RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 FAM236CP0DP71 79 aa4.81□□□□□ -1.64
GPNMB-211ENST00000479625 NMUP48645 174 aa4.81□□□□□ -1.64
GPNMB-211ENST00000479625 Q96NJ1 140 aa4.81□□□□□ -1.64
GPNMB-211ENST00000479625 SPANXCQ9NY87 97 aa4.81□□□□□ -1.64
GPNMB-211ENST00000479625 PMCHL2Q9BQD1 86 aa4.8□□□□□ -1.64
GPNMB-211ENST00000479625 HERVK_113P61574 105 aa4.79□□□□□ -1.64
GPNMB-211ENST00000479625 LINC00308Q8TCZ7 52 aa4.79□□□□□ -1.64
GPNMB-211ENST00000479625 CHCHD1Q96BP2 118 aaKnown RBP4.79□□□□□ -1.64
GPNMB-211ENST00000479625 SPANXDQ9BXN6 97 aa4.79□□□□□ -1.64
GPNMB-211ENST00000479625 IGFL1Q6UW32 110 aa4.78□□□□□ -1.64
GPNMB-211ENST00000479625 LITAFQ99732 161 aa4.78□□□□□ -1.64
GPNMB-211ENST00000479625 PLNP26678 52 aa4.77□□□□□ -1.65
GPNMB-211ENST00000479625 TRBV7-7A0A0K0K1E9 115 aa4.76□□□□□ -1.65
GPNMB-211ENST00000479625 A8MUU9 505 aa4.76□□□□□ -1.65
GPNMB-211ENST00000479625 HSBP1O75506 76 aa4.76□□□□□ -1.65
GPNMB-211ENST00000479625 DPM2O94777 84 aa4.76□□□□□ -1.65
GPNMB-211ENST00000479625 A0A1B0GWB2 263 aa4.75□□□□□ -1.65
GPNMB-211ENST00000479625 KRTAP16-1A8MUX0 517 aa4.75□□□□□ -1.65
GPNMB-211ENST00000479625 IGKCP01834 107 aa4.75□□□□□ -1.65
GPNMB-211ENST00000479625 KRTAP20-1Q3LI63 56 aa4.75□□□□□ -1.65
GPNMB-211ENST00000479625 CLLU1Q5K131 121 aa4.75□□□□□ -1.65
GPNMB-211ENST00000479625 UQCC3Q6UW78 93 aa4.75□□□□□ -1.65
GPNMB-211ENST00000479625 LINC00518Q8N0U6 118 aa4.75□□□□□ -1.65
GPNMB-211ENST00000479625 TRBV7-6A0A0J9YX20 115 aa4.73□□□□□ -1.65
GPNMB-211ENST00000479625 F8WEM9 126 aa4.73□□□□□ -1.65
GPNMB-211ENST00000479625 LEPROTL1O95214 131 aa4.73□□□□□ -1.65
GPNMB-211ENST00000479625 HRES1P13985 223 aa4.73□□□□□ -1.65
GPNMB-211ENST00000479625 MPLKIPQ8TAP9 179 aa4.73□□□□□ -1.65
GPNMB-211ENST00000479625 CLEC2BQ92478 149 aa4.73□□□□□ -1.65
GPNMB-211ENST00000479625 E9PLD3 99 aa4.72□□□□□ -1.65
GPNMB-211ENST00000479625 IGKV2D-30A0A075B6S6 120 aa4.71□□□□□ -1.66
GPNMB-211ENST00000479625 SERF1AO75920 110 aa4.71□□□□□ -1.66
GPNMB-211ENST00000479625 LST1O00453 97 aa4.7□□□□□ -1.66
GPNMB-211ENST00000479625 TIMM17BO60830 172 aa4.7□□□□□ -1.66
GPNMB-211ENST00000479625 FABP4P15090 132 aa4.7□□□□□ -1.66
GPNMB-211ENST00000479625 TTTY13Q9BZ97 58 aa4.7□□□□□ -1.66
GPNMB-211ENST00000479625 RBM12B-AS1Q9P1G2 102 aa4.7□□□□□ -1.66
GPNMB-211ENST00000479625 DSCR10P59022 87 aa4.69□□□□□ -1.66
GPNMB-211ENST00000479625 A6NDN8 102 aa4.68□□□□□ -1.66
GPNMB-211ENST00000479625 Q6JHZ5 121 aa4.68□□□□□ -1.66
GPNMB-211ENST00000479625 KRTAP2-2Q9BYT5 123 aa4.68□□□□□ -1.66
GPNMB-211ENST00000479625 ZNF815PA8K554 130 aa4.67□□□□□ -1.66
GPNMB-211ENST00000479625 NHP2Q9NX24 153 aaKnown RBP4.67□□□□□ -1.66
GPNMB-211ENST00000479625 A4D1N5 150 aa4.66□□□□□ -1.66
GPNMB-211ENST00000479625 Q6ZQY7 126 aa4.66□□□□□ -1.66
GPNMB-211ENST00000479625 SLC7A5P1Q8MH63 180 aa4.66□□□□□ -1.66
GPNMB-211ENST00000479625 SMIM11BQ8TCY0 68 aa4.66□□□□□ -1.66
GPNMB-211ENST00000479625 YPEL4Q96NS1 127 aa4.66□□□□□ -1.66
GPNMB-211ENST00000479625 HSPB8Q9UJY1 196 aa4.66□□□□□ -1.66
GPNMB-211ENST00000479625 MDN1Q9NU22 5596 aa4.65□□□□□ -1.66
GPNMB-211ENST00000479625 TRAV13-2A0A0B4J235 113 aa4.65□□□□□ -1.67
GPNMB-211ENST00000479625 NOTCH2NLQ7Z3S9 236 aa4.65□□□□□ -1.67
GPNMB-211ENST00000479625 H3BUT2 72 aa4.64□□□□□ -1.67
GPNMB-211ENST00000479625 OCIAD2Q56VL3 154 aa4.64□□□□□ -1.67
GPNMB-211ENST00000479625 KRTAP10-7P60409 375 aaPredicted RBP4.63□□□□□ -1.67
GPNMB-211ENST00000479625 Q6ZVH6 145 aa4.63□□□□□ -1.67
GPNMB-211ENST00000479625 APOC3P02656 99 aa4.61□□□□□ -1.67
GPNMB-211ENST00000479625 LINC00575Q6W349 94 aa4.61□□□□□ -1.67
GPNMB-211ENST00000479625 SS18L2Q9UHA2 77 aa4.61□□□□□ -1.67
GPNMB-211ENST00000479625 A8MWP4 228 aa4.6□□□□□ -1.67
GPNMB-211ENST00000479625 TRGC2P03986 189 aa4.6□□□□□ -1.67
GPNMB-211ENST00000479625 SIGMAR1Q99720 223 aa4.6□□□□□ -1.67
GPNMB-211ENST00000479625 KMT2DO14686 5537 aa4.6□□□□□ -1.67
GPNMB-211ENST00000479625 hADV29S1A0JD25 119 aa4.59□□□□□ -1.67
GPNMB-211ENST00000479625 SCGB1D4Q6XE38 83 aa4.59□□□□□ -1.67
GPNMB-211ENST00000479625 MUSTN1Q8IVN3 82 aa4.59□□□□□ -1.67
GPNMB-211ENST00000479625 A0A087WSZ3 146 aa4.58□□□□□ -1.68
GPNMB-211ENST00000479625 SYS1-DBNDD2H3BUS1 97 aa4.58□□□□□ -1.68
GPNMB-211ENST00000479625 SNAPINO95295 136 aa4.58□□□□□ -1.68
GPNMB-211ENST00000479625 COLCA2A8K830 154 aa4.57□□□□□ -1.68
GPNMB-211ENST00000479625 MTURNQ8N3F0 131 aa4.57□□□□□ -1.68
GPNMB-211ENST00000479625 IFITM1P13164 125 aa4.56□□□□□ -1.68
GPNMB-211ENST00000479625 LINC00313P59037 77 aa4.56□□□□□ -1.68
GPNMB-211ENST00000479625 SVBPQ8N300 66 aa4.56□□□□□ -1.68
GPNMB-211ENST00000479625 VAMP3Q15836 100 aa4.55□□□□□ -1.68
GPNMB-211ENST00000479625 LINC01545Q5VT33 79 aa4.55□□□□□ -1.68
GPNMB-211ENST00000479625 COPS9Q8WXC6 57 aa4.55□□□□□ -1.68
GPNMB-211ENST00000479625 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.54□□□□□ -1.68
GPNMB-211ENST00000479625 TEN1Q86WV5 123 aa4.54□□□□□ -1.68
GPNMB-211ENST00000479625 SNHG12Q9BXW3 62 aa4.54□□□□□ -1.68
GPNMB-211ENST00000479625 A6NN06 94 aa4.53□□□□□ -1.68
GPNMB-211ENST00000479625 SCGB1D1O95968 90 aa4.53□□□□□ -1.68
GPNMB-211ENST00000479625 KRTAP5-9P26371 169 aa4.53□□□□□ -1.68
GPNMB-211ENST00000479625 NDUFA5Q16718 116 aa4.53□□□□□ -1.68
GPNMB-211ENST00000479625 PPDPFLQ8WWR9 84 aa4.52□□□□□ -1.69
GPNMB-211ENST00000479625 IGKV4-1P06312 121 aa4.51□□□□□ -1.69
GPNMB-211ENST00000479625 KRTAP5-11Q6L8G4 156 aa4.51□□□□□ -1.69
GPNMB-211ENST00000479625 SPINK7P58062 85 aa4.5□□□□□ -1.69
GPNMB-211ENST00000479625 PET117Q6UWS5 81 aa4.5□□□□□ -1.69
GPNMB-211ENST00000479625 KRTAP2-3P0C7H8 128 aa4.49□□□□□ -1.69
GPNMB-211ENST00000479625 DEFB116Q30KQ4 102 aa4.49□□□□□ -1.69
GPNMB-211ENST00000479625 WFDC13Q8IUB5 93 aa4.49□□□□□ -1.69
GPNMB-211ENST00000479625 KRTAP2-4Q9BYR9 128 aa4.49□□□□□ -1.69
GPNMB-211ENST00000479625 IGHV6-1A0A0B4J1U7 121 aa4.48□□□□□ -1.69
GPNMB-211ENST00000479625 C3orf79P0CE67 100 aa4.48□□□□□ -1.69
GPNMB-211ENST00000479625 A0A1W2PNM2 257 aa4.47□□□□□ -1.69
GPNMB-211ENST00000479625 NDUFV3P56181 108 aaKnown RBP4.47□□□□□ -1.69
GPNMB-211ENST00000479625 ATOH7Q8N100 152 aa4.47□□□□□ -1.69
GPNMB-211ENST00000479625 ZCCHC13Q8WW36 166 aaKnown RBP4.47□□□□□ -1.69
GPNMB-211ENST00000479625 MT1BP07438 61 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms