RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 LELP1Q5T871 98 aa2.22□□□□□ -2.05
LSM2-211ENST00000475835 UNQ6190/PRO20217Q6UXQ8 127 aa2.22□□□□□ -2.05
LSM2-211ENST00000475835 DEFB4AO15263 64 aa2.21□□□□□ -2.06
LSM2-211ENST00000475835 SPART-AS1P0CW21 52 aa2.21□□□□□ -2.06
LSM2-211ENST00000475835 CREBBPQ92793 2442 aa2.21□□□□□ -2.06
LSM2-211ENST00000475835 BOD1L1Q8NFC6 3051 aa2.21□□□□□ -2.06
LSM2-211ENST00000475835 WDFY4Q6ZS81 3184 aa2.2□□□□□ -2.06
LSM2-211ENST00000475835 SPG11Q96JI7 2443 aa2.2□□□□□ -2.06
LSM2-211ENST00000475835 COX6B2Q6YFQ2 88 aa2.2□□□□□ -2.06
LSM2-211ENST00000475835 KRTAP1-3Q8IUG1 177 aa2.2□□□□□ -2.06
LSM2-211ENST00000475835 WWC2-AS2Q96NR7 200 aa2.2□□□□□ -2.06
LSM2-211ENST00000475835 LOC400499M0QZD8 3231 aa2.2□□□□□ -2.06
LSM2-211ENST00000475835 Q6ZRX8 168 aa2.19□□□□□ -2.06
LSM2-211ENST00000475835 DMXL1Q9Y485 3027 aa2.19□□□□□ -2.06
LSM2-211ENST00000475835 NCOR2Q9Y618 2525 aa2.19□□□□□ -2.06
LSM2-211ENST00000475835 TLN2Q9Y4G6 2542 aa2.18□□□□□ -2.06
LSM2-211ENST00000475835 KRTAP24-1Q3LI83 254 aa2.18□□□□□ -2.06
LSM2-211ENST00000475835 DEFB105AQ8NG35 78 aa2.18□□□□□ -2.06
LSM2-211ENST00000475835 MRPL34Q9BQ48 92 aaKnown RBP2.18□□□□□ -2.06
LSM2-211ENST00000475835 PKD1L2Q7Z442 2459 aa2.18□□□□□ -2.06
LSM2-211ENST00000475835 ATMQ13315 3056 aa2.18□□□□□ -2.06
LSM2-211ENST00000475835 ADGRG4Q8IZF6 3080 aa2.18□□□□□ -2.06
LSM2-211ENST00000475835 MYO9AB2RTY4 2548 aa2.18□□□□□ -2.06
LSM2-211ENST00000475835 C2CD3Q4AC94 2353 aa2.17□□□□□ -2.06
LSM2-211ENST00000475835 SPTBN4Q9H254 2564 aa2.17□□□□□ -2.06
LSM2-211ENST00000475835 LRRK2Q5S007 2527 aa2.17□□□□□ -2.06
LSM2-211ENST00000475835 H0YAA0 97 aa2.17□□□□□ -2.06
LSM2-211ENST00000475835 SPENQ96T58 3664 aaKnown RBP2.16□□□□□ -2.06
LSM2-211ENST00000475835 CHD8Q9HCK8 2581 aa2.16□□□□□ -2.06
LSM2-211ENST00000475835 ZFHX4Q86UP3 3567 aa2.16□□□□□ -2.06
LSM2-211ENST00000475835 JMJD1CQ15652 2540 aa2.16□□□□□ -2.06
LSM2-211ENST00000475835 FAM208BQ5VWN6 2430 aa2.16□□□□□ -2.06
LSM2-211ENST00000475835 SPRR1AP35321 89 aa2.16□□□□□ -2.06
LSM2-211ENST00000475835 KRTAP1-1Q07627 177 aa2.16□□□□□ -2.06
LSM2-211ENST00000475835 IGFL1Q6UW32 110 aa2.16□□□□□ -2.06
LSM2-211ENST00000475835 USP9XQ93008 2570 aaPredicted RBP2.16□□□□□ -2.06
LSM2-211ENST00000475835 NAV2Q8IVL1 2488 aa2.16□□□□□ -2.06
LSM2-211ENST00000475835 DMDP11532 3685 aa2.15□□□□□ -2.06
LSM2-211ENST00000475835 H3BNG1 76 aa2.15□□□□□ -2.07
LSM2-211ENST00000475835 KRTAP10-3P60369 221 aa2.15□□□□□ -2.07
LSM2-211ENST00000475835 KRTAP13-3Q3SY46 172 aa2.15□□□□□ -2.07
LSM2-211ENST00000475835 SETXQ7Z333 2677 aaKnown RBP2.15□□□□□ -2.07
LSM2-211ENST00000475835 CHD6Q8TD26 2715 aa2.15□□□□□ -2.07
LSM2-211ENST00000475835 USP9YO00507 2555 aaPredicted RBP2.14□□□□□ -2.07
LSM2-211ENST00000475835 POLQO75417 2590 aa2.14□□□□□ -2.07
LSM2-211ENST00000475835 ACACBO00763 2458 aa2.14□□□□□ -2.07
LSM2-211ENST00000475835 PTPN13Q12923 2485 aa2.14□□□□□ -2.07
LSM2-211ENST00000475835 ITPR3Q14573 2671 aa2.14□□□□□ -2.07
LSM2-211ENST00000475835 LINC01556Q5JQF7 62 aa2.14□□□□□ -2.07
LSM2-211ENST00000475835 CRIPTQ9P021 101 aa2.14□□□□□ -2.07
LSM2-211ENST00000475835 SONP18583 2426 aaKnown RBP2.14□□□□□ -2.07
LSM2-211ENST00000475835 FN1P02751 2386 aaKnown RBP2.14□□□□□ -2.07
LSM2-211ENST00000475835 MYO18BQ8IUG5 2567 aa2.13□□□□□ -2.07
LSM2-211ENST00000475835 DCHS1Q96JQ0 3298 aa2.13□□□□□ -2.07
LSM2-211ENST00000475835 INE1O15225 51 aa2.13□□□□□ -2.07
LSM2-211ENST00000475835 TPRXLQ17RH7 258 aa2.13□□□□□ -2.07
LSM2-211ENST00000475835 PLAC4Q8WY50 150 aa2.13□□□□□ -2.07
LSM2-211ENST00000475835 EPG5Q9HCE0 2579 aa2.12□□□□□ -2.07
LSM2-211ENST00000475835 SMG1Q96Q15 3661 aaKnown RBP2.12□□□□□ -2.07
LSM2-211ENST00000475835 ITPR1Q14643 2758 aa2.12□□□□□ -2.07
LSM2-211ENST00000475835 FLNAP21333 2647 aaKnown RBP2.12□□□□□ -2.07
LSM2-211ENST00000475835 MAP1AP78559 2803 aaPredicted RBP2.12□□□□□ -2.07
LSM2-211ENST00000475835 Q6ZSA8 131 aa2.12□□□□□ -2.07
LSM2-211ENST00000475835 R4GN34 69 aa2.12□□□□□ -2.07
LSM2-211ENST00000475835 IGSF10Q6WRI0 2623 aa2.12□□□□□ -2.07
LSM2-211ENST00000475835 ABCA12Q86UK0 2595 aa2.11□□□□□ -2.07
LSM2-211ENST00000475835 UTP20O75691 2785 aaKnown RBP2.11□□□□□ -2.07
LSM2-211ENST00000475835 SPRR1BP22528 89 aa2.11□□□□□ -2.07
LSM2-211ENST00000475835 H1FX-AS1Q4G0G2 97 aa2.11□□□□□ -2.07
LSM2-211ENST00000475835 SPACA4Q8TDM5 124 aa2.11□□□□□ -2.07
LSM2-211ENST00000475835 SMR3AQ99954 134 aa2.11□□□□□ -2.07
LSM2-211ENST00000475835 TEX15Q9BXT5 2789 aa2.11□□□□□ -2.07
LSM2-211ENST00000475835 CSMD1Q96PZ7 3565 aa2.11□□□□□ -2.07
LSM2-211ENST00000475835 CACNA1AO00555 2505 aa2.11□□□□□ -2.07
LSM2-211ENST00000475835 ZNF462Q96JM2 2506 aa2.11□□□□□ -2.07
LSM2-211ENST00000475835 FLNCQ14315 2725 aa2.11□□□□□ -2.07
LSM2-211ENST00000475835 BSNQ9UPA5 3926 aa2.1□□□□□ -2.07
LSM2-211ENST00000475835 GCN1Q92616 2671 aaKnown RBP2.1□□□□□ -2.07
LSM2-211ENST00000475835 J3QKU1 62 aa2.1□□□□□ -2.07
LSM2-211ENST00000475835 C14orf177Q52M58 125 aa2.1□□□□□ -2.07
LSM2-211ENST00000475835 CELSR1Q9NYQ6 3014 aa2.1□□□□□ -2.07
LSM2-211ENST00000475835 CCDC168Q8NDH2 2452 aa2.09□□□□□ -2.07
LSM2-211ENST00000475835 PIEZO1Q92508 2521 aa2.09□□□□□ -2.07
LSM2-211ENST00000475835 IGKV2D-30A0A075B6S6 120 aa2.09□□□□□ -2.07
LSM2-211ENST00000475835 IGKV2-30P06310 120 aa2.09□□□□□ -2.07
LSM2-211ENST00000475835 PRLHP81277 87 aa2.09□□□□□ -2.07
LSM2-211ENST00000475835 ZANQ9Y493 2812 aa2.09□□□□□ -2.07
LSM2-211ENST00000475835 HIVEP2P31629 2446 aa2.09□□□□□ -2.08
LSM2-211ENST00000475835 MXRA5Q9NR99 2828 aa2.09□□□□□ -2.08
LSM2-211ENST00000475835 SETD2Q9BYW2 2564 aaPredicted RBP2.08□□□□□ -2.08
LSM2-211ENST00000475835 CFAP46Q8IYW2 2715 aa2.08□□□□□ -2.08
LSM2-211ENST00000475835 UBR5O95071 2799 aaPredicted RBP2.08□□□□□ -2.08
LSM2-211ENST00000475835 ASPMQ8IZT6 3477 aa2.08□□□□□ -2.08
LSM2-211ENST00000475835 RPL37P61927 97 aaKnown RBP2.08□□□□□ -2.08
LSM2-211ENST00000475835 USP24Q9UPU5 2620 aa2.08□□□□□ -2.08
LSM2-211ENST00000475835 ZFYVE26Q68DK2 2539 aa2.07□□□□□ -2.08
LSM2-211ENST00000475835 A0A096LNI7 61 aa2.07□□□□□ -2.08
LSM2-211ENST00000475835 Q6ZRN7 208 aaPredicted RBP2.07□□□□□ -2.08
LSM2-211ENST00000475835 UBE2DNLQ8IWF7 75 aa2.07□□□□□ -2.08
LSM2-211ENST00000475835 TYMSOSQ8TAI1 123 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms