RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 S100A16Q96FQ6 103 aaKnown RBP1.65□□□□□ -2.15
VPS13D-207ENST00000476169 EPPK1P58107 5090 aaKnown RBP1.65□□□□□ -2.15
VPS13D-207ENST00000476169 DNAH11Q96DT5 4516 aa1.65□□□□□ -2.15
VPS13D-207ENST00000476169 PLCE1Q9P212 2302 aa1.65□□□□□ -2.15
VPS13D-207ENST00000476169 DNAH1Q9P2D7 4330 aa1.64□□□□□ -2.15
VPS13D-207ENST00000476169 COL6A5A8TX70 2615 aa1.64□□□□□ -2.15
VPS13D-207ENST00000476169 I3L2K1 104 aa1.64□□□□□ -2.15
VPS13D-207ENST00000476169 ATOX1O00244 68 aa1.64□□□□□ -2.15
VPS13D-207ENST00000476169 KLK9Q2XQG4 91 aa1.64□□□□□ -2.15
VPS13D-207ENST00000476169 DEFB121Q5J5C9 76 aa1.64□□□□□ -2.15
VPS13D-207ENST00000476169 TMEM170BQ5T4T1 132 aa1.64□□□□□ -2.15
VPS13D-207ENST00000476169 SMIM4Q8WVI0 70 aa1.64□□□□□ -2.15
VPS13D-207ENST00000476169 NDUFA4L2Q9NRX3 87 aa1.64□□□□□ -2.15
VPS13D-207ENST00000476169 PRO1854Q9UHT4 67 aa1.64□□□□□ -2.15
VPS13D-207ENST00000476169 CELSR1Q9NYQ6 3014 aa1.64□□□□□ -2.15
VPS13D-207ENST00000476169 MGAM2Q2M2H8 2515 aa1.64□□□□□ -2.15
VPS13D-207ENST00000476169 HERC2O95714 4834 aa1.64□□□□□ -2.15
VPS13D-207ENST00000476169 VPS13CQ709C8 3753 aa1.63□□□□□ -2.15
VPS13D-207ENST00000476169 A0A087WTM6 91 aa1.63□□□□□ -2.15
VPS13D-207ENST00000476169 CTXND1A0A1B0GTU2 59 aa1.63□□□□□ -2.15
VPS13D-207ENST00000476169 H3BUA1 57 aa1.63□□□□□ -2.15
VPS13D-207ENST00000476169 ACYP2P14621 99 aa1.63□□□□□ -2.15
VPS13D-207ENST00000476169 DEFB1P60022 68 aa1.63□□□□□ -2.15
VPS13D-207ENST00000476169 DEFB114Q30KQ6 69 aa1.63□□□□□ -2.15
VPS13D-207ENST00000476169 FAM167A-AS1Q96KT0 104 aa1.63□□□□□ -2.15
VPS13D-207ENST00000476169 ZANQ9Y493 2812 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 CMYA5Q8N3K9 4069 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 TRGV1A0A0A0MS02 117 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 SMIM31A0A1B0GVY4 71 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 FAM223BA6NKX1 122 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 F2Z2F3 143 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 NDUFC1O43677 76 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 SFT2D2O95562 160 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 APOC3P02656 99 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 COX6CP09669 75 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 IGLC1P0CG04 106 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 IAPPP10997 89 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 PRCDQ00LT1 54 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 NMSQ5H8A3 153 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 KRTAP5-2Q701N4 177 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 BAGE3Q86Y29 109 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 FAM223AQ8IWN6 122 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 C9orf62Q8N4C0 152 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 USMG5Q96IX5 58 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 PRO1933Q9H354 126 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 CRYBG3Q68DQ2 2970 aa1.62□□□□□ -2.15
VPS13D-207ENST00000476169 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.61□□□□□ -2.15
VPS13D-207ENST00000476169 TRAV22A0A0B4J277 110 aa1.61□□□□□ -2.15
VPS13D-207ENST00000476169 ANGP03950 147 aaKnown RBP1.61□□□□□ -2.15
VPS13D-207ENST00000476169 ASIPP42127 132 aa1.61□□□□□ -2.15
VPS13D-207ENST00000476169 SPINK13Q1W4C9 94 aa1.61□□□□□ -2.15
VPS13D-207ENST00000476169 TOMM5Q8N4H5 51 aa1.61□□□□□ -2.15
VPS13D-207ENST00000476169 PLAC4Q8WY50 150 aa1.61□□□□□ -2.15
VPS13D-207ENST00000476169 Q96NJ1 140 aa1.61□□□□□ -2.15
VPS13D-207ENST00000476169 RHPN1-AS1Q9BWJ2 59 aa1.61□□□□□ -2.15
VPS13D-207ENST00000476169 TRRAPQ9Y4A5 3859 aa1.61□□□□□ -2.15
VPS13D-207ENST00000476169 DNAH3Q8TD57 4116 aa1.61□□□□□ -2.15
VPS13D-207ENST00000476169 PCLOQ9Y6V0 5065 aa1.61□□□□□ -2.15
VPS13D-207ENST00000476169 DNAH10Q8IVF4 4471 aa1.6□□□□□ -2.15
VPS13D-207ENST00000476169 CEBPZOSA8MTT3 80 aa1.6□□□□□ -2.15
VPS13D-207ENST00000476169 NDUFA4O00483 81 aa1.6□□□□□ -2.15
VPS13D-207ENST00000476169 DEFB4AO15263 64 aa1.6□□□□□ -2.15
VPS13D-207ENST00000476169 LY6G6CO95867 125 aa1.6□□□□□ -2.15
VPS13D-207ENST00000476169 CCL18P55774 89 aa1.6□□□□□ -2.15
VPS13D-207ENST00000476169 DEFB131AP59861 70 aa1.6□□□□□ -2.15
VPS13D-207ENST00000476169 Q5VV11 94 aa1.6□□□□□ -2.15
VPS13D-207ENST00000476169 NPVFQ9HCQ7 196 aa1.6□□□□□ -2.15
VPS13D-207ENST00000476169 MEGF8Q7Z7M0 2845 aa1.6□□□□□ -2.15
VPS13D-207ENST00000476169 HYDINQ4G0P3 5121 aa1.6□□□□□ -2.15
VPS13D-207ENST00000476169 ALMS1Q8TCU4 4167 aa1.59□□□□□ -2.15
VPS13D-207ENST00000476169 VPS13DQ5THJ4 4388 aa1.59□□□□□ -2.15
VPS13D-207ENST00000476169 STARD9Q9P2P6 4700 aa1.59□□□□□ -2.15
VPS13D-207ENST00000476169 F8VRH5 84 aa1.59□□□□□ -2.15
VPS13D-207ENST00000476169 DEFB135Q30KP9 77 aa1.59□□□□□ -2.15
VPS13D-207ENST00000476169 Q5BKY6 102 aa1.59□□□□□ -2.15
VPS13D-207ENST00000476169 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.59□□□□□ -2.15
VPS13D-207ENST00000476169 SERP2Q8N6R1 65 aa1.59□□□□□ -2.15
VPS13D-207ENST00000476169 NBEAL1Q6ZS30 2694 aa1.59□□□□□ -2.16
VPS13D-207ENST00000476169 DNAH17Q9UFH2 4485 aa1.59□□□□□ -2.16
VPS13D-207ENST00000476169 WNK1Q9H4A3 2382 aa1.58□□□□□ -2.16
VPS13D-207ENST00000476169 FAT2Q9NYQ8 4349 aa1.58□□□□□ -2.16
VPS13D-207ENST00000476169 UBE2D3P61077 147 aa1.58□□□□□ -2.16
VPS13D-207ENST00000476169 UBE2D2P62837 147 aa1.58□□□□□ -2.16
VPS13D-207ENST00000476169 PSMG4Q5JS54 123 aa1.58□□□□□ -2.16
VPS13D-207ENST00000476169 BAGE2Q86Y30 109 aa1.58□□□□□ -2.16
VPS13D-207ENST00000476169 TRGV9Q99603 122 aa1.58□□□□□ -2.16
VPS13D-207ENST00000476169 CDC42SE2Q9NRR3 84 aa1.58□□□□□ -2.16
VPS13D-207ENST00000476169 PSENENQ9NZ42 101 aa1.58□□□□□ -2.16
VPS13D-207ENST00000476169 RABAC1Q9UI14 185 aa1.58□□□□□ -2.16
VPS13D-207ENST00000476169 ARL2-SNX15V9GYD0 113 aa1.58□□□□□ -2.16
VPS13D-207ENST00000476169 RYR1P21817 5038 aa1.58□□□□□ -2.16
VPS13D-207ENST00000476169 KIAA1109Q2LD37 5005 aa1.58□□□□□ -2.16
VPS13D-207ENST00000476169 DNAH2Q9P225 4427 aa1.57□□□□□ -2.16
VPS13D-207ENST00000476169 LCE6AA0A183 80 aa1.57□□□□□ -2.16
VPS13D-207ENST00000476169 NXT2Q9NPJ8 142 aaKnown RBP1.57□□□□□ -2.16
VPS13D-207ENST00000476169 CACFD1Q9UGQ2 172 aa1.57□□□□□ -2.16
VPS13D-207ENST00000476169 TENM1Q9UKZ4 2725 aa1.57□□□□□ -2.16
VPS13D-207ENST00000476169 LRP1BQ9NZR2 4599 aa1.57□□□□□ -2.16
VPS13D-207ENST00000476169 M0R3E3 92 aa1.56□□□□□ -2.16
VPS13D-207ENST00000476169 IGLC2P0DOY2 106 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms