RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 TEN1Q86WV5 123 aa7.84□□□□□ -1.15
HLA-DPA1-246ENST00000476642 TYMSOSQ8TAI1 123 aa7.84□□□□□ -1.15
HLA-DPA1-246ENST00000476642 A0A087X002 238 aa7.83□□□□□ -1.16
HLA-DPA1-246ENST00000476642 ERC2-IT1O76042 136 aa7.83□□□□□ -1.16
HLA-DPA1-246ENST00000476642 Q1RN00 199 aa7.83□□□□□ -1.16
HLA-DPA1-246ENST00000476642 LINC00483Q53H64 154 aa7.83□□□□□ -1.16
HLA-DPA1-246ENST00000476642 GAGE2AQ6NT46 116 aa7.83□□□□□ -1.16
HLA-DPA1-246ENST00000476642 PSMB2P49721 201 aa7.82□□□□□ -1.16
HLA-DPA1-246ENST00000476642 H0YGX0 51 aa7.81□□□□□ -1.16
HLA-DPA1-246ENST00000476642 H7C2G1 150 aa7.81□□□□□ -1.16
HLA-DPA1-246ENST00000476642 TSPAN13O95857 204 aa7.81□□□□□ -1.16
HLA-DPA1-246ENST00000476642 ANAPC11Q9NYG5 84 aa7.81□□□□□ -1.16
HLA-DPA1-246ENST00000476642 LINC00575Q6W349 94 aa7.79□□□□□ -1.16
HLA-DPA1-246ENST00000476642 CDIP1Q9H305 208 aa7.79□□□□□ -1.16
HLA-DPA1-246ENST00000476642 TEX49A0A1B0GTD5 131 aa7.78□□□□□ -1.16
HLA-DPA1-246ENST00000476642 hADV29S1A0JD25 119 aa7.78□□□□□ -1.16
HLA-DPA1-246ENST00000476642 SCGB1C2P0DMR2 95 aa7.78□□□□□ -1.16
HLA-DPA1-246ENST00000476642 SPRR1BP22528 89 aa7.78□□□□□ -1.16
HLA-DPA1-246ENST00000476642 KRTAP13-2Q52LG2 175 aa7.78□□□□□ -1.16
HLA-DPA1-246ENST00000476642 COX6CP09669 75 aa7.77□□□□□ -1.17
HLA-DPA1-246ENST00000476642 SMCPP49901 116 aaPredicted RBP7.77□□□□□ -1.17
HLA-DPA1-246ENST00000476642 ST20-AS1Q8NBB2 130 aa7.77□□□□□ -1.17
HLA-DPA1-246ENST00000476642 LAMTOR3Q9UHA4 124 aa7.77□□□□□ -1.17
HLA-DPA1-246ENST00000476642 GHRHP01286 108 aa7.76□□□□□ -1.17
HLA-DPA1-246ENST00000476642 ATXN8Q156A1 80 aa7.76□□□□□ -1.17
HLA-DPA1-246ENST00000476642 SPAG11AQ6PDA7 123 aa7.76□□□□□ -1.17
HLA-DPA1-246ENST00000476642 SSBP3-AS1Q7Z2R9 100 aa7.76□□□□□ -1.17
HLA-DPA1-246ENST00000476642 IGLV5-48A0A075B6I7 105 aa7.75□□□□□ -1.17
HLA-DPA1-246ENST00000476642 A0A1B0GX51 115 aa7.75□□□□□ -1.17
HLA-DPA1-246ENST00000476642 C4orf48Q5BLP8 95 aa7.75□□□□□ -1.17
HLA-DPA1-246ENST00000476642 Q6Q795 121 aa7.75□□□□□ -1.17
HLA-DPA1-246ENST00000476642 C3orf22Q8N5N4 141 aa7.75□□□□□ -1.17
HLA-DPA1-246ENST00000476642 LINC00304Q8N9R0 145 aa7.75□□□□□ -1.17
HLA-DPA1-246ENST00000476642 DEFB105AQ8NG35 78 aa7.75□□□□□ -1.17
HLA-DPA1-246ENST00000476642 IGLV9-49A0A0B4J1Y8 123 aa7.74□□□□□ -1.17
HLA-DPA1-246ENST00000476642 TCL1BO95988 128 aa7.74□□□□□ -1.17
HLA-DPA1-246ENST00000476642 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.74□□□□□ -1.17
HLA-DPA1-246ENST00000476642 ANAPC13Q9BS18 74 aa7.74□□□□□ -1.17
HLA-DPA1-246ENST00000476642 TNXBP22105 4242 aa7.73□□□□□ -1.17
HLA-DPA1-246ENST00000476642 C9orf153Q5TBE3 101 aa7.73□□□□□ -1.17
HLA-DPA1-246ENST00000476642 ANKRD29Q8N6D5 301 aa7.73□□□□□ -1.17
HLA-DPA1-246ENST00000476642 MT-ATP8P03928 68 aa7.72□□□□□ -1.17
HLA-DPA1-246ENST00000476642 MOBPQ13875 183 aa7.72□□□□□ -1.17
HLA-DPA1-246ENST00000476642 Q6ZQY7 126 aa7.72□□□□□ -1.17
HLA-DPA1-246ENST00000476642 Q8NBF4 154 aa7.72□□□□□ -1.17
HLA-DPA1-246ENST00000476642 TRIAP1O43715 76 aa7.71□□□□□ -1.18
HLA-DPA1-246ENST00000476642 H3BT86 120 aa7.7□□□□□ -1.18
HLA-DPA1-246ENST00000476642 C9JAW5 83 aa7.69□□□□□ -1.18
HLA-DPA1-246ENST00000476642 F8WEM9 126 aa7.69□□□□□ -1.18
HLA-DPA1-246ENST00000476642 LINC01547P58512 204 aaPredicted RBP7.69□□□□□ -1.18
HLA-DPA1-246ENST00000476642 FAM240AA0A1B0GVK7 77 aa7.68□□□□□ -1.18
HLA-DPA1-246ENST00000476642 H3BQ85 93 aa7.68□□□□□ -1.18
HLA-DPA1-246ENST00000476642 DNAL4O96015 105 aa7.68□□□□□ -1.18
HLA-DPA1-246ENST00000476642 SPINK1P00995 79 aa7.68□□□□□ -1.18
HLA-DPA1-246ENST00000476642 Q8N377 158 aa7.68□□□□□ -1.18
HLA-DPA1-246ENST00000476642 RPS29P62273 56 aaKnown RBP7.66□□□□□ -1.18
HLA-DPA1-246ENST00000476642 LRP2P98164 4655 aa7.66□□□□□ -1.18
HLA-DPA1-246ENST00000476642 SMIM29Q86T20 159 aa7.65□□□□□ -1.18
HLA-DPA1-246ENST00000476642 FAM218AQ96MZ4 157 aa7.65□□□□□ -1.18
HLA-DPA1-246ENST00000476642 ACYP1P07311 99 aa7.64□□□□□ -1.19
HLA-DPA1-246ENST00000476642 NDUFV3P56181 108 aaKnown RBP7.64□□□□□ -1.19
HLA-DPA1-246ENST00000476642 CLEC2BQ92478 149 aa7.63□□□□□ -1.19
HLA-DPA1-246ENST00000476642 CD164Q04900 197 aa7.62□□□□□ -1.19
HLA-DPA1-246ENST00000476642 Q6JHZ5 121 aa7.62□□□□□ -1.19
HLA-DPA1-246ENST00000476642 ORMDL1Q9P0S3 153 aa7.62□□□□□ -1.19
HLA-DPA1-246ENST00000476642 RNF213Q63HN8 5207 aa7.61□□□□□ -1.19
HLA-DPA1-246ENST00000476642 TRACP01848 142 aa7.61□□□□□ -1.19
HLA-DPA1-246ENST00000476642 IMUPQ9GZP8 106 aa7.61□□□□□ -1.19
HLA-DPA1-246ENST00000476642 TMEM256-PLSCR3K7ERE1 68 aa7.6□□□□□ -1.19
HLA-DPA1-246ENST00000476642 LIMD2Q9BT23 127 aa7.6□□□□□ -1.19
HLA-DPA1-246ENST00000476642 IGLV8-61A0A075B6I0 122 aa7.59□□□□□ -1.19
HLA-DPA1-246ENST00000476642 LST1O00453 97 aa7.59□□□□□ -1.19
HLA-DPA1-246ENST00000476642 TRBV7-7A0A0K0K1E9 115 aa7.58□□□□□ -1.2
HLA-DPA1-246ENST00000476642 PRR4Q16378 134 aa7.58□□□□□ -1.2
HLA-DPA1-246ENST00000476642 SS18L2Q9UHA2 77 aa7.56□□□□□ -1.2
HLA-DPA1-246ENST00000476642 FP248Q71RG6 208 aaPredicted RBP7.55□□□□□ -1.2
HLA-DPA1-246ENST00000476642 HRCT1Q6UXD1 115 aa7.54□□□□□ -1.2
HLA-DPA1-246ENST00000476642 Q5XG85 94 aa7.53□□□□□ -1.2
HLA-DPA1-246ENST00000476642 IGFL1Q6UW32 110 aa7.52□□□□□ -1.21
HLA-DPA1-246ENST00000476642 RETNLBQ9BQ08 111 aa7.52□□□□□ -1.21
HLA-DPA1-246ENST00000476642 LINC00643Q86TS7 51 aa7.51□□□□□ -1.21
HLA-DPA1-246ENST00000476642 CCDC179H3BU77 68 aa7.5□□□□□ -1.21
HLA-DPA1-246ENST00000476642 BAALC-AS2P0C853 105 aa7.5□□□□□ -1.21
HLA-DPA1-246ENST00000476642 IGLV7-46A0A075B6I9 117 aa7.49□□□□□ -1.21
HLA-DPA1-246ENST00000476642 A0A0G2JQZ4 141 aa7.47□□□□□ -1.21
HLA-DPA1-246ENST00000476642 UQCRQO14949 82 aa7.46□□□□□ -1.22
HLA-DPA1-246ENST00000476642 RBM3P98179 157 aaKnown RBP7.46□□□□□ -1.22
HLA-DPA1-246ENST00000476642 TPRXLQ17RH7 258 aa7.46□□□□□ -1.22
HLA-DPA1-246ENST00000476642 JMJD7-PLA2G4BH0Y9G9 81 aa7.45□□□□□ -1.22
HLA-DPA1-246ENST00000476642 ASB16-AS1Q495Z4 193 aa7.45□□□□□ -1.22
HLA-DPA1-246ENST00000476642 DSCR8Q96T75 97 aa7.45□□□□□ -1.22
HLA-DPA1-246ENST00000476642 FAM236AA0A1B0GUQ0 79 aa7.43□□□□□ -1.22
HLA-DPA1-246ENST00000476642 FAM236BA0A1B0GV22 79 aa7.43□□□□□ -1.22
HLA-DPA1-246ENST00000476642 ATOX1O00244 68 aa7.43□□□□□ -1.22
HLA-DPA1-246ENST00000476642 SMIM20Q8N5G0 67 aa7.43□□□□□ -1.22
HLA-DPA1-246ENST00000476642 TRBV7-4A0A0J9YYF1 115 aa7.42□□□□□ -1.22
HLA-DPA1-246ENST00000476642 A0A0U1RQV1 116 aa7.42□□□□□ -1.22
HLA-DPA1-246ENST00000476642 PDE6GP18545 87 aa7.41□□□□□ -1.22
HLA-DPA1-246ENST00000476642 LPAP08519 4548 aa7.4□□□□□ -1.22
HLA-DPA1-246ENST00000476642 CCKP06307 115 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms