RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 B5MCH6 92 aa5.64□□□□□ -1.51
SMARCB1-206ENST00000477836 KRTAP4-16G5E9R7 235 aaPredicted RBP5.64□□□□□ -1.51
SMARCB1-206ENST00000477836 SNCGO76070 127 aa5.64□□□□□ -1.51
SMARCB1-206ENST00000477836 DNAL4O96015 105 aa5.64□□□□□ -1.51
SMARCB1-206ENST00000477836 TYMSOSQ8TAI1 123 aa5.64□□□□□ -1.51
SMARCB1-206ENST00000477836 FAM218AQ96MZ4 157 aa5.64□□□□□ -1.51
SMARCB1-206ENST00000477836 KRTAP4-1Q9BYQ7 146 aa5.64□□□□□ -1.51
SMARCB1-206ENST00000477836 A0A1B0GX51 115 aa5.63□□□□□ -1.51
SMARCB1-206ENST00000477836 TRACP01848 142 aa5.63□□□□□ -1.51
SMARCB1-206ENST00000477836 UBE2AP49459 152 aa5.63□□□□□ -1.51
SMARCB1-206ENST00000477836 PRLHP81277 87 aa5.63□□□□□ -1.51
SMARCB1-206ENST00000477836 LINC00575Q6W349 94 aa5.63□□□□□ -1.51
SMARCB1-206ENST00000477836 A0A087X002 238 aa5.62□□□□□ -1.51
SMARCB1-206ENST00000477836 H3BMG7 143 aa5.62□□□□□ -1.51
SMARCB1-206ENST00000477836 DHRS4-AS1Q9P1J3 65 aa5.62□□□□□ -1.51
SMARCB1-206ENST00000477836 hADV29S1A0JD25 119 aa5.61□□□□□ -1.51
SMARCB1-206ENST00000477836 USH2AO75445 5202 aa5.6□□□□□ -1.51
SMARCB1-206ENST00000477836 C9JAW5 83 aa5.6□□□□□ -1.51
SMARCB1-206ENST00000477836 UBE2V1Q13404 147 aa5.6□□□□□ -1.51
SMARCB1-206ENST00000477836 ASB16-AS1Q495Z4 193 aa5.6□□□□□ -1.51
SMARCB1-206ENST00000477836 Q9BRP9 147 aa5.6□□□□□ -1.51
SMARCB1-206ENST00000477836 HIGD2AQ9BW72 106 aa5.6□□□□□ -1.51
SMARCB1-206ENST00000477836 SSPOA2VEC9 5147 aa5.6□□□□□ -1.51
SMARCB1-206ENST00000477836 LCE2CQ5TA81 110 aa5.59□□□□□ -1.51
SMARCB1-206ENST00000477836 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.59□□□□□ -1.51
SMARCB1-206ENST00000477836 Q6ZQY7 126 aa5.59□□□□□ -1.51
SMARCB1-206ENST00000477836 KRTAP13-1Q8IUC0 172 aa5.59□□□□□ -1.51
SMARCB1-206ENST00000477836 MTURNQ8N3F0 131 aa5.59□□□□□ -1.51
SMARCB1-206ENST00000477836 SMCR5Q8TEV8 140 aa5.59□□□□□ -1.51
SMARCB1-206ENST00000477836 MT1HP80294 61 aa5.58□□□□□ -1.52
SMARCB1-206ENST00000477836 ORMDL1Q9P0S3 153 aa5.58□□□□□ -1.52
SMARCB1-206ENST00000477836 H3BT86 120 aa5.57□□□□□ -1.52
SMARCB1-206ENST00000477836 ZNF861PO60384 105 aa5.57□□□□□ -1.52
SMARCB1-206ENST00000477836 GHRHP01286 108 aa5.57□□□□□ -1.52
SMARCB1-206ENST00000477836 LORP23490 312 aaPredicted RBP5.57□□□□□ -1.52
SMARCB1-206ENST00000477836 OCIAD2Q56VL3 154 aa5.56□□□□□ -1.52
SMARCB1-206ENST00000477836 PRO0461Q9UI25 63 aa5.56□□□□□ -1.52
SMARCB1-206ENST00000477836 F8W1H4 67 aa5.55□□□□□ -1.52
SMARCB1-206ENST00000477836 H3BQ85 93 aa5.55□□□□□ -1.52
SMARCB1-206ENST00000477836 ERC2-IT1O76042 136 aa5.55□□□□□ -1.52
SMARCB1-206ENST00000477836 KRTAP10-6P60371 365 aaPredicted RBP5.55□□□□□ -1.52
SMARCB1-206ENST00000477836 LINC00304Q8N9R0 145 aa5.55□□□□□ -1.52
SMARCB1-206ENST00000477836 ZNF706Q9Y5V0 76 aaPredicted RBP5.55□□□□□ -1.52
SMARCB1-206ENST00000477836 SYNE2Q8WXH0 6885 aaKnown RBP5.54□□□□□ -1.52
SMARCB1-206ENST00000477836 BAALC-AS2P0C853 105 aa5.54□□□□□ -1.52
SMARCB1-206ENST00000477836 SEC61BP60468 96 aaKnown RBP5.54□□□□□ -1.52
SMARCB1-206ENST00000477836 ANKRD29Q8N6D5 301 aa5.54□□□□□ -1.52
SMARCB1-206ENST00000477836 ST20-AS1Q8NBB2 130 aa5.54□□□□□ -1.52
SMARCB1-206ENST00000477836 PPDPFLQ8WWR9 84 aa5.54□□□□□ -1.52
SMARCB1-206ENST00000477836 ANAPC11Q9NYG5 84 aa5.54□□□□□ -1.52
SMARCB1-206ENST00000477836 IGLV5-48A0A075B6I7 105 aa5.53□□□□□ -1.52
SMARCB1-206ENST00000477836 TMEM256-PLSCR3K7ERE1 68 aa5.53□□□□□ -1.52
SMARCB1-206ENST00000477836 KRTAP13-2Q52LG2 175 aa5.53□□□□□ -1.52
SMARCB1-206ENST00000477836 DEFB105AQ8NG35 78 aa5.53□□□□□ -1.52
SMARCB1-206ENST00000477836 SMCPP49901 116 aaPredicted RBP5.52□□□□□ -1.53
SMARCB1-206ENST00000477836 FCGBPQ9Y6R7 5405 aaPredicted RBP5.52□□□□□ -1.53
SMARCB1-206ENST00000477836 TEX49A0A1B0GTD5 131 aa5.51□□□□□ -1.53
SMARCB1-206ENST00000477836 SPRR4Q96PI1 79 aa5.51□□□□□ -1.53
SMARCB1-206ENST00000477836 KRTAP19-2Q3LHN2 52 aa5.5□□□□□ -1.53
SMARCB1-206ENST00000477836 GAGE2AQ6NT46 116 aa5.5□□□□□ -1.53
SMARCB1-206ENST00000477836 Q8N377 158 aa5.5□□□□□ -1.53
SMARCB1-206ENST00000477836 LAMTOR3Q9UHA4 124 aa5.5□□□□□ -1.53
SMARCB1-206ENST00000477836 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
SMARCB1-206ENST00000477836 A0A1B0GV72 72 aa5.49□□□□□ -1.53
SMARCB1-206ENST00000477836 F8WEM9 126 aa5.49□□□□□ -1.53
SMARCB1-206ENST00000477836 KRTAP13-3Q3SY46 172 aa5.49□□□□□ -1.53
SMARCB1-206ENST00000477836 TEN1Q86WV5 123 aa5.49□□□□□ -1.53
SMARCB1-206ENST00000477836 JMJD7-PLA2G4BH0Y9G9 81 aa5.48□□□□□ -1.53
SMARCB1-206ENST00000477836 SPRR1BP22528 89 aa5.48□□□□□ -1.53
SMARCB1-206ENST00000477836 NDUFV3P56181 108 aaKnown RBP5.48□□□□□ -1.53
SMARCB1-206ENST00000477836 ETDBQ3ZM63 59 aa5.48□□□□□ -1.53
SMARCB1-206ENST00000477836 LINC00483Q53H64 154 aa5.48□□□□□ -1.53
SMARCB1-206ENST00000477836 C3orf22Q8N5N4 141 aa5.48□□□□□ -1.53
SMARCB1-206ENST00000477836 FP248Q71RG6 208 aaPredicted RBP5.47□□□□□ -1.53
SMARCB1-206ENST00000477836 M0R2T5 61 aa5.46□□□□□ -1.54
SMARCB1-206ENST00000477836 FLGP20930 4061 aaPredicted RBP5.46□□□□□ -1.54
SMARCB1-206ENST00000477836 SMIM29Q86T20 159 aa5.45□□□□□ -1.54
SMARCB1-206ENST00000477836 RBM3P98179 157 aaKnown RBP5.44□□□□□ -1.54
SMARCB1-206ENST00000477836 FAM229BQ4G0N7 80 aa5.44□□□□□ -1.54
SMARCB1-206ENST00000477836 C9orf153Q5TBE3 101 aa5.44□□□□□ -1.54
SMARCB1-206ENST00000477836 OBSCN-AS1Q96MR7 158 aa5.44□□□□□ -1.54
SMARCB1-206ENST00000477836 DSCR8Q96T75 97 aa5.44□□□□□ -1.54
SMARCB1-206ENST00000477836 C14orf132Q9NPU4 83 aa5.44□□□□□ -1.54
SMARCB1-206ENST00000477836 IGLV9-49A0A0B4J1Y8 123 aa5.43□□□□□ -1.54
SMARCB1-206ENST00000477836 LOC110117498A0A087WWA1 95 aa5.42□□□□□ -1.54
SMARCB1-206ENST00000477836 MOBPQ13875 183 aa5.42□□□□□ -1.54
SMARCB1-206ENST00000477836 Q8NBF4 154 aa5.42□□□□□ -1.54
SMARCB1-206ENST00000477836 IGLV8-61A0A075B6I0 122 aa5.41□□□□□ -1.54
SMARCB1-206ENST00000477836 PDE6GP18545 87 aa5.41□□□□□ -1.54
SMARCB1-206ENST00000477836 C21orf62-AS1Q17RA5 79 aa5.41□□□□□ -1.54
SMARCB1-206ENST00000477836 Q6JHZ5 121 aa5.41□□□□□ -1.54
SMARCB1-206ENST00000477836 TRBV7-4A0A0J9YYF1 115 aa5.4□□□□□ -1.54
SMARCB1-206ENST00000477836 J3QR89 54 aa5.4□□□□□ -1.54
SMARCB1-206ENST00000477836 Q6ZQT0 140 aa5.39□□□□□ -1.55
SMARCB1-206ENST00000477836 CCKP06307 115 aa5.38□□□□□ -1.55
SMARCB1-206ENST00000477836 XP32Q5T750 250 aa5.38□□□□□ -1.55
SMARCB1-206ENST00000477836 SPAG11AQ6PDA7 123 aa5.38□□□□□ -1.55
SMARCB1-206ENST00000477836 IGFL1Q6UW32 110 aa5.38□□□□□ -1.55
SMARCB1-206ENST00000477836 VPS25Q9BRG1 176 aa5.38□□□□□ -1.55
SMARCB1-206ENST00000477836 K7ERU9 68 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms