RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 CRYGAP11844 174 aa10.33□□□□□ -0.76
PTPN7-209ENST00000477554 ZNF706Q9Y5V0 76 aaPredicted RBP10.33□□□□□ -0.76
PTPN7-209ENST00000477554 GHRHP01286 108 aa10.32□□□□□ -0.76
PTPN7-209ENST00000477554 OCIAD2Q56VL3 154 aa10.32□□□□□ -0.76
PTPN7-209ENST00000477554 Q6ZQY7 126 aa10.32□□□□□ -0.76
PTPN7-209ENST00000477554 C3orf22Q8N5N4 141 aa10.32□□□□□ -0.76
PTPN7-209ENST00000477554 TYMSOSQ8TAI1 123 aa10.32□□□□□ -0.76
PTPN7-209ENST00000477554 H3BQ85 93 aa10.29□□□□□ -0.76
PTPN7-209ENST00000477554 GTF2H5Q6ZYL4 71 aa10.29□□□□□ -0.76
PTPN7-209ENST00000477554 K7EP34 96 aa10.28□□□□□ -0.76
PTPN7-209ENST00000477554 ST20-AS1Q8NBB2 130 aa10.28□□□□□ -0.76
PTPN7-209ENST00000477554 ORMDL1Q9P0S3 153 aa10.28□□□□□ -0.76
PTPN7-209ENST00000477554 SPRR4Q96PI1 79 aa10.27□□□□□ -0.77
PTPN7-209ENST00000477554 IGLV5-48A0A075B6I7 105 aa10.26□□□□□ -0.77
PTPN7-209ENST00000477554 H3BMG7 143 aa10.26□□□□□ -0.77
PTPN7-209ENST00000477554 FAM229BQ4G0N7 80 aa10.26□□□□□ -0.77
PTPN7-209ENST00000477554 PPDPFLQ8WWR9 84 aa10.26□□□□□ -0.77
PTPN7-209ENST00000477554 TEX49A0A1B0GTD5 131 aa10.25□□□□□ -0.77
PTPN7-209ENST00000477554 DEFB105AQ8NG35 78 aa10.25□□□□□ -0.77
PTPN7-209ENST00000477554 GAGE2AQ6NT46 116 aa10.24□□□□□ -0.77
PTPN7-209ENST00000477554 TMEM256-PLSCR3K7ERE1 68 aa10.24□□□□□ -0.77
PTPN7-209ENST00000477554 LINC01547P58512 204 aaPredicted RBP10.24□□□□□ -0.77
PTPN7-209ENST00000477554 C9JAW5 83 aa10.23□□□□□ -0.77
PTPN7-209ENST00000477554 SPRR1BP22528 89 aa10.23□□□□□ -0.77
PTPN7-209ENST00000477554 PRR4Q16378 134 aa10.23□□□□□ -0.77
PTPN7-209ENST00000477554 LINC00483Q53H64 154 aa10.23□□□□□ -0.77
PTPN7-209ENST00000477554 RETNLBQ9BQ08 111 aa10.23□□□□□ -0.77
PTPN7-209ENST00000477554 A0A1B0GV90 55 aa10.22□□□□□ -0.77
PTPN7-209ENST00000477554 Q8N377 158 aa10.22□□□□□ -0.77
PTPN7-209ENST00000477554 BAALC-AS2P0C853 105 aa10.21□□□□□ -0.78
PTPN7-209ENST00000477554 LINC00304Q8N9R0 145 aa10.2□□□□□ -0.78
PTPN7-209ENST00000477554 H3BT86 120 aa10.18□□□□□ -0.78
PTPN7-209ENST00000477554 LAMTOR3Q9UHA4 124 aa10.18□□□□□ -0.78
PTPN7-209ENST00000477554 UBE2V1Q13404 147 aa10.17□□□□□ -0.78
PTPN7-209ENST00000477554 F8WEM9 126 aa10.15□□□□□ -0.79
PTPN7-209ENST00000477554 SMIM29Q86T20 159 aa10.15□□□□□ -0.79
PTPN7-209ENST00000477554 MTURNQ8N3F0 131 aa10.15□□□□□ -0.79
PTPN7-209ENST00000477554 ANKRD29Q8N6D5 301 aa10.15□□□□□ -0.79
PTPN7-209ENST00000477554 F8W1H4 67 aa10.14□□□□□ -0.79
PTPN7-209ENST00000477554 NDUFV3P56181 108 aaKnown RBP10.14□□□□□ -0.79
PTPN7-209ENST00000477554 Q8NBF4 154 aa10.12□□□□□ -0.79
PTPN7-209ENST00000477554 PRO0461Q9UI25 63 aa10.12□□□□□ -0.79
PTPN7-209ENST00000477554 MUC2Q02817 5179 aa10.12□□□□□ -0.79
PTPN7-209ENST00000477554 IGLV9-49A0A0B4J1Y8 123 aa10.11□□□□□ -0.79
PTPN7-209ENST00000477554 C9orf153Q5TBE3 101 aa10.09□□□□□ -0.79
PTPN7-209ENST00000477554 SMCPP49901 116 aaPredicted RBP10.08□□□□□ -0.8
PTPN7-209ENST00000477554 MOBPQ13875 183 aa10.08□□□□□ -0.8
PTPN7-209ENST00000477554 JMJD7-PLA2G4BH0Y9G9 81 aa10.07□□□□□ -0.8
PTPN7-209ENST00000477554 IGLV8-61A0A075B6I0 122 aa10.07□□□□□ -0.8
PTPN7-209ENST00000477554 SSBP3-AS1Q7Z2R9 100 aa10.07□□□□□ -0.8
PTPN7-209ENST00000477554 RBM3P98179 157 aaKnown RBP10.06□□□□□ -0.8
PTPN7-209ENST00000477554 Q6JHZ5 121 aa10.05□□□□□ -0.8
PTPN7-209ENST00000477554 MUC17Q685J3 4493 aa10.03□□□□□ -0.8
PTPN7-209ENST00000477554 A0A1B0GV72 72 aa10.02□□□□□ -0.81
PTPN7-209ENST00000477554 OBSCN-AS1Q96MR7 158 aa10.02□□□□□ -0.81
PTPN7-209ENST00000477554 DSCR8Q96T75 97 aa10.02□□□□□ -0.81
PTPN7-209ENST00000477554 TEN1Q86WV5 123 aa9.99□□□□□ -0.81
PTPN7-209ENST00000477554 IGLV7-46A0A075B6I9 117 aa9.99□□□□□ -0.81
PTPN7-209ENST00000477554 ETDBQ3ZM63 59 aa9.99□□□□□ -0.81
PTPN7-209ENST00000477554 SPAG11AQ6PDA7 123 aa9.99□□□□□ -0.81
PTPN7-209ENST00000477554 IGFL1Q6UW32 110 aa9.99□□□□□ -0.81
PTPN7-209ENST00000477554 TRBV7-4A0A0J9YYF1 115 aa9.98□□□□□ -0.81
PTPN7-209ENST00000477554 PDE6GP18545 87 aa9.98□□□□□ -0.81
PTPN7-209ENST00000477554 C21orf62-AS1Q17RA5 79 aa9.97□□□□□ -0.81
PTPN7-209ENST00000477554 C14orf132Q9NPU4 83 aa9.97□□□□□ -0.81
PTPN7-209ENST00000477554 C4orf48Q5BLP8 95 aa9.96□□□□□ -0.82
PTPN7-209ENST00000477554 LOC110117498A0A087WWA1 95 aa9.95□□□□□ -0.82
PTPN7-209ENST00000477554 SPINK1P00995 79 aa9.93□□□□□ -0.82
PTPN7-209ENST00000477554 CD164Q04900 197 aa9.93□□□□□ -0.82
PTPN7-209ENST00000477554 A0A0G2JQZ4 141 aa9.92□□□□□ -0.82
PTPN7-209ENST00000477554 CCKP06307 115 aa9.92□□□□□ -0.82
PTPN7-209ENST00000477554 TPRXLQ17RH7 258 aa9.92□□□□□ -0.82
PTPN7-209ENST00000477554 Q6ZQT0 140 aa9.92□□□□□ -0.82
PTPN7-209ENST00000477554 Q6Q795 121 aa9.91□□□□□ -0.82
PTPN7-209ENST00000477554 HRCT1Q6UXD1 115 aa9.91□□□□□ -0.82
PTPN7-209ENST00000477554 A0A1W2PNM2 257 aa9.89□□□□□ -0.83
PTPN7-209ENST00000477554 VPS25Q9BRG1 176 aa9.89□□□□□ -0.83
PTPN7-209ENST00000477554 KRTAP13-3Q3SY46 172 aa9.88□□□□□ -0.83
PTPN7-209ENST00000477554 CDIP1Q9H305 208 aa9.88□□□□□ -0.83
PTPN7-209ENST00000477554 A0A1B0GW54 56 aa9.87□□□□□ -0.83
PTPN7-209ENST00000477554 TRBV7-7A0A0K0K1E9 115 aa9.86□□□□□ -0.83
PTPN7-209ENST00000477554 RPS29P62273 56 aaKnown RBP9.85□□□□□ -0.83
PTPN7-209ENST00000477554 FP248Q71RG6 208 aaPredicted RBP9.85□□□□□ -0.83
PTPN7-209ENST00000477554 LIMD2Q9BT23 127 aa9.83□□□□□ -0.84
PTPN7-209ENST00000477554 A0A087WSZ3 146 aa9.81□□□□□ -0.84
PTPN7-209ENST00000477554 SS18L2Q9UHA2 77 aa9.81□□□□□ -0.84
PTPN7-209ENST00000477554 Q5XG85 94 aa9.8□□□□□ -0.84
PTPN7-209ENST00000477554 FAT4Q6V0I7 4981 aa9.79□□□□□ -0.84
PTPN7-209ENST00000477554 J3QR89 54 aa9.77□□□□□ -0.85
PTPN7-209ENST00000477554 KRTAP4-1Q9BYQ7 146 aa9.75□□□□□ -0.85
PTPN7-209ENST00000477554 ACYP1P07311 99 aa9.74□□□□□ -0.85
PTPN7-209ENST00000477554 ASB16-AS1Q495Z4 193 aa9.74□□□□□ -0.85
PTPN7-209ENST00000477554 FAM240AA0A1B0GVK7 77 aa9.73□□□□□ -0.85
PTPN7-209ENST00000477554 NREPQ16612 68 aa9.71□□□□□ -0.86
PTPN7-209ENST00000477554 XP32Q5T750 250 aa9.7□□□□□ -0.86
PTPN7-209ENST00000477554 UBL5Q9BZL1 73 aa9.69□□□□□ -0.86
PTPN7-209ENST00000477554 LINC00846Q9NV44 126 aa9.69□□□□□ -0.86
PTPN7-209ENST00000477554 C9orf92A6NGG3 77 aa9.67□□□□□ -0.86
PTPN7-209ENST00000477554 K7ERU9 68 aa9.67□□□□□ -0.86
PTPN7-209ENST00000477554 C1orf195Q5TG92 126 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms