RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 CEND1Q8N111 149 aa8.68□□□□□ -1.02
CLDN11-204ENST00000477531 LINC01547P58512 204 aaPredicted RBP8.67□□□□□ -1.02
CLDN11-204ENST00000477531 VAMP3Q15836 100 aa8.67□□□□□ -1.02
CLDN11-204ENST00000477531 SMIM11BQ8TCY0 68 aa8.67□□□□□ -1.02
CLDN11-204ENST00000477531 IGLV5-48A0A075B6I7 105 aa8.66□□□□□ -1.02
CLDN11-204ENST00000477531 SMIM29Q86T20 159 aa8.65□□□□□ -1.02
CLDN11-204ENST00000477531 A0A0B4J2C4 111 aa8.63□□□□□ -1.03
CLDN11-204ENST00000477531 C9orf92A6NGG3 77 aa8.63□□□□□ -1.03
CLDN11-204ENST00000477531 KRTAP9-2Q9BYQ4 174 aa8.63□□□□□ -1.03
CLDN11-204ENST00000477531 FXYD2P54710 66 aa8.62□□□□□ -1.03
CLDN11-204ENST00000477531 Q5XG85 94 aa8.62□□□□□ -1.03
CLDN11-204ENST00000477531 RAB37Q96AX2 223 aa8.62□□□□□ -1.03
CLDN11-204ENST00000477531 KRTAP4-1Q9BYQ7 146 aa8.62□□□□□ -1.03
CLDN11-204ENST00000477531 F8WEM9 126 aa8.61□□□□□ -1.03
CLDN11-204ENST00000477531 M0R143 59 aa8.6□□□□□ -1.03
CLDN11-204ENST00000477531 CFC1BP0CG36 223 aa8.6□□□□□ -1.03
CLDN11-204ENST00000477531 CFC1P0CG37 223 aa8.6□□□□□ -1.03
CLDN11-204ENST00000477531 TCL1BO95988 128 aa8.58□□□□□ -1.04
CLDN11-204ENST00000477531 LINC00575Q6W349 94 aa8.58□□□□□ -1.04
CLDN11-204ENST00000477531 hADV29S1A0JD25 119 aa8.57□□□□□ -1.04
CLDN11-204ENST00000477531 PCOTHQ58A44 107 aa8.57□□□□□ -1.04
CLDN11-204ENST00000477531 BVES-AS1Q5T3Y7 98 aa8.57□□□□□ -1.04
CLDN11-204ENST00000477531 C1orf195Q5TG92 126 aa8.57□□□□□ -1.04
CLDN11-204ENST00000477531 A0A0G2JQZ4 141 aa8.56□□□□□ -1.04
CLDN11-204ENST00000477531 PRO1854Q9UHT4 67 aa8.56□□□□□ -1.04
CLDN11-204ENST00000477531 IGLV8-61A0A075B6I0 122 aa8.54□□□□□ -1.04
CLDN11-204ENST00000477531 Q6ZQY7 126 aa8.54□□□□□ -1.04
CLDN11-204ENST00000477531 Q6JHZ5 121 aa8.53□□□□□ -1.04
CLDN11-204ENST00000477531 K7ERJ3 54 aa8.5□□□□□ -1.05
CLDN11-204ENST00000477531 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.5□□□□□ -1.05
CLDN11-204ENST00000477531 SNCGO76070 127 aa8.48□□□□□ -1.05
CLDN11-204ENST00000477531 OCIAD2Q56VL3 154 aa8.48□□□□□ -1.05
CLDN11-204ENST00000477531 PPDPFLQ8WWR9 84 aa8.48□□□□□ -1.05
CLDN11-204ENST00000477531 CLEC2BQ92478 149 aa8.48□□□□□ -1.05
CLDN11-204ENST00000477531 SNHG12Q9BXW3 62 aa8.48□□□□□ -1.05
CLDN11-204ENST00000477531 H0YGX0 51 aa8.46□□□□□ -1.06
CLDN11-204ENST00000477531 BATFQ16520 125 aa8.46□□□□□ -1.06
CLDN11-204ENST00000477531 IGFL1Q6UW32 110 aa8.46□□□□□ -1.06
CLDN11-204ENST00000477531 TRBV7-7A0A0K0K1E9 115 aa8.45□□□□□ -1.06
CLDN11-204ENST00000477531 COX6CP09669 75 aa8.45□□□□□ -1.06
CLDN11-204ENST00000477531 PSMB2P49721 201 aa8.45□□□□□ -1.06
CLDN11-204ENST00000477531 RPL37P61927 97 aaKnown RBP8.45□□□□□ -1.06
CLDN11-204ENST00000477531 TRIAP1O43715 76 aa8.43□□□□□ -1.06
CLDN11-204ENST00000477531 A0A1B0GX51 115 aa8.41□□□□□ -1.06
CLDN11-204ENST00000477531 PCP4L1A6NKN8 68 aa8.41□□□□□ -1.06
CLDN11-204ENST00000477531 LCE2CQ5TA81 110 aa8.41□□□□□ -1.06
CLDN11-204ENST00000477531 LST1O00453 97 aa8.39□□□□□ -1.07
CLDN11-204ENST00000477531 H3BUT2 72 aa8.38□□□□□ -1.07
CLDN11-204ENST00000477531 GHRHP01286 108 aa8.38□□□□□ -1.07
CLDN11-204ENST00000477531 SCGB1C2P0DMR2 95 aa8.38□□□□□ -1.07
CLDN11-204ENST00000477531 LYRM7Q5U5X0 104 aa8.38□□□□□ -1.07
CLDN11-204ENST00000477531 KRTAP9-6A0A140TA67 174 aa8.37□□□□□ -1.07
CLDN11-204ENST00000477531 KRTAP19-2Q3LHN2 52 aa8.37□□□□□ -1.07
CLDN11-204ENST00000477531 FAM218AQ96MZ4 157 aa8.36□□□□□ -1.07
CLDN11-204ENST00000477531 SS18L2Q9UHA2 77 aa8.36□□□□□ -1.07
CLDN11-204ENST00000477531 DNAL4O96015 105 aa8.35□□□□□ -1.07
CLDN11-204ENST00000477531 MT1HP80294 61 aa8.35□□□□□ -1.07
CLDN11-204ENST00000477531 COX6B2Q6YFQ2 88 aa8.35□□□□□ -1.07
CLDN11-204ENST00000477531 OBSCN-AS1Q96MR7 158 aa8.35□□□□□ -1.07
CLDN11-204ENST00000477531 COL5A1-AS1Q5SY13 56 aa8.34□□□□□ -1.07
CLDN11-204ENST00000477531 LCE2DQ5TA82 110 aaPredicted RBP8.34□□□□□ -1.07
CLDN11-204ENST00000477531 C9orf118A6NHY6 69 aa8.33□□□□□ -1.08
CLDN11-204ENST00000477531 TAX1BP3O14907 124 aa8.33□□□□□ -1.08
CLDN11-204ENST00000477531 NDUFV3P56181 108 aaKnown RBP8.33□□□□□ -1.08
CLDN11-204ENST00000477531 ATP11AUNQ6ZP68 121 aa8.33□□□□□ -1.08
CLDN11-204ENST00000477531 Q6Q795 121 aa8.32□□□□□ -1.08
CLDN11-204ENST00000477531 TEN1Q86WV5 123 aa8.32□□□□□ -1.08
CLDN11-204ENST00000477531 NAA38Q9BRA0 125 aaKnown RBP8.32□□□□□ -1.08
CLDN11-204ENST00000477531 H3BQ85 93 aa8.31□□□□□ -1.08
CLDN11-204ENST00000477531 TRACP01848 142 aa8.31□□□□□ -1.08
CLDN11-204ENST00000477531 Q75L30 129 aa8.31□□□□□ -1.08
CLDN11-204ENST00000477531 H3BMG7 143 aa8.3□□□□□ -1.08
CLDN11-204ENST00000477531 FABP2P12104 132 aa8.3□□□□□ -1.08
CLDN11-204ENST00000477531 ATXN8Q156A1 80 aa8.3□□□□□ -1.08
CLDN11-204ENST00000477531 TRBV20-1A0A075B6N2 111 aa8.29□□□□□ -1.08
CLDN11-204ENST00000477531 M0R2T5 61 aa8.29□□□□□ -1.08
CLDN11-204ENST00000477531 ORMDL1Q9P0S3 153 aa8.29□□□□□ -1.08
CLDN11-204ENST00000477531 Q96NJ1 140 aa8.28□□□□□ -1.08
CLDN11-204ENST00000477531 A0A1W2PPM0 123 aa8.27□□□□□ -1.09
CLDN11-204ENST00000477531 A0A087WSZ3 146 aa8.26□□□□□ -1.09
CLDN11-204ENST00000477531 TMEM256-PLSCR3K7ERE1 68 aa8.24□□□□□ -1.09
CLDN11-204ENST00000477531 KRTAP10-6P60371 365 aaPredicted RBP8.21□□□□□ -1.1
CLDN11-204ENST00000477531 UBE2V1Q13404 147 aa8.2□□□□□ -1.1
CLDN11-204ENST00000477531 ANKRD29Q8N6D5 301 aa8.2□□□□□ -1.1
CLDN11-204ENST00000477531 SPCS1Q9Y6A9 102 aa8.2□□□□□ -1.1
CLDN11-204ENST00000477531 LORP23490 312 aaPredicted RBP8.19□□□□□ -1.1
CLDN11-204ENST00000477531 C20orf166-AS1Q96NR2 134 aa8.19□□□□□ -1.1
CLDN11-204ENST00000477531 FLGP20930 4061 aaPredicted RBP8.19□□□□□ -1.1
CLDN11-204ENST00000477531 A0A1W2PNM2 257 aa8.18□□□□□ -1.1
CLDN11-204ENST00000477531 BAALC-AS2P0C853 105 aa8.18□□□□□ -1.1
CLDN11-204ENST00000477531 SIGMAR1Q99720 223 aa8.18□□□□□ -1.1
CLDN11-204ENST00000477531 A8MUU9 505 aa8.17□□□□□ -1.1
CLDN11-204ENST00000477531 C9JAW5 83 aa8.17□□□□□ -1.1
CLDN11-204ENST00000477531 CRCT1Q9UGL9 99 aa8.16□□□□□ -1.1
CLDN11-204ENST00000477531 TRBV7-4A0A0J9YYF1 115 aa8.15□□□□□ -1.1
CLDN11-204ENST00000477531 A0A1B0GV72 72 aa8.15□□□□□ -1.1
CLDN11-204ENST00000477531 DSCR10P59022 87 aa8.15□□□□□ -1.1
CLDN11-204ENST00000477531 H3BT86 120 aa8.14□□□□□ -1.11
CLDN11-204ENST00000477531 K7EP34 96 aa8.14□□□□□ -1.11
CLDN11-204ENST00000477531 GTF2H5Q6ZYL4 71 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms