RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 SPAG11AQ6PDA7 123 aa3.72□□□□□ -1.81
HOXB3-209ENST00000478644 MIR7-3HGQ8N6C7 128 aa3.72□□□□□ -1.81
HOXB3-209ENST00000478644 Q8NDZ9 215 aa3.72□□□□□ -1.81
HOXB3-209ENST00000478644 RNF213Q63HN8 5207 aa3.72□□□□□ -1.81
HOXB3-209ENST00000478644 IGKV2D-26A0A0A0MRZ7 120 aa3.71□□□□□ -1.82
HOXB3-209ENST00000478644 M0R378 163 aa3.71□□□□□ -1.82
HOXB3-209ENST00000478644 SCGB1C2P0DMR2 95 aa3.71□□□□□ -1.82
HOXB3-209ENST00000478644 AKR1D1P51857 326 aa3.71□□□□□ -1.82
HOXB3-209ENST00000478644 ZNF706Q9Y5V0 76 aaPredicted RBP3.71□□□□□ -1.82
HOXB3-209ENST00000478644 C20orf202A1L168 122 aa3.7□□□□□ -1.82
HOXB3-209ENST00000478644 KRTDAPP60985 99 aa3.7□□□□□ -1.82
HOXB3-209ENST00000478644 KRTAP13-1Q8IUC0 172 aa3.7□□□□□ -1.82
HOXB3-209ENST00000478644 HIST3H2BBQ8N257 126 aa3.7□□□□□ -1.82
HOXB3-209ENST00000478644 IGKV2-28A0A075B6P5 120 aa3.69□□□□□ -1.82
HOXB3-209ENST00000478644 TRBV10-2A0A0K0K1G8 114 aa3.69□□□□□ -1.82
HOXB3-209ENST00000478644 TIMM17BO60830 172 aa3.69□□□□□ -1.82
HOXB3-209ENST00000478644 IGKV2D-28P01615 120 aa3.69□□□□□ -1.82
HOXB3-209ENST00000478644 HIST1H2BLQ99880 126 aa3.69□□□□□ -1.82
HOXB3-209ENST00000478644 TMEM126AQ9H061 195 aa3.69□□□□□ -1.82
HOXB3-209ENST00000478644 KCNQ1DNQ9H478 68 aa3.69□□□□□ -1.82
HOXB3-209ENST00000478644 NDUFC2O95298 119 aa3.68□□□□□ -1.82
HOXB3-209ENST00000478644 Q1RN00 199 aa3.68□□□□□ -1.82
HOXB3-209ENST00000478644 DAND5Q8N907 189 aa3.68□□□□□ -1.82
HOXB3-209ENST00000478644 LINC00304Q8N9R0 145 aa3.68□□□□□ -1.82
HOXB3-209ENST00000478644 FAM236DA0A1B0GTK5 79 aa3.67□□□□□ -1.82
HOXB3-209ENST00000478644 ZNF815PA8K554 130 aa3.67□□□□□ -1.82
HOXB3-209ENST00000478644 FAM236CP0DP71 79 aa3.67□□□□□ -1.82
HOXB3-209ENST00000478644 S100A2P29034 98 aa3.67□□□□□ -1.82
HOXB3-209ENST00000478644 SPRR1AP35321 89 aa3.67□□□□□ -1.82
HOXB3-209ENST00000478644 TPRXLQ17RH7 258 aa3.67□□□□□ -1.82
HOXB3-209ENST00000478644 TRBV10-3A0A0K0K1G6 114 aa3.66□□□□□ -1.82
HOXB3-209ENST00000478644 KRTAP16-1A8MUX0 517 aa3.66□□□□□ -1.82
HOXB3-209ENST00000478644 NCR3O14931 201 aa3.66□□□□□ -1.82
HOXB3-209ENST00000478644 IGLV6-57P01721 117 aa3.66□□□□□ -1.82
HOXB3-209ENST00000478644 SOSTDC1Q6X4U4 206 aa3.66□□□□□ -1.82
HOXB3-209ENST00000478644 FP248Q71RG6 208 aaPredicted RBP3.66□□□□□ -1.82
HOXB3-209ENST00000478644 LINC00308Q8TCZ7 52 aa3.66□□□□□ -1.82
HOXB3-209ENST00000478644 MIEN1Q9BRT3 115 aa3.66□□□□□ -1.82
HOXB3-209ENST00000478644 SS18L2Q9UHA2 77 aa3.66□□□□□ -1.82
HOXB3-209ENST00000478644 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
HOXB3-209ENST00000478644 SPINK1P00995 79 aa3.65□□□□□ -1.83
HOXB3-209ENST00000478644 RPS29P62273 56 aaKnown RBP3.65□□□□□ -1.83
HOXB3-209ENST00000478644 PRLHP81277 87 aa3.65□□□□□ -1.83
HOXB3-209ENST00000478644 ATOH7Q8N100 152 aa3.65□□□□□ -1.83
HOXB3-209ENST00000478644 TTTY13Q9BZ97 58 aa3.65□□□□□ -1.83
HOXB3-209ENST00000478644 SPANXCQ9NY87 97 aa3.65□□□□□ -1.83
HOXB3-209ENST00000478644 IFITM1P13164 125 aa3.64□□□□□ -1.83
HOXB3-209ENST00000478644 COPS9Q8WXC6 57 aa3.64□□□□□ -1.83
HOXB3-209ENST00000478644 SPANXDQ9BXN6 97 aa3.64□□□□□ -1.83
HOXB3-209ENST00000478644 ETDCA0A1B0GVM5 59 aa3.63□□□□□ -1.83
HOXB3-209ENST00000478644 NPC2P61916 151 aa3.63□□□□□ -1.83
HOXB3-209ENST00000478644 KRTAP13-2Q52LG2 175 aa3.63□□□□□ -1.83
HOXB3-209ENST00000478644 S100A7L2Q5SY68 101 aa3.63□□□□□ -1.83
HOXB3-209ENST00000478644 SSBP3-AS1Q7Z2R9 100 aa3.63□□□□□ -1.83
HOXB3-209ENST00000478644 PCP2Q8IVA1 136 aa3.63□□□□□ -1.83
HOXB3-209ENST00000478644 ANKRD29Q8N6D5 301 aa3.63□□□□□ -1.83
HOXB3-209ENST00000478644 TRAV23DV6A0A075B6W5 121 aa3.62□□□□□ -1.83
HOXB3-209ENST00000478644 ZNF73O43830 326 aaPredicted RBP3.62□□□□□ -1.83
HOXB3-209ENST00000478644 HINT1P49773 126 aaPredicted RBP3.62□□□□□ -1.83
HOXB3-209ENST00000478644 SMCR5Q8TEV8 140 aa3.62□□□□□ -1.83
HOXB3-209ENST00000478644 SPRR4Q96PI1 79 aa3.62□□□□□ -1.83
HOXB3-209ENST00000478644 HIGD2AQ9BW72 106 aa3.62□□□□□ -1.83
HOXB3-209ENST00000478644 ANAPC11Q9NYG5 84 aa3.62□□□□□ -1.83
HOXB3-209ENST00000478644 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
HOXB3-209ENST00000478644 SLC25A34Q6PIV7 304 aa3.61□□□□□ -1.83
HOXB3-209ENST00000478644 Q6ZRX8 168 aa3.61□□□□□ -1.83
HOXB3-209ENST00000478644 MUSTN1Q8IVN3 82 aa3.61□□□□□ -1.83
HOXB3-209ENST00000478644 LPAP08519 4548 aa3.6□□□□□ -1.83
HOXB3-209ENST00000478644 LINC00483Q53H64 154 aa3.6□□□□□ -1.83
HOXB3-209ENST00000478644 Q9BRP9 147 aa3.6□□□□□ -1.83
HOXB3-209ENST00000478644 TRBV7-6A0A0J9YX20 115 aa3.59□□□□□ -1.83
HOXB3-209ENST00000478644 DLEU1O43261 78 aa3.59□□□□□ -1.83
HOXB3-209ENST00000478644 SLC25A20O43772 301 aa3.59□□□□□ -1.83
HOXB3-209ENST00000478644 ERC2-IT1O76042 136 aa3.59□□□□□ -1.83
HOXB3-209ENST00000478644 LINC00313P59037 77 aa3.59□□□□□ -1.83
HOXB3-209ENST00000478644 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
HOXB3-209ENST00000478644 C8orf17Q9NRJ1 99 aa3.59□□□□□ -1.83
HOXB3-209ENST00000478644 MUC2Q02817 5179 aa3.58□□□□□ -1.84
HOXB3-209ENST00000478644 TRAV13-2A0A0B4J235 113 aa3.58□□□□□ -1.84
HOXB3-209ENST00000478644 BPY2O14599 106 aa3.58□□□□□ -1.84
HOXB3-209ENST00000478644 COX8AP10176 69 aa3.58□□□□□ -1.84
HOXB3-209ENST00000478644 RPS28P62857 69 aaKnown RBP3.58□□□□□ -1.84
HOXB3-209ENST00000478644 COX7BP24311 80 aa3.57□□□□□ -1.84
HOXB3-209ENST00000478644 ELOF1P60002 83 aaKnown RBP3.57□□□□□ -1.84
HOXB3-209ENST00000478644 CEND1Q8N111 149 aa3.57□□□□□ -1.84
HOXB3-209ENST00000478644 C3orf22Q8N5N4 141 aa3.57□□□□□ -1.84
HOXB3-209ENST00000478644 A0A1B0GVX0 72 aa3.56□□□□□ -1.84
HOXB3-209ENST00000478644 SPRR1BP22528 89 aa3.56□□□□□ -1.84
HOXB3-209ENST00000478644 ASB16-AS1Q495Z4 193 aa3.56□□□□□ -1.84
HOXB3-209ENST00000478644 RETNLBQ9BQ08 111 aa3.56□□□□□ -1.84
HOXB3-209ENST00000478644 LIMD2Q9BT23 127 aa3.56□□□□□ -1.84
HOXB3-209ENST00000478644 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
HOXB3-209ENST00000478644 HIGD1BQ9P298 99 aa3.56□□□□□ -1.84
HOXB3-209ENST00000478644 SPATA45Q537H7 98 aa3.55□□□□□ -1.84
HOXB3-209ENST00000478644 ST20-AS1Q8NBB2 130 aa3.55□□□□□ -1.84
HOXB3-209ENST00000478644 C14orf144Q96I85 54 aa3.55□□□□□ -1.84
HOXB3-209ENST00000478644 VAMP8Q9BV40 100 aa3.55□□□□□ -1.84
HOXB3-209ENST00000478644 KRTAP13-3Q3SY46 172 aa3.54□□□□□ -1.84
HOXB3-209ENST00000478644 PYY3Q5JQD4 70 aa3.54□□□□□ -1.84
HOXB3-209ENST00000478644 SMIM11BQ8TCY0 68 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms