RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 ZNF702PQ9H963 129 aa3.12□□□□□ -1.91
PTCD3-212ENST00000477520 LINC01558Q9Y6Z2 57 aa3.12□□□□□ -1.91
PTCD3-212ENST00000477520 STAB1Q9NY15 2570 aa3.12□□□□□ -1.91
PTCD3-212ENST00000477520 C3orf84H3BNL1 204 aa3.11□□□□□ -1.91
PTCD3-212ENST00000477520 M0R2N4 97 aa3.11□□□□□ -1.91
PTCD3-212ENST00000477520 HTN1P15515 57 aa3.11□□□□□ -1.91
PTCD3-212ENST00000477520 DEFB131AP59861 70 aa3.11□□□□□ -1.91
PTCD3-212ENST00000477520 CASC2Q6XLA1 102 aa3.11□□□□□ -1.91
PTCD3-212ENST00000477520 SCXQ7RTU7 201 aa3.11□□□□□ -1.91
PTCD3-212ENST00000477520 SMIM29Q86T20 159 aa3.11□□□□□ -1.91
PTCD3-212ENST00000477520 PRR15LQ9BU68 103 aa3.11□□□□□ -1.91
PTCD3-212ENST00000477520 ANK3Q12955 4377 aaKnown RBP3.11□□□□□ -1.91
PTCD3-212ENST00000477520 TRGV1A0A0A0MS02 117 aa3.1□□□□□ -1.91
PTCD3-212ENST00000477520 TRGV4A0A0C4DH28 118 aa3.1□□□□□ -1.91
PTCD3-212ENST00000477520 CNBPP62633 177 aaKnown RBP3.1□□□□□ -1.91
PTCD3-212ENST00000477520 KRTAP24-1Q3LI83 254 aa3.1□□□□□ -1.91
PTCD3-212ENST00000477520 LINC01554Q52M75 96 aa3.1□□□□□ -1.91
PTCD3-212ENST00000477520 SPRR4Q96PI1 79 aa3.1□□□□□ -1.91
PTCD3-212ENST00000477520 WFDC10AQ9H1F0 79 aa3.1□□□□□ -1.91
PTCD3-212ENST00000477520 LRCOL1A6NCL2 159 aa3.09□□□□□ -1.91
PTCD3-212ENST00000477520 KRTAP21-3Q3LHN1 58 aa3.09□□□□□ -1.91
PTCD3-212ENST00000477520 SORL1Q92673 2214 aa3.08□□□□□ -1.92
PTCD3-212ENST00000477520 IGLV7-46A0A075B6I9 117 aa3.08□□□□□ -1.92
PTCD3-212ENST00000477520 SPAG11BQ08648 103 aa3.08□□□□□ -1.92
PTCD3-212ENST00000477520 KPRPQ5T749 579 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-212ENST00000477520 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
PTCD3-212ENST00000477520 C4orf3Q8WVX3 66 aa3.08□□□□□ -1.92
PTCD3-212ENST00000477520 PLAC8Q9NZF1 115 aa3.08□□□□□ -1.92
PTCD3-212ENST00000477520 DHRS4-AS1Q9P1J3 65 aa3.08□□□□□ -1.92
PTCD3-212ENST00000477520 TENM1Q9UKZ4 2725 aa3.08□□□□□ -1.92
PTCD3-212ENST00000477520 ZFHX3Q15911 3703 aa3.07□□□□□ -1.92
PTCD3-212ENST00000477520 MOBPQ13875 183 aa3.07□□□□□ -1.92
PTCD3-212ENST00000477520 C10orf99Q6UWK7 81 aa3.07□□□□□ -1.92
PTCD3-212ENST00000477520 Q8NBF4 154 aa3.07□□□□□ -1.92
PTCD3-212ENST00000477520 MAP6D1Q9H9H5 199 aa3.07□□□□□ -1.92
PTCD3-212ENST00000477520 FBN1P35555 2871 aaKnown RBP3.07□□□□□ -1.92
PTCD3-212ENST00000477520 IGKV3OR2-268A0A0C4DH90 116 aa3.06□□□□□ -1.92
PTCD3-212ENST00000477520 PRR3P79522 188 aaKnown RBP3.06□□□□□ -1.92
PTCD3-212ENST00000477520 SVEP1Q4LDE5 3571 aa3.06□□□□□ -1.92
PTCD3-212ENST00000477520 LINC00612Q8N6U2 182 aa3.06□□□□□ -1.92
PTCD3-212ENST00000477520 RPL37AP8A6NKH3 93 aa3.05□□□□□ -1.92
PTCD3-212ENST00000477520 KRTAP10-3P60369 221 aa3.05□□□□□ -1.92
PTCD3-212ENST00000477520 EGFEM1PQ0D2K5 195 aa3.05□□□□□ -1.92
PTCD3-212ENST00000477520 ODF3L2Q3SX64 289 aa3.05□□□□□ -1.92
PTCD3-212ENST00000477520 SERTAD4-AS1Q5TG53 156 aa3.05□□□□□ -1.92
PTCD3-212ENST00000477520 Q8N9L7 120 aa3.05□□□□□ -1.92
PTCD3-212ENST00000477520 C9orf163Q8N9P6 203 aa3.05□□□□□ -1.92
PTCD3-212ENST00000477520 CHCHD10Q8WYQ3 142 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-212ENST00000477520 RETNLBQ9BQ08 111 aa3.05□□□□□ -1.92
PTCD3-212ENST00000477520 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
PTCD3-212ENST00000477520 TP53AIP1Q9HCN2 124 aa3.05□□□□□ -1.92
PTCD3-212ENST00000477520 KLK12Q9UKR0 248 aa3.05□□□□□ -1.92
PTCD3-212ENST00000477520 MGAM2Q2M2H8 2515 aa3.05□□□□□ -1.92
PTCD3-212ENST00000477520 H0Y9P7 68 aa3.04□□□□□ -1.92
PTCD3-212ENST00000477520 DSCR10P59022 87 aa3.04□□□□□ -1.92
PTCD3-212ENST00000477520 DEFB136Q30KP8 78 aa3.04□□□□□ -1.92
PTCD3-212ENST00000477520 COA5Q86WW8 74 aa3.04□□□□□ -1.92
PTCD3-212ENST00000477520 PRR26Q8N8Z3 221 aa3.04□□□□□ -1.92
PTCD3-212ENST00000477520 NOP10Q9NPE3 64 aaKnown RBP3.04□□□□□ -1.92
PTCD3-212ENST00000477520 IGKV2D-24A0A075B6R9 120 aa3.03□□□□□ -1.92
PTCD3-212ENST00000477520 REG3AQ06141 175 aa3.03□□□□□ -1.92
PTCD3-212ENST00000477520 C1orf137Q5JT78 98 aa3.03□□□□□ -1.92
PTCD3-212ENST00000477520 PRO0255Q9UI72 69 aa3.03□□□□□ -1.92
PTCD3-212ENST00000477520 VWFP04275 2813 aa3.03□□□□□ -1.92
PTCD3-212ENST00000477520 NOTCH1P46531 2555 aa3.02□□□□□ -1.93
PTCD3-212ENST00000477520 DEFB131BA0A096LNP1 70 aa3.02□□□□□ -1.93
PTCD3-212ENST00000477520 A0A1W2PNM2 257 aa3.02□□□□□ -1.93
PTCD3-212ENST00000477520 LINC00313P59037 77 aa3.02□□□□□ -1.93
PTCD3-212ENST00000477520 Q8N377 158 aa3.02□□□□□ -1.93
PTCD3-212ENST00000477520 Q8NAQ8 132 aa3.02□□□□□ -1.93
PTCD3-212ENST00000477520 ST20-AS1Q8NBB2 130 aa3.02□□□□□ -1.93
PTCD3-212ENST00000477520 PKD1L1Q8TDX9 2849 aa3.01□□□□□ -1.93
PTCD3-212ENST00000477520 H0Y9J4 135 aa3.01□□□□□ -1.93
PTCD3-212ENST00000477520 K7EQZ3 153 aa3.01□□□□□ -1.93
PTCD3-212ENST00000477520 UNQ6190/PRO20217Q6UXQ8 127 aa3.01□□□□□ -1.93
PTCD3-212ENST00000477520 NBEAL1Q6ZS30 2694 aa3.01□□□□□ -1.93
PTCD3-212ENST00000477520 IGLV8-61A0A075B6I0 122 aa3□□□□□ -1.93
PTCD3-212ENST00000477520 A8MU10 97 aa3□□□□□ -1.93
PTCD3-212ENST00000477520 IGLV1-51P01701 117 aa3□□□□□ -1.93
PTCD3-212ENST00000477520 ANGP03950 147 aaKnown RBP3□□□□□ -1.93
PTCD3-212ENST00000477520 PRR4Q16378 134 aa3□□□□□ -1.93
PTCD3-212ENST00000477520 NOTCH2NLQ7Z3S9 236 aa3□□□□□ -1.93
PTCD3-212ENST00000477520 Q8NDZ9 215 aa3□□□□□ -1.93
PTCD3-212ENST00000477520 PRR34Q9NV39 138 aa3□□□□□ -1.93
PTCD3-212ENST00000477520 LELP1Q5T871 98 aa2.99□□□□□ -1.93
PTCD3-212ENST00000477520 Q6ZRX8 168 aa2.99□□□□□ -1.93
PTCD3-212ENST00000477520 CSNK1G2-AS1Q8NCQ2 148 aa2.99□□□□□ -1.93
PTCD3-212ENST00000477520 CUBNO60494 3623 aa2.99□□□□□ -1.93
PTCD3-212ENST00000477520 IGLV5-37A0A075B6J1 123 aa2.98□□□□□ -1.93
PTCD3-212ENST00000477520 A8MWP4 228 aa2.98□□□□□ -1.93
PTCD3-212ENST00000477520 RTL8CO15255 209 aa2.98□□□□□ -1.93
PTCD3-212ENST00000477520 SPRR1AP35321 89 aa2.98□□□□□ -1.93
PTCD3-212ENST00000477520 SPAG11AQ6PDA7 123 aa2.98□□□□□ -1.93
PTCD3-212ENST00000477520 SPATA8Q6RVD6 105 aa2.98□□□□□ -1.93
PTCD3-212ENST00000477520 XAGE1AQ9HD64 81 aa2.98□□□□□ -1.93
PTCD3-212ENST00000477520 C6orf48Q9UBA6 75 aa2.98□□□□□ -1.93
PTCD3-212ENST00000477520 CAMK2N2Q96S95 79 aa2.97□□□□□ -1.93
PTCD3-212ENST00000477520 TLX1NBP0CAT3 122 aa2.96□□□□□ -1.94
PTCD3-212ENST00000477520 ACYP2P14621 99 aa2.96□□□□□ -1.94
PTCD3-212ENST00000477520 Q6ZR54 194 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms