RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 KTN1-AS1Q86SY8 53 aa4.16□□□□□ -1.74
TTC3-215ENST00000476784 CHD7Q9P2D1 2997 aa4.15□□□□□ -1.74
TTC3-215ENST00000476784 ATRQ13535 2644 aa4.15□□□□□ -1.75
TTC3-215ENST00000476784 BPTFQ12830 3046 aa4.15□□□□□ -1.75
TTC3-215ENST00000476784 TRANK1O15050 2925 aa4.14□□□□□ -1.75
TTC3-215ENST00000476784 KRTAP10-2P60368 255 aa4.14□□□□□ -1.75
TTC3-215ENST00000476784 MAST4O15021 2626 aa4.14□□□□□ -1.75
TTC3-215ENST00000476784 H7BZZ5 65 aa4.14□□□□□ -1.75
TTC3-215ENST00000476784 CHD9Q3L8U1 2897 aa4.13□□□□□ -1.75
TTC3-215ENST00000476784 CEP295Q9C0D2 2601 aa4.13□□□□□ -1.75
TTC3-215ENST00000476784 VCANP13611 3396 aa4.13□□□□□ -1.75
TTC3-215ENST00000476784 KLKP1Q107X0 134 aa4.13□□□□□ -1.75
TTC3-215ENST00000476784 PRUNE2Q8WUY3 3088 aa4.13□□□□□ -1.75
TTC3-215ENST00000476784 PLAC8Q9NZF1 115 aa4.13□□□□□ -1.75
TTC3-215ENST00000476784 MYO15AQ9UKN7 3530 aa4.13□□□□□ -1.75
TTC3-215ENST00000476784 ADM2Q7Z4H4 148 aa4.12□□□□□ -1.75
TTC3-215ENST00000476784 DMAC1Q96GE9 116 aa4.12□□□□□ -1.75
TTC3-215ENST00000476784 C5orf42Q9H799 3197 aa4.11□□□□□ -1.75
TTC3-215ENST00000476784 LINC01546A6NGU7 62 aa4.1□□□□□ -1.75
TTC3-215ENST00000476784 DNAH14Q0VDD8 3507 aa4.09□□□□□ -1.75
TTC3-215ENST00000476784 SMCPP49901 116 aaPredicted RBP4.09□□□□□ -1.75
TTC3-215ENST00000476784 DMDP11532 3685 aa4.08□□□□□ -1.76
TTC3-215ENST00000476784 C20orf166-AS1Q96NR2 134 aa4.07□□□□□ -1.76
TTC3-215ENST00000476784 Q8N9P0 234 aaPredicted RBP4.06□□□□□ -1.76
TTC3-215ENST00000476784 STAB1Q9NY15 2570 aa4.06□□□□□ -1.76
TTC3-215ENST00000476784 SPEGQ15772 3267 aa4.06□□□□□ -1.76
TTC3-215ENST00000476784 A0A0C4DFX4 3053 aa4.06□□□□□ -1.76
TTC3-215ENST00000476784 FP248Q71RG6 208 aaPredicted RBP4.06□□□□□ -1.76
TTC3-215ENST00000476784 FRYLO94915 3013 aa4.06□□□□□ -1.76
TTC3-215ENST00000476784 PRO0461Q9UI25 63 aa4.05□□□□□ -1.76
TTC3-215ENST00000476784 CFAP54Q96N23 3096 aa4.05□□□□□ -1.76
TTC3-215ENST00000476784 TNRC18O15417 2968 aaPredicted RBP4.04□□□□□ -1.76
TTC3-215ENST00000476784 CFAP46Q8IYW2 2715 aa4.03□□□□□ -1.76
TTC3-215ENST00000476784 SETXQ7Z333 2677 aaKnown RBP4.03□□□□□ -1.76
TTC3-215ENST00000476784 VPS13AQ96RL7 3174 aa4.03□□□□□ -1.77
TTC3-215ENST00000476784 WDFY3Q8IZQ1 3526 aa4.02□□□□□ -1.77
TTC3-215ENST00000476784 COL6A3P12111 3177 aa4.02□□□□□ -1.77
TTC3-215ENST00000476784 LAMA1P25391 3075 aa4.02□□□□□ -1.77
TTC3-215ENST00000476784 Q5W150 140 aa4.01□□□□□ -1.77
TTC3-215ENST00000476784 DMBT1Q9UGM3 2413 aaPredicted RBP4.01□□□□□ -1.77
TTC3-215ENST00000476784 SPANXA2-OT1Q8N9U9 137 aa4□□□□□ -1.77
TTC3-215ENST00000476784 HELZ2Q9BYK8 2649 aaKnown RBP3.99□□□□□ -1.77
TTC3-215ENST00000476784 RPL37P61927 97 aaKnown RBP3.99□□□□□ -1.77
TTC3-215ENST00000476784 KRTAP1-5Q9BYS1 174 aa3.99□□□□□ -1.77
TTC3-215ENST00000476784 SPRR1BP22528 89 aa3.98□□□□□ -1.77
TTC3-215ENST00000476784 A0A1B0GVY2 172 aa3.98□□□□□ -1.77
TTC3-215ENST00000476784 A8MUU9 505 aa3.97□□□□□ -1.77
TTC3-215ENST00000476784 KLK9Q2XQG4 91 aa3.96□□□□□ -1.77
TTC3-215ENST00000476784 WDFY4Q6ZS81 3184 aa3.96□□□□□ -1.78
TTC3-215ENST00000476784 SPATA8Q6RVD6 105 aa3.96□□□□□ -1.78
TTC3-215ENST00000476784 Q8NDZ9 215 aa3.95□□□□□ -1.78
TTC3-215ENST00000476784 ROMO1P60602 79 aa3.94□□□□□ -1.78
TTC3-215ENST00000476784 ITPR3Q14573 2671 aa3.94□□□□□ -1.78
TTC3-215ENST00000476784 MMP24-AS1A0A0U1RRL7 71 aa3.94□□□□□ -1.78
TTC3-215ENST00000476784 KRTAP10-8P60410 259 aa3.94□□□□□ -1.78
TTC3-215ENST00000476784 A0A087X002 238 aa3.92□□□□□ -1.78
TTC3-215ENST00000476784 BAHCC1Q9P281 2608 aa3.9□□□□□ -1.78
TTC3-215ENST00000476784 Q6ZR54 194 aa3.9□□□□□ -1.79
TTC3-215ENST00000476784 FLNAP21333 2647 aaKnown RBP3.9□□□□□ -1.79
TTC3-215ENST00000476784 PRAC1Q96KF2 57 aa3.9□□□□□ -1.79
TTC3-215ENST00000476784 P0C880 135 aa3.9□□□□□ -1.79
TTC3-215ENST00000476784 PANO1I0J062 215 aa3.89□□□□□ -1.79
TTC3-215ENST00000476784 KRTAP10-10P60014 251 aa3.88□□□□□ -1.79
TTC3-215ENST00000476784 ASPMQ8IZT6 3477 aa3.87□□□□□ -1.79
TTC3-215ENST00000476784 STAB2Q8WWQ8 2551 aa3.87□□□□□ -1.79
TTC3-215ENST00000476784 TNP1P09430 55 aa3.87□□□□□ -1.79
TTC3-215ENST00000476784 KRTAP16-1A8MUX0 517 aa3.86□□□□□ -1.79
TTC3-215ENST00000476784 TEP1Q99973 2627 aaKnown RBP3.86□□□□□ -1.79
TTC3-215ENST00000476784 OCR1Q9BZK8 76 aa3.85□□□□□ -1.79
TTC3-215ENST00000476784 TEX15Q9BXT5 2789 aa3.85□□□□□ -1.79
TTC3-215ENST00000476784 C10orf95Q9H7T3 257 aa3.84□□□□□ -1.8
TTC3-215ENST00000476784 LINC00472Q9H8W2 130 aa3.83□□□□□ -1.8
TTC3-215ENST00000476784 ZFHX4Q86UP3 3567 aa3.83□□□□□ -1.8
TTC3-215ENST00000476784 LOC400499M0QZD8 3231 aa3.83□□□□□ -1.8
TTC3-215ENST00000476784 CFAP47Q6ZTR5 3102 aa3.83□□□□□ -1.8
TTC3-215ENST00000476784 NOTCH1P46531 2555 aa3.82□□□□□ -1.8
TTC3-215ENST00000476784 KRTAP26-1Q6PEX3 210 aa3.82□□□□□ -1.8
TTC3-215ENST00000476784 Q75L30 129 aa3.82□□□□□ -1.8
TTC3-215ENST00000476784 NBEAL1Q6ZS30 2694 aa3.82□□□□□ -1.8
TTC3-215ENST00000476784 SPENQ96T58 3664 aaKnown RBP3.82□□□□□ -1.8
TTC3-215ENST00000476784 LINC01558Q9Y6Z2 57 aa3.82□□□□□ -1.8
TTC3-215ENST00000476784 FREM2Q5SZK8 3169 aa3.81□□□□□ -1.8
TTC3-215ENST00000476784 SPRR1AP35321 89 aa3.81□□□□□ -1.8
TTC3-215ENST00000476784 CELSR3Q9NYQ7 3312 aa3.8□□□□□ -1.8
TTC3-215ENST00000476784 LAMA5O15230 3695 aa3.8□□□□□ -1.8
TTC3-215ENST00000476784 KRTAP21-3Q3LHN1 58 aa3.8□□□□□ -1.8
TTC3-215ENST00000476784 PRRC2CQ9Y520 2896 aaKnown RBP3.79□□□□□ -1.8
TTC3-215ENST00000476784 PRO2289Q9P1D8 64 aa3.79□□□□□ -1.8
TTC3-215ENST00000476784 AKAP13Q12802 2813 aa3.78□□□□□ -1.8
TTC3-215ENST00000476784 UNC79Q9P2D8 2635 aa3.78□□□□□ -1.8
TTC3-215ENST00000476784 A8MU10 97 aa3.77□□□□□ -1.81
TTC3-215ENST00000476784 DCHS1Q96JQ0 3298 aa3.76□□□□□ -1.81
TTC3-215ENST00000476784 DMXL1Q9Y485 3027 aa3.75□□□□□ -1.81
TTC3-215ENST00000476784 FRYQ5TBA9 3013 aa3.74□□□□□ -1.81
TTC3-215ENST00000476784 NOTCH2NLQ7Z3S9 236 aa3.72□□□□□ -1.81
TTC3-215ENST00000476784 RPS29P62273 56 aaKnown RBP3.71□□□□□ -1.82
TTC3-215ENST00000476784 COL6A5A8TX70 2615 aa3.7□□□□□ -1.82
TTC3-215ENST00000476784 KMT2BQ9UMN6 2715 aaPredicted RBP3.7□□□□□ -1.82
TTC3-215ENST00000476784 CENPEQ02224 2701 aa3.7□□□□□ -1.82
TTC3-215ENST00000476784 Q5XG85 94 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms