RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 SSPOA2VEC9 5147 aa6.44□□□□□ -1.38
CCDC57-208ENST00000475635 TRBV7-7A0A0K0K1E9 115 aa6.44□□□□□ -1.38
CCDC57-208ENST00000475635 Q75L30 129 aa6.44□□□□□ -1.38
CCDC57-208ENST00000475635 USH2AO75445 5202 aa6.43□□□□□ -1.38
CCDC57-208ENST00000475635 Q6JHZ5 121 aa6.43□□□□□ -1.38
CCDC57-208ENST00000475635 SLC7A5P1Q8MH63 180 aa6.43□□□□□ -1.38
CCDC57-208ENST00000475635 CLEC2BQ92478 149 aa6.43□□□□□ -1.38
CCDC57-208ENST00000475635 IGFL1Q6UW32 110 aa6.42□□□□□ -1.38
CCDC57-208ENST00000475635 C20orf202A1L168 122 aa6.41□□□□□ -1.38
CCDC57-208ENST00000475635 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.41□□□□□ -1.38
CCDC57-208ENST00000475635 VAMP3Q15836 100 aa6.41□□□□□ -1.38
CCDC57-208ENST00000475635 LINC00575Q6W349 94 aa6.41□□□□□ -1.38
CCDC57-208ENST00000475635 Q6ZQY7 126 aa6.41□□□□□ -1.38
CCDC57-208ENST00000475635 ATOH7Q8N100 152 aa6.41□□□□□ -1.38
CCDC57-208ENST00000475635 KRTAP9-7A8MTY7 169 aa6.4□□□□□ -1.38
CCDC57-208ENST00000475635 hADV29S1A0JD25 119 aa6.39□□□□□ -1.39
CCDC57-208ENST00000475635 CFC1P0CG37 223 aa6.39□□□□□ -1.39
CCDC57-208ENST00000475635 OCIAD2Q56VL3 154 aa6.39□□□□□ -1.39
CCDC57-208ENST00000475635 KRTAP9-8Q9BYQ0 159 aa6.38□□□□□ -1.39
CCDC57-208ENST00000475635 Q96NJ1 140 aa6.37□□□□□ -1.39
CCDC57-208ENST00000475635 LST1O00453 97 aa6.36□□□□□ -1.39
CCDC57-208ENST00000475635 COA6Q5JTJ3 125 aaKnown RBP6.36□□□□□ -1.39
CCDC57-208ENST00000475635 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.34□□□□□ -1.39
CCDC57-208ENST00000475635 H3BUT2 72 aa6.33□□□□□ -1.4
CCDC57-208ENST00000475635 PPDPFLQ8WWR9 84 aa6.32□□□□□ -1.4
CCDC57-208ENST00000475635 C20orf166-AS1Q96NR2 134 aa6.32□□□□□ -1.4
CCDC57-208ENST00000475635 SNHG12Q9BXW3 62 aa6.32□□□□□ -1.4
CCDC57-208ENST00000475635 TRBV20-1A0A075B6N2 111 aa6.31□□□□□ -1.4
CCDC57-208ENST00000475635 A8MUU9 505 aa6.31□□□□□ -1.4
CCDC57-208ENST00000475635 SNRPEP62304 92 aaKnown RBP6.31□□□□□ -1.4
CCDC57-208ENST00000475635 FCGBPQ9Y6R7 5405 aaPredicted RBP6.31□□□□□ -1.4
CCDC57-208ENST00000475635 SS18L2Q9UHA2 77 aa6.3□□□□□ -1.4
CCDC57-208ENST00000475635 SCGB1D1O95968 90 aa6.29□□□□□ -1.4
CCDC57-208ENST00000475635 BVES-AS1Q5T3Y7 98 aa6.29□□□□□ -1.4
CCDC57-208ENST00000475635 C12orf57Q99622 126 aa6.28□□□□□ -1.4
CCDC57-208ENST00000475635 MT2AP02795 61 aa6.26□□□□□ -1.41
CCDC57-208ENST00000475635 SYNE2Q8WXH0 6885 aaKnown RBP6.26□□□□□ -1.41
CCDC57-208ENST00000475635 HSBP1L1C9JCN9 74 aa6.25□□□□□ -1.41
CCDC57-208ENST00000475635 DSCR10P59022 87 aa6.25□□□□□ -1.41
CCDC57-208ENST00000475635 TEN1Q86WV5 123 aa6.25□□□□□ -1.41
CCDC57-208ENST00000475635 A0A087WSZ3 146 aa6.24□□□□□ -1.41
CCDC57-208ENST00000475635 FAM236DA0A1B0GTK5 79 aa6.23□□□□□ -1.41
CCDC57-208ENST00000475635 FAM236CP0DP71 79 aa6.23□□□□□ -1.41
CCDC57-208ENST00000475635 LCE2BO14633 110 aa6.22□□□□□ -1.41
CCDC57-208ENST00000475635 MT1FP04733 61 aa6.22□□□□□ -1.41
CCDC57-208ENST00000475635 NDUFV3P56181 108 aaKnown RBP6.22□□□□□ -1.41
CCDC57-208ENST00000475635 HIST1H4GQ99525 98 aa6.22□□□□□ -1.41
CCDC57-208ENST00000475635 KRTAP16-1A8MUX0 517 aa6.21□□□□□ -1.42
CCDC57-208ENST00000475635 KRTAP19-1Q8IUB9 90 aa6.21□□□□□ -1.42
CCDC57-208ENST00000475635 SNCGO76070 127 aa6.19□□□□□ -1.42
CCDC57-208ENST00000475635 FAM218AQ96MZ4 157 aa6.19□□□□□ -1.42
CCDC57-208ENST00000475635 SIGMAR1Q99720 223 aa6.19□□□□□ -1.42
CCDC57-208ENST00000475635 HIST1H2BLQ99880 126 aa6.19□□□□□ -1.42
CCDC57-208ENST00000475635 H3BMG7 143 aa6.18□□□□□ -1.42
CCDC57-208ENST00000475635 LINC00313P59037 77 aa6.18□□□□□ -1.42
CCDC57-208ENST00000475635 KRTAP10-10P60014 251 aa6.18□□□□□ -1.42
CCDC57-208ENST00000475635 HIST3H2BBQ8N257 126 aa6.18□□□□□ -1.42
CCDC57-208ENST00000475635 KRTAP9-3Q9BYQ3 159 aa6.18□□□□□ -1.42
CCDC57-208ENST00000475635 RBM12B-AS1Q9P1G2 102 aa6.18□□□□□ -1.42
CCDC57-208ENST00000475635 H0YGX0 51 aa6.17□□□□□ -1.42
CCDC57-208ENST00000475635 S100A2P29034 98 aa6.17□□□□□ -1.42
CCDC57-208ENST00000475635 MACF1Q9UPN3 7388 aaKnown RBP6.16□□□□□ -1.42
CCDC57-208ENST00000475635 HRES1P13985 223 aa6.16□□□□□ -1.42
CCDC57-208ENST00000475635 MPLKIPQ8TAP9 179 aa6.16□□□□□ -1.42
CCDC57-208ENST00000475635 RAB37Q96AX2 223 aa6.16□□□□□ -1.42
CCDC57-208ENST00000475635 A0A1W2PNM2 257 aa6.15□□□□□ -1.42
CCDC57-208ENST00000475635 IGKV4-1P06312 121 aa6.15□□□□□ -1.42
CCDC57-208ENST00000475635 FABP2P12104 132 aa6.15□□□□□ -1.42
CCDC57-208ENST00000475635 COX8AP10176 69 aa6.14□□□□□ -1.43
CCDC57-208ENST00000475635 GHRHP01286 108 aa6.13□□□□□ -1.43
CCDC57-208ENST00000475635 NOTCH2NLQ7Z3S9 236 aa6.13□□□□□ -1.43
CCDC57-208ENST00000475635 A0A0B4J2C4 111 aa6.12□□□□□ -1.43
CCDC57-208ENST00000475635 S100A1P23297 94 aa6.12□□□□□ -1.43
CCDC57-208ENST00000475635 DLEU1O43261 78 aa6.11□□□□□ -1.43
CCDC57-208ENST00000475635 A0A1B0GX51 115 aa6.1□□□□□ -1.43
CCDC57-208ENST00000475635 TRBV7-4A0A0J9YYF1 115 aa6.09□□□□□ -1.43
CCDC57-208ENST00000475635 DEFB116Q30KQ4 102 aa6.09□□□□□ -1.43
CCDC57-208ENST00000475635 ANKRD29Q8N6D5 301 aa6.09□□□□□ -1.43
CCDC57-208ENST00000475635 IGHV6-1A0A0B4J1U7 121 aa6.08□□□□□ -1.44
CCDC57-208ENST00000475635 A0A1B0GV72 72 aa6.08□□□□□ -1.44
CCDC57-208ENST00000475635 S100A6P06703 90 aa6.07□□□□□ -1.44
CCDC57-208ENST00000475635 C14orf144Q96I85 54 aa6.07□□□□□ -1.44
CCDC57-208ENST00000475635 LINC00472Q9H8W2 130 aa6.07□□□□□ -1.44
CCDC57-208ENST00000475635 HIGD1BQ9P298 99 aa6.07□□□□□ -1.44
CCDC57-208ENST00000475635 PRO1854Q9UHT4 67 aa6.06□□□□□ -1.44
CCDC57-208ENST00000475635 MTURNQ8N3F0 131 aa6.05□□□□□ -1.44
CCDC57-208ENST00000475635 LINC00846Q9NV44 126 aa6.05□□□□□ -1.44
CCDC57-208ENST00000475635 TRIAP1O43715 76 aa6.04□□□□□ -1.44
CCDC57-208ENST00000475635 C2orf91Q6ZV80 131 aa6.04□□□□□ -1.44
CCDC57-208ENST00000475635 ORMDL1Q9P0S3 153 aa6.04□□□□□ -1.44
CCDC57-208ENST00000475635 DNAL4O96015 105 aa6.03□□□□□ -1.44
CCDC57-208ENST00000475635 TRACP01848 142 aa6.03□□□□□ -1.44
CCDC57-208ENST00000475635 CCKP06307 115 aa6.03□□□□□ -1.44
CCDC57-208ENST00000475635 KRTAP19-6Q3LI70 58 aa6.03□□□□□ -1.44
CCDC57-208ENST00000475635 CEND1Q8N111 149 aa6.03□□□□□ -1.44
CCDC57-208ENST00000475635 PAM16Q9Y3D7 125 aa6.02□□□□□ -1.45
CCDC57-208ENST00000475635 TMEM238LA0A1B0GVL6 79 aa6.01□□□□□ -1.45
CCDC57-208ENST00000475635 A0A1B0GVX0 72 aa6.01□□□□□ -1.45
CCDC57-208ENST00000475635 A6NJY4 79 aa6.01□□□□□ -1.45
CCDC57-208ENST00000475635 C8orf87E5RJ46 101 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms