RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 CRPP02741 224 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 COX6CP09669 75 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 SPINK8P0C7L1 97 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 IGHV3-30-3P0DP02 117 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 IGHV3-30-5P0DP03 117 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 POLR2KP53803 58 aaKnown RBP1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 WFDC2Q14508 124 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 MIAQ16674 131 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 ETDBQ3ZM63 59 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 Q6ZSA8 131 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 Q8N814 137 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 SCGB3A1Q96QR1 104 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 PRO1854Q9UHT4 67 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 DNAH8Q96JB1 4490 aa1.89□□□□□ -2.11
CDC42BPA-212ENST00000478573 TRBV7-7A0A0K0K1E9 115 aa1.88□□□□□ -2.11
CDC42BPA-212ENST00000478573 TRBV10-2A0A0K0K1G8 114 aa1.88□□□□□ -2.11
CDC42BPA-212ENST00000478573 IGIPA6NJ69 53 aa1.88□□□□□ -2.11
CDC42BPA-212ENST00000478573 ZNF815PA8K554 130 aa1.88□□□□□ -2.11
CDC42BPA-212ENST00000478573 M0QY20 66 aa1.88□□□□□ -2.11
CDC42BPA-212ENST00000478573 LECT2O14960 151 aa1.88□□□□□ -2.11
CDC42BPA-212ENST00000478573 LEPROTO15243 131 aa1.88□□□□□ -2.11
CDC42BPA-212ENST00000478573 MGPP08493 103 aa1.88□□□□□ -2.11
CDC42BPA-212ENST00000478573 ATXN8Q156A1 80 aa1.88□□□□□ -2.11
CDC42BPA-212ENST00000478573 TMEM170BQ5T4T1 132 aa1.88□□□□□ -2.11
CDC42BPA-212ENST00000478573 SCGB1D4Q6XE38 83 aa1.88□□□□□ -2.11
CDC42BPA-212ENST00000478573 RAB37Q96AX2 223 aa1.88□□□□□ -2.11
CDC42BPA-212ENST00000478573 CARD19Q96LW7 228 aa1.88□□□□□ -2.11
CDC42BPA-212ENST00000478573 HIGD2AQ9BW72 106 aa1.88□□□□□ -2.11
CDC42BPA-212ENST00000478573 IGLV10-54A0A075B6I4 117 aa1.87□□□□□ -2.11
CDC42BPA-212ENST00000478573 J3QQQ9 107 aa1.87□□□□□ -2.11
CDC42BPA-212ENST00000478573 SNCGO76070 127 aa1.87□□□□□ -2.11
CDC42BPA-212ENST00000478573 ANGP03950 147 aaKnown RBP1.87□□□□□ -2.11
CDC42BPA-212ENST00000478573 ZNF22P17026 224 aaPredicted RBP1.87□□□□□ -2.11
CDC42BPA-212ENST00000478573 RPS28P62857 69 aaKnown RBP1.87□□□□□ -2.11
CDC42BPA-212ENST00000478573 Q5VSD8 79 aa1.87□□□□□ -2.11
CDC42BPA-212ENST00000478573 SDIM1Q6ZPB5 146 aa1.87□□□□□ -2.11
CDC42BPA-212ENST00000478573 ANKRD29Q8N6D5 301 aa1.87□□□□□ -2.11
CDC42BPA-212ENST00000478573 TIMM21Q9BVV7 248 aa1.87□□□□□ -2.11
CDC42BPA-212ENST00000478573 PKIGQ9Y2B9 76 aa1.87□□□□□ -2.11
CDC42BPA-212ENST00000478573 A0A1B0GX51 115 aa1.86□□□□□ -2.11
CDC42BPA-212ENST00000478573 UBE2L6O14933 153 aa1.86□□□□□ -2.11
CDC42BPA-212ENST00000478573 SLC25A20O43772 301 aa1.86□□□□□ -2.11
CDC42BPA-212ENST00000478573 BCE1O60756 84 aa1.86□□□□□ -2.11
CDC42BPA-212ENST00000478573 TCL1BO95988 128 aa1.86□□□□□ -2.11
CDC42BPA-212ENST00000478573 CNBPP62633 177 aaKnown RBP1.86□□□□□ -2.11
CDC42BPA-212ENST00000478573 MRPS36P82909 103 aaKnown RBP1.86□□□□□ -2.11
CDC42BPA-212ENST00000478573 KRTAP26-1Q6PEX3 210 aa1.86□□□□□ -2.11
CDC42BPA-212ENST00000478573 SFTA2Q6UW10 78 aa1.86□□□□□ -2.11
CDC42BPA-212ENST00000478573 ENHOQ6UWT2 76 aa1.86□□□□□ -2.11
CDC42BPA-212ENST00000478573 KRTAP13-1Q8IUC0 172 aa1.86□□□□□ -2.11
CDC42BPA-212ENST00000478573 DAND5Q8N907 189 aa1.86□□□□□ -2.11
CDC42BPA-212ENST00000478573 AMELXQ99217 191 aa1.86□□□□□ -2.11
CDC42BPA-212ENST00000478573 KIAA1109Q2LD37 5005 aa1.86□□□□□ -2.11
CDC42BPA-212ENST00000478573 LOC107984156A0A0G2JMH3 177 aa1.85□□□□□ -2.11
CDC42BPA-212ENST00000478573 TINCRA0A1B0GVN0 87 aa1.85□□□□□ -2.11
CDC42BPA-212ENST00000478573 A0A1W2PNM2 257 aa1.85□□□□□ -2.11
CDC42BPA-212ENST00000478573 I3L3M4 83 aa1.85□□□□□ -2.11
CDC42BPA-212ENST00000478573 K7ERJ3 54 aa1.85□□□□□ -2.11
CDC42BPA-212ENST00000478573 LST1O00453 97 aa1.85□□□□□ -2.11
CDC42BPA-212ENST00000478573 UQCRQO14949 82 aa1.85□□□□□ -2.11
CDC42BPA-212ENST00000478573 TRACP01848 142 aa1.85□□□□□ -2.11
CDC42BPA-212ENST00000478573 MT-ATP8P03928 68 aa1.85□□□□□ -2.11
CDC42BPA-212ENST00000478573 CIRBPQ14011 172 aaKnown RBP1.85□□□□□ -2.11
CDC42BPA-212ENST00000478573 C2orf82Q6UX34 121 aa1.85□□□□□ -2.11
CDC42BPA-212ENST00000478573 LINC00643Q86TS7 51 aa1.85□□□□□ -2.11
CDC42BPA-212ENST00000478573 ARL17AQ8IVW1 177 aa1.85□□□□□ -2.11
CDC42BPA-212ENST00000478573 C9orf163Q8N9P6 203 aa1.85□□□□□ -2.11
CDC42BPA-212ENST00000478573 DMBT1Q9UGM3 2413 aaPredicted RBP1.85□□□□□ -2.11
CDC42BPA-212ENST00000478573 FLG2Q5D862 2391 aaPredicted RBP1.84□□□□□ -2.11
CDC42BPA-212ENST00000478573 IGHV3-64A0A075B6Q5 118 aa1.84□□□□□ -2.11
CDC42BPA-212ENST00000478573 GVQW2A0A096LPI5 108 aaPredicted RBP1.84□□□□□ -2.11
CDC42BPA-212ENST00000478573 IGHV1-58A0A0C4DH39 117 aa1.84□□□□□ -2.11
CDC42BPA-212ENST00000478573 C9JAW5 83 aa1.84□□□□□ -2.11
CDC42BPA-212ENST00000478573 FUSP35637 526 aaKnown RBP eCLIP1.84□□□□□ -2.11
CDC42BPA-212ENST00000478573 HERVK_113P63121 156 aa1.84□□□□□ -2.11
CDC42BPA-212ENST00000478573 CLPSL2Q6UWE3 100 aa1.84□□□□□ -2.11
CDC42BPA-212ENST00000478573 SCXQ7RTU7 201 aa1.84□□□□□ -2.11
CDC42BPA-212ENST00000478573 LINC00269Q8N2A0 174 aa1.84□□□□□ -2.11
CDC42BPA-212ENST00000478573 RPL39LQ96EH5 51 aaKnown RBP1.84□□□□□ -2.11
CDC42BPA-212ENST00000478573 LINC00526Q96FQ7 95 aa1.84□□□□□ -2.11
CDC42BPA-212ENST00000478573 NAA38Q9BRA0 125 aaKnown RBP1.84□□□□□ -2.11
CDC42BPA-212ENST00000478573 TTTY13Q9BZ97 58 aa1.84□□□□□ -2.11
CDC42BPA-212ENST00000478573 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.83□□□□□ -2.12
CDC42BPA-212ENST00000478573 TRBV10-3A0A0K0K1G6 114 aa1.83□□□□□ -2.12
CDC42BPA-212ENST00000478573 IGKV2-29A2NJV5 120 aaPredicted RBP1.83□□□□□ -2.12
CDC42BPA-212ENST00000478573 H0YGX0 51 aa1.83□□□□□ -2.12
CDC42BPA-212ENST00000478573 ATOX1O00244 68 aa1.83□□□□□ -2.12
CDC42BPA-212ENST00000478573 COX7A2LO14548 114 aa1.83□□□□□ -2.12
CDC42BPA-212ENST00000478573 NDUFA1O15239 70 aa1.83□□□□□ -2.12
CDC42BPA-212ENST00000478573 CRYGAP11844 174 aa1.83□□□□□ -2.12
CDC42BPA-212ENST00000478573 S100A7L2Q5SY68 101 aa1.83□□□□□ -2.12
CDC42BPA-212ENST00000478573 ATP5EP2Q5VTU8 51 aa1.83□□□□□ -2.12
CDC42BPA-212ENST00000478573 Q6ZRU5 148 aa1.83□□□□□ -2.12
CDC42BPA-212ENST00000478573 C5orf38Q86SI9 138 aa1.83□□□□□ -2.12
CDC42BPA-212ENST00000478573 SPACA4Q8TDM5 124 aa1.83□□□□□ -2.12
CDC42BPA-212ENST00000478573 DEFB104AQ8WTQ1 72 aa1.83□□□□□ -2.12
CDC42BPA-212ENST00000478573 TRAV13-2A0A0B4J235 113 aa1.82□□□□□ -2.12
CDC42BPA-212ENST00000478573 LINC00959A0A1B0GUT2 108 aa1.82□□□□□ -2.12
CDC42BPA-212ENST00000478573 RPL28P46779 137 aaKnown RBP1.82□□□□□ -2.12
CDC42BPA-212ENST00000478573 KRTAP10-4P60372 401 aaPredicted RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms