RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 YPEL4Q96NS1 127 aa3.44□□□□□ -1.86
RTFDC1-206ENST00000477485 KRTAP4-8Q9BYQ9 185 aa3.44□□□□□ -1.86
RTFDC1-206ENST00000477485 TTTY13Q9BZ97 58 aa3.44□□□□□ -1.86
RTFDC1-206ENST00000477485 Q75L30 129 aa3.43□□□□□ -1.86
RTFDC1-206ENST00000477485 COPS9Q8WXC6 57 aa3.43□□□□□ -1.86
RTFDC1-206ENST00000477485 KRTAP9-8Q9BYQ0 159 aa3.43□□□□□ -1.86
RTFDC1-206ENST00000477485 KRTAP3-1Q9BYR8 98 aa3.43□□□□□ -1.86
RTFDC1-206ENST00000477485 TRBV7-7A0A0K0K1E9 115 aa3.42□□□□□ -1.86
RTFDC1-206ENST00000477485 A4D1N5 150 aa3.42□□□□□ -1.86
RTFDC1-206ENST00000477485 SYS1-DBNDD2H3BUS1 97 aa3.42□□□□□ -1.86
RTFDC1-206ENST00000477485 CLEC2BQ92478 149 aa3.42□□□□□ -1.86
RTFDC1-206ENST00000477485 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
RTFDC1-206ENST00000477485 LST1O00453 97 aa3.41□□□□□ -1.86
RTFDC1-206ENST00000477485 VAMP3Q15836 100 aa3.4□□□□□ -1.87
RTFDC1-206ENST00000477485 Q6JHZ5 121 aa3.4□□□□□ -1.87
RTFDC1-206ENST00000477485 IGFL1Q6UW32 110 aa3.4□□□□□ -1.87
RTFDC1-206ENST00000477485 SMIM11BQ8TCY0 68 aa3.4□□□□□ -1.87
RTFDC1-206ENST00000477485 TRAV13-2A0A0B4J235 113 aa3.39□□□□□ -1.87
RTFDC1-206ENST00000477485 MT2AP02795 61 aa3.39□□□□□ -1.87
RTFDC1-206ENST00000477485 IFITM1P13164 125 aa3.39□□□□□ -1.87
RTFDC1-206ENST00000477485 KRTAP10-10P60014 251 aa3.39□□□□□ -1.87
RTFDC1-206ENST00000477485 Q6ZQY7 126 aa3.39□□□□□ -1.87
RTFDC1-206ENST00000477485 MUSTN1Q8IVN3 82 aa3.39□□□□□ -1.87
RTFDC1-206ENST00000477485 hADV29S1A0JD25 119 aa3.38□□□□□ -1.87
RTFDC1-206ENST00000477485 LINC01545Q5VT33 79 aa3.38□□□□□ -1.87
RTFDC1-206ENST00000477485 SSPOA2VEC9 5147 aa3.37□□□□□ -1.87
RTFDC1-206ENST00000477485 H3BUT2 72 aa3.37□□□□□ -1.87
RTFDC1-206ENST00000477485 KRTDAPP60985 99 aa3.37□□□□□ -1.87
RTFDC1-206ENST00000477485 OCIAD2Q56VL3 154 aa3.37□□□□□ -1.87
RTFDC1-206ENST00000477485 PET117Q6UWS5 81 aa3.37□□□□□ -1.87
RTFDC1-206ENST00000477485 C20orf166-AS1Q96NR2 134 aa3.37□□□□□ -1.87
RTFDC1-206ENST00000477485 SNHG12Q9BXW3 62 aa3.37□□□□□ -1.87
RTFDC1-206ENST00000477485 USH2AO75445 5202 aa3.36□□□□□ -1.87
RTFDC1-206ENST00000477485 MT1FP04733 61 aa3.36□□□□□ -1.87
RTFDC1-206ENST00000477485 DSCR10P59022 87 aa3.36□□□□□ -1.87
RTFDC1-206ENST00000477485 LINC00575Q6W349 94 aa3.36□□□□□ -1.87
RTFDC1-206ENST00000477485 Q6ZVH6 145 aa3.36□□□□□ -1.87
RTFDC1-206ENST00000477485 ATOH7Q8N100 152 aa3.36□□□□□ -1.87
RTFDC1-206ENST00000477485 LINC00846Q9NV44 126 aa3.36□□□□□ -1.87
RTFDC1-206ENST00000477485 RBM12B-AS1Q9P1G2 102 aa3.36□□□□□ -1.87
RTFDC1-206ENST00000477485 SS18L2Q9UHA2 77 aa3.36□□□□□ -1.87
RTFDC1-206ENST00000477485 A8MUU9 505 aa3.35□□□□□ -1.87
RTFDC1-206ENST00000477485 C3orf79P0CE67 100 aa3.35□□□□□ -1.87
RTFDC1-206ENST00000477485 SIGMAR1Q99720 223 aa3.35□□□□□ -1.87
RTFDC1-206ENST00000477485 TRIAP1O43715 76 aa3.34□□□□□ -1.87
RTFDC1-206ENST00000477485 FCGBPQ9Y6R7 5405 aaPredicted RBP3.34□□□□□ -1.87
RTFDC1-206ENST00000477485 COLCA2A8K830 154 aa3.33□□□□□ -1.88
RTFDC1-206ENST00000477485 HIST1H2BKO60814 126 aa3.33□□□□□ -1.88
RTFDC1-206ENST00000477485 SCGB1D1O95968 90 aa3.33□□□□□ -1.88
RTFDC1-206ENST00000477485 HIST1H2BJP06899 126 aa3.33□□□□□ -1.88
RTFDC1-206ENST00000477485 HIST1H2BOP23527 126 aa3.33□□□□□ -1.88
RTFDC1-206ENST00000477485 HIST1H2BBP33778 126 aa3.33□□□□□ -1.88
RTFDC1-206ENST00000477485 HIST1H2BDP58876 126 aa3.33□□□□□ -1.88
RTFDC1-206ENST00000477485 HIST1H2BCP62807 126 aa3.33□□□□□ -1.88
RTFDC1-206ENST00000477485 HIST2H2BEQ16778 126 aa3.33□□□□□ -1.88
RTFDC1-206ENST00000477485 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.33□□□□□ -1.88
RTFDC1-206ENST00000477485 LCE4AQ5TA78 99 aa3.33□□□□□ -1.88
RTFDC1-206ENST00000477485 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.33□□□□□ -1.88
RTFDC1-206ENST00000477485 HIST1H2BHQ93079 126 aa3.33□□□□□ -1.88
RTFDC1-206ENST00000477485 HIST1H2BNQ99877 126 aa3.33□□□□□ -1.88
RTFDC1-206ENST00000477485 HIST1H2BMQ99879 126 aa3.33□□□□□ -1.88
RTFDC1-206ENST00000477485 A0A087WSZ3 146 aa3.32□□□□□ -1.88
RTFDC1-206ENST00000477485 C12orf57Q99622 126 aa3.32□□□□□ -1.88
RTFDC1-206ENST00000477485 KRTAP9-3Q9BYQ3 159 aa3.32□□□□□ -1.88
RTFDC1-206ENST00000477485 BVES-AS1Q5T3Y7 98 aa3.31□□□□□ -1.88
RTFDC1-206ENST00000477485 TEN1Q86WV5 123 aa3.31□□□□□ -1.88
RTFDC1-206ENST00000477485 PPDPFLQ8WWR9 84 aa3.31□□□□□ -1.88
RTFDC1-206ENST00000477485 LINC00313P59037 77 aa3.3□□□□□ -1.88
RTFDC1-206ENST00000477485 MTURNQ8N3F0 131 aa3.3□□□□□ -1.88
RTFDC1-206ENST00000477485 KRTAP16-1A8MUX0 517 aa3.29□□□□□ -1.88
RTFDC1-206ENST00000477485 SNCGO76070 127 aa3.29□□□□□ -1.88
RTFDC1-206ENST00000477485 IGKV4-1P06312 121 aa3.29□□□□□ -1.88
RTFDC1-206ENST00000477485 HRES1P13985 223 aa3.29□□□□□ -1.88
RTFDC1-206ENST00000477485 SYNE2Q8WXH0 6885 aaKnown RBP3.28□□□□□ -1.88
RTFDC1-206ENST00000477485 A0A1B0GV72 72 aa3.28□□□□□ -1.88
RTFDC1-206ENST00000477485 NDUFV3P56181 108 aaKnown RBP3.28□□□□□ -1.88
RTFDC1-206ENST00000477485 LCE3BQ5TA77 95 aa3.28□□□□□ -1.88
RTFDC1-206ENST00000477485 IGHV6-1A0A0B4J1U7 121 aa3.27□□□□□ -1.89
RTFDC1-206ENST00000477485 HSBP1L1C9JCN9 74 aa3.27□□□□□ -1.89
RTFDC1-206ENST00000477485 H3BMG7 143 aa3.27□□□□□ -1.89
RTFDC1-206ENST00000477485 FABP2P12104 132 aa3.27□□□□□ -1.89
RTFDC1-206ENST00000477485 DEFB116Q30KQ4 102 aa3.27□□□□□ -1.89
RTFDC1-206ENST00000477485 KRTAP19-6Q3LI70 58 aa3.27□□□□□ -1.89
RTFDC1-206ENST00000477485 MACF1Q9UPN3 7388 aaKnown RBP3.26□□□□□ -1.89
RTFDC1-206ENST00000477485 HIST1H4GQ99525 98 aa3.26□□□□□ -1.89
RTFDC1-206ENST00000477485 SNRPEP62304 92 aaKnown RBP3.25□□□□□ -1.89
RTFDC1-206ENST00000477485 NOTCH2NLQ7Z3S9 236 aa3.25□□□□□ -1.89
RTFDC1-206ENST00000477485 Q8N9P0 234 aaPredicted RBP3.25□□□□□ -1.89
RTFDC1-206ENST00000477485 MPLKIPQ8TAP9 179 aa3.25□□□□□ -1.89
RTFDC1-206ENST00000477485 RAB37Q96AX2 223 aa3.25□□□□□ -1.89
RTFDC1-206ENST00000477485 KRTAP4-8A0A0G2JLE6 195 aa3.23□□□□□ -1.89
RTFDC1-206ENST00000477485 A8MWP4 228 aa3.23□□□□□ -1.89
RTFDC1-206ENST00000477485 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
RTFDC1-206ENST00000477485 FAM218AQ96MZ4 157 aa3.23□□□□□ -1.89
RTFDC1-206ENST00000477485 A0A1W2PNM2 257 aa3.22□□□□□ -1.89
RTFDC1-206ENST00000477485 H0YGX0 51 aa3.22□□□□□ -1.89
RTFDC1-206ENST00000477485 COA6Q5JTJ3 125 aaKnown RBP3.22□□□□□ -1.89
RTFDC1-206ENST00000477485 ANKRD29Q8N6D5 301 aa3.22□□□□□ -1.89
RTFDC1-206ENST00000477485 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
RTFDC1-206ENST00000477485 KRTAP9-4Q9BYQ2 154 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms