Y7 98 aa3.85□□□□□ -1.79
COL17A1-205ENST00000480127 C1orf195Q5TG92 126 aa3.85□□□□□ -1.79
COL17A1-205ENST00000480127 Q6Q795 121 aa3.85□□□□□ -1.79
COL17A1-205ENST00000480127 RAB37Q96AX2 223 aa3.85□□□□□ -1.79
COL17A1-205ENST00000480127 S100A1P23297 94 aa3.84□□□□□ -1.79
COL17A1-205ENST00000480127 ATP11AUNQ6ZP68 121 aa3.84□□□□□ -1.79
COL17A1-205ENST00000480127 SMIM29Q86T20 159 aa3.84□□□□□ -1.79
COL17A1-205ENST00000480127 CLEC2BQ92478 149 aa3.84□□□□□ -1.79
COL17A1-205ENST00000480127 KRTAP9-7A8MTY7 169 aa3.83□□□□□ -1.8
COL17A1-205ENST00000480127 LINC00575Q6W349 94 aa3.83□□□□□ -1.8
COL17A1-205ENST00000480127 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
COL17A1-205ENST00000480127 LST1O00453 97 aa3.82□□□□□ -1.8
COL17A1-205ENST00000480127 OCIAD2Q56VL3 154 aa3.82□□□□□ -1.8
COL17A1-205ENST00000480127 Q5XG85 94 aa3.82□□□□□ -1.8
COL17A1-205ENST00000480127 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.82□□□□□ -1.8
COL17A1-205ENST00000480127 OBSCN-AS1Q96MR7 158 aa3.82□□□□□ -1.8
COL17A1-205ENST00000480127 HIST1H2BLQ99880 126 aa3.82□□□□□ -1.8
COL17A1-205ENST00000480127 SS18L2Q9UHA2 77 aa3.82□□□□□ -1.8
COL17A1-205ENST00000480127 TRBV7-7A0A0K0K1E9 115 aa3.81□□□□□ -1.8
COL17A1-205ENST00000480127 H3BUT2 72 aa3.81□□□□□ -1.8
COL17A1-205ENST00000480127 GHRHP01286 108 aa3.81□□□□□ -1.8
COL17A1-205ENST00000480127 RPL37P61927 97 aaKnown RBP3.81□□□□□ -1.8
COL17A1-205ENST00000480127 HIST3H2BBQ8N257 126 aa3.81□□□□□ -1.8
COL17A1-205ENST00000480127 FABP2P12104 132 aa3.8□□□□□ -1.8
COL17A1-205ENST00000480127 IGFL1Q6UW32 110 aa3.8□□□□□ -1.8
COL17A1-205ENST00000480127 PPDPFLQ8WWR9 84 aa3.8□□□□□ -1.8
COL17A1-205ENST00000480127 Q96NJ1 140 aa3.79□□□□□ -1.8
COL17A1-205ENST00000480127 TRBV20-1A0A075B6N2 111 aa3.78□□□□□ -1.8
COL17A1-205ENST00000480127 TMEM238LA0A1B0GVL6 79 aa3.78□□□□□ -1.8
COL17A1-205ENST00000480127 A6NJY4 79 aa3.78□□□□□ -1.8
COL17A1-205ENST00000480127 DNAL4O96015 105 aa3.78□□□□□ -1.8
COL17A1-205ENST00000480127 SIGMAR1Q99720 223 aa3.78□□□□□ -1.8
COL17A1-205ENST00000480127 A0A1B0GV72 72 aa3.77□□□□□ -1.81
COL17A1-205ENST00000480127 H0YGX0 51 aa3.77□□□□□ -1.81
COL17A1-205ENST00000480127 COX8AP10176 69 aa3.77□□□□□ -1.81
COL17A1-205ENST00000480127 C14orf144Q96I85 54 aa3.77□□□□□ -1.81
COL17A1-205ENST00000480127 VAMP8Q9BV40 100 aa3.77□□□□□ -1.81
COL17A1-205ENST00000480127 PAM16Q9Y3D7 125 aa3.77□□□□□ -1.81
COL17A1-205ENST00000480127 PSMB2P49721 201 aa3.76□□□□□ -1.81
COL17A1-205ENST00000480127 SPATA45Q537H7 98 aa3.76□□□□□ -1.81
COL17A1-205ENST00000480127 A0A087WSZ3 146 aa3.75□□□□□ -1.81
COL17A1-205ENST00000480127 FAM236DA0A1B0GTK5 79 aa3.75□□□□□ -1.81
COL17A1-205ENST00000480127 H3BMG7 143 aa3.75□□□□□ -1.81
COL17A1-205ENST00000480127 FAM236CP0DP71 79 aa3.75□□□□□ -1.81
COL17A1-205ENST00000480127 NDUFV3P56181 108 aaKnown RBP3.75□□□□□ -1.81
COL17A1-205ENST00000480127 TEN1Q86WV5 123 aa3.75□□□□□ -1.81
COL17A1-205ENST00000480127 A0A0B4J2C4 111 aa3.73□□□□□ -1.81
COL17A1-205ENST00000480127 COX6CP09669 75 aa3.73□□□□□ -1.81
COL17A1-205ENST00000480127 CFC1P0CG37 223 aa3.73□□□□□ -1.81
COL17A1-205ENST00000480127 Q75L30 129 aa3.73□□□□□ -1.81
COL17A1-205ENST00000480127 PRO1854Q9UHT4 67 aa3.73□□□□□ -1.81
COL17A1-205ENST00000480127 FLGP20930 4061 aaPredicted RBP3.72□□□□□ -1.81
COL17A1-205ENST00000480127 DLEU1O43261 78 aa3.72□□□□□ -1.81
COL17A1-205ENST00000480127 ANKRD29Q8N6D5 301 aa3.72□□□□□ -1.81
COL17A1-205ENST00000480127 VPS25Q9BRG1 176 aa3.72□□□□□ -1.81
COL17A1-205ENST00000480127 ORMDL1Q9P0S3 153 aa3.72□□□□□ -1.81
COL17A1-205ENST00000480127 SSPOA2VEC9 5147 aa3.72□□□□□ -1.81
COL17A1-205ENST00000480127 H3BQ85 93 aa3.71□□□□□ -1.82
COL17A1-205ENST00000480127 IGKV4-1P06312 121 aa3.71□□□□□ -1.82
COL17A1-205ENST00000480127 DSCR10P59022 87 aa3.71□□□□□ -1.82
COL17A1-205ENST00000480127 CEND1Q8N111 149 aa3.71□□□□□ -1.82
COL17A1-205ENST00000480127 HIGD1BQ9P298 99 aa3.71□□□□□ -1.82
COL17A1-205ENST00000480127 USH2AO75445 5202 aa3.71□□□□□ -1.82
COL17A1-205ENST00000480127 A0A1B0GX51 115 aa3.7□□□□□ -1.82
COL17A1-205ENST00000480127 TRACP01848 142 aa3.7□□□□□ -1.82
COL17A1-205ENST00000480127 LINC00313P59037 77 aa3.7□□□□□ -1.82
COL17A1-205ENST00000480127 SCGB1C2P0DMR2 95 aa3.69□□□□□ -1.82
COL17A1-205ENST00000480127 FAM218AQ96MZ4 157 aa3.69□□□□□ -1.82
COL17A1-205ENST00000480127 IGHV6-1A0A0B4J1U7 121 aa3.68□□□□□ -1.82
COL17A1-205ENST00000480127 TMEM256-PLSCR3K7ERE1 68 aa3.68□□□□□ -1.82
COL17A1-205ENST00000480127 TRIAP1O43715 76 aa3.68□□□□□ -1.82
COL17A1-205ENST00000480127 CCKP06307 115 aa3.68□□□□□ -1.82
COL17A1-205ENST00000480127 LYRM7Q5U5X0 104 aa3.68□□□□□ -1.82
COL17A1-205ENST00000480127 RBM12B-AS1Q9P1G2 102 aa3.68□□□□□ -1.82
COL17A1-205ENST00000480127 FXYD2P54710 66 aa3.67□□□□□ -1.82
COL17A1-205ENST00000480127 HSD52Q0P140 79 aa3.67□□□□□ -1.82
COL17A1-205ENST00000480127 DEFB116Q30KQ4 102 aa3.67□□□□□ -1.82
COL17A1-205ENST00000480127 KRTAP9-8Q9BYQ0 159 aa3.67□□□□□ -1.82
COL17A1-205ENST00000480127 KRTAP4-8Q9BYQ9 185 aa3.67□□□□□ -1.82
COL17A1-205ENST00000480127 K7ERJ3 54 aa3.66□□□□□ -1.82
COL17A1-205ENST00000480127 C2orf91Q6ZV80 131 aa3.66□□□□□ -1.82
COL17A1-205ENST00000480127 C20orf166-AS1Q96NR2 134 aa3.66□□□□□ -1.82
COL17A1-205ENST00000480127 DSCR8Q96T75 97 aa3.66□□□□□ -1.82
COL17A1-205ENST00000480127 FCGBPQ9Y6R7 5405 aaPredicted RBP3.66□□□□□ -1.82
COL17A1-205ENST00000480127 TRBV7-4A0A0J9YYF1 115 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms