RNA–Protein interactions for RNA: ENST00000475427.2

PDE6C-202, Transcript of phosphodiesterase 6C, humanhuman

TSL 2

Gene PDE6C, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-202ENST00000475427 SMCO1Q147U7 214 aa-1.98□□□□□ -2.73
PDE6C-202ENST00000475427 SKA2Q8WVK7 121 aaPredicted RBP-1.98□□□□□ -2.73
PDE6C-202ENST00000475427 SMIM3Q9BZL3 60 aa-1.98□□□□□ -2.73
PDE6C-202ENST00000475427 PCBD2Q9H0N5 130 aa-1.98□□□□□ -2.73
PDE6C-202ENST00000475427 ANKRD36BQ8N2N9 1353 aa-1.98□□□□□ -2.73
PDE6C-202ENST00000475427 MYH4Q9Y623 1939 aa-1.99□□□□□ -2.73
PDE6C-202ENST00000475427 CEP250Q9BV73 2442 aa-1.99□□□□□ -2.73
PDE6C-202ENST00000475427 RGPD1P0DJD0 1748 aa-1.99□□□□□ -2.73
PDE6C-202ENST00000475427 H3BUA1 57 aa-1.99□□□□□ -2.73
PDE6C-202ENST00000475427 RPS27P42677 84 aaKnown RBP-1.99□□□□□ -2.73
PDE6C-202ENST00000475427 CATR1Q13166 79 aa-1.99□□□□□ -2.73
PDE6C-202ENST00000475427 RPS27LQ71UM5 84 aaKnown RBP-1.99□□□□□ -2.73
PDE6C-202ENST00000475427 C1orf54Q8WWF1 131 aa-1.99□□□□□ -2.73
PDE6C-202ENST00000475427 MLH3Q9UHC1 1453 aa-2□□□□□ -2.73
PDE6C-202ENST00000475427 NAP1L6A6NFF2 107 aa-2□□□□□ -2.73
PDE6C-202ENST00000475427 CRYM-AS1A6NIL9 109 aa-2□□□□□ -2.73
PDE6C-202ENST00000475427 M0R2Z0 102 aa-2□□□□□ -2.73
PDE6C-202ENST00000475427 BVES-AS1Q5T3Y7 98 aa-2□□□□□ -2.73
PDE6C-202ENST00000475427 ZNF436-AS1Q8NC38 126 aaPredicted RBP-2□□□□□ -2.73
PDE6C-202ENST00000475427 CGREF1Q99674 301 aa-2□□□□□ -2.73
PDE6C-202ENST00000475427 CCDC167Q9P0B6 97 aa-2□□□□□ -2.73
PDE6C-202ENST00000475427 SCAPERQ9BY12 1400 aa-2□□□□□ -2.73
PDE6C-202ENST00000475427 BAZ1AQ9NRL2 1556 aaPredicted RBP-2.01□□□□□ -2.73
PDE6C-202ENST00000475427 TRBV25-1A0A075B6N4 114 aa-2.01□□□□□ -2.73
PDE6C-202ENST00000475427 IQCF6A8MYZ5 107 aa-2.01□□□□□ -2.73
PDE6C-202ENST00000475427 D6R8Y8 96 aa-2.01□□□□□ -2.73
PDE6C-202ENST00000475427 COPZ1P61923 177 aa-2.01□□□□□ -2.73
PDE6C-202ENST00000475427 MUSTN1Q8IVN3 82 aa-2.01□□□□□ -2.73
PDE6C-202ENST00000475427 SPANXCQ9NY87 97 aa-2.01□□□□□ -2.73
PDE6C-202ENST00000475427 GSKIPQ9P0R6 139 aa-2.01□□□□□ -2.73
PDE6C-202ENST00000475427 GINS2Q9Y248 185 aa-2.01□□□□□ -2.73
PDE6C-202ENST00000475427 DOT1LQ8TEK3 1739 aa-2.01□□□□□ -2.73
PDE6C-202ENST00000475427 FHAD1B1AJZ9 1412 aa-2.01□□□□□ -2.73
PDE6C-202ENST00000475427 PIK3C2BO00750 1634 aa-2.02□□□□□ -2.73
PDE6C-202ENST00000475427 ZC3H13Q5T200 1668 aaKnown RBP-2.02□□□□□ -2.73
PDE6C-202ENST00000475427 CHD1O14646 1710 aa-2.02□□□□□ -2.73
PDE6C-202ENST00000475427 LRRIQ1Q96JM4 1722 aa-2.02□□□□□ -2.73
PDE6C-202ENST00000475427 PMCHL1Q16048 86 aa-2.02□□□□□ -2.73
PDE6C-202ENST00000475427 CCDC58Q4VC31 144 aa-2.02□□□□□ -2.73
PDE6C-202ENST00000475427 DPH3P1Q9H4G8 78 aa-2.02□□□□□ -2.73
PDE6C-202ENST00000475427 KIAA0586Q9BVV6 1533 aa-2.02□□□□□ -2.73
PDE6C-202ENST00000475427 KIF21BO75037 1637 aa-2.02□□□□□ -2.73
PDE6C-202ENST00000475427 DDX60LQ5H9U9 1706 aaKnown RBP-2.03□□□□□ -2.73
PDE6C-202ENST00000475427 APOC2P02655 101 aa-2.03□□□□□ -2.73
PDE6C-202ENST00000475427 ATP5EP56381 51 aaPredicted RBP-2.03□□□□□ -2.73
PDE6C-202ENST00000475427 ALKAL2Q6UX46 152 aa-2.03□□□□□ -2.73
PDE6C-202ENST00000475427 CACFD1Q9UGQ2 172 aa-2.03□□□□□ -2.73
PDE6C-202ENST00000475427 HSPB11Q9Y547 144 aa-2.03□□□□□ -2.73
PDE6C-202ENST00000475427 PLIN4Q96Q06 1357 aa-2.03□□□□□ -2.73
PDE6C-202ENST00000475427 ABCC2Q92887 1545 aa-2.03□□□□□ -2.73
PDE6C-202ENST00000475427 TRAV21A0A0B4J279 112 aa-2.04□□□□□ -2.74
PDE6C-202ENST00000475427 A0A1B0GV72 72 aa-2.04□□□□□ -2.74
PDE6C-202ENST00000475427 OOSP1A8MZH6 123 aa-2.04□□□□□ -2.74
PDE6C-202ENST00000475427 CROCC2H7BZ55 1655 aa-2.04□□□□□ -2.74
PDE6C-202ENST00000475427 LTN1O94822 1766 aa-2.04□□□□□ -2.74
PDE6C-202ENST00000475427 ATP10BO94823 1461 aa-2.04□□□□□ -2.74
PDE6C-202ENST00000475427 RPS25P62851 125 aaKnown RBP-2.04□□□□□ -2.74
PDE6C-202ENST00000475427 ITSN1Q15811 1721 aa-2.04□□□□□ -2.74
PDE6C-202ENST00000475427 CC2D2AQ9P2K1 1620 aa-2.04□□□□□ -2.74
PDE6C-202ENST00000475427 MED14O60244 1454 aa-2.05□□□□□ -2.74
PDE6C-202ENST00000475427 A0A1B0GUT8 65 aa-2.05□□□□□ -2.74
PDE6C-202ENST00000475427 TSTD3H0UI37 97 aa-2.05□□□□□ -2.74
PDE6C-202ENST00000475427 SFTA3P0C7M3 94 aa-2.05□□□□□ -2.74
PDE6C-202ENST00000475427 DR1Q01658 176 aa-2.05□□□□□ -2.74
PDE6C-202ENST00000475427 HMGN3Q15651 99 aa-2.05□□□□□ -2.74
PDE6C-202ENST00000475427 MEIG1Q5JSS6 88 aa-2.05□□□□□ -2.74
PDE6C-202ENST00000475427 TSTD1Q8NFU3 115 aa-2.05□□□□□ -2.74
PDE6C-202ENST00000475427 CCNB3Q8WWL7 1395 aa-2.06□□□□□ -2.74
PDE6C-202ENST00000475427 UQCRHP07919 91 aa-2.06□□□□□ -2.74
PDE6C-202ENST00000475427 G0S2P27469 103 aa-2.06□□□□□ -2.74
PDE6C-202ENST00000475427 MINOS1Q5TGZ0 78 aa-2.06□□□□□ -2.74
PDE6C-202ENST00000475427 NCBP2-AS2Q69YL0 99 aa-2.06□□□□□ -2.74
PDE6C-202ENST00000475427 NRXN1Q9ULB1 1477 aa-2.07□□□□□ -2.74
PDE6C-202ENST00000475427 USP34Q70CQ2 3546 aa-2.07□□□□□ -2.74
PDE6C-202ENST00000475427 FAM24AA6NFZ4 105 aa-2.07□□□□□ -2.74
PDE6C-202ENST00000475427 NDUFC1O43677 76 aa-2.07□□□□□ -2.74
PDE6C-202ENST00000475427 KRTDAPP60985 99 aa-2.07□□□□□ -2.74
PDE6C-202ENST00000475427 MRPS10P82664 201 aaKnown RBP-2.07□□□□□ -2.74
PDE6C-202ENST00000475427 ETDBQ3ZM63 59 aa-2.07□□□□□ -2.74
PDE6C-202ENST00000475427 PFDN5Q99471 154 aa-2.07□□□□□ -2.74
PDE6C-202ENST00000475427 DDA1Q9BW61 102 aa-2.07□□□□□ -2.74
PDE6C-202ENST00000475427 THOC2Q8NI27 1593 aaKnown RBP-2.07□□□□□ -2.74
PDE6C-202ENST00000475427 CD163L1Q9NR16 1453 aa-2.07□□□□□ -2.74
PDE6C-202ENST00000475427 RAPGEF2Q9Y4G8 1499 aa-2.07□□□□□ -2.74
PDE6C-202ENST00000475427 LOC400499M0QZD8 3231 aa-2.08□□□□□ -2.74
PDE6C-202ENST00000475427 DEFB131BA0A096LNP1 70 aa-2.08□□□□□ -2.74
PDE6C-202ENST00000475427 hADV29S1A0JD25 119 aa-2.08□□□□□ -2.74
PDE6C-202ENST00000475427 FCER1GP30273 86 aa-2.08□□□□□ -2.74
PDE6C-202ENST00000475427 GNG10P50151 68 aa-2.08□□□□□ -2.74
PDE6C-202ENST00000475427 CKS1BP61024 79 aa-2.08□□□□□ -2.74
PDE6C-202ENST00000475427 SPANXA1Q9NS26 97 aa-2.08□□□□□ -2.74
PDE6C-202ENST00000475427 DNAH12Q6ZR08 3092 aa-2.08□□□□□ -2.74
PDE6C-202ENST00000475427 ASXL1Q8IXJ9 1541 aa-2.08□□□□□ -2.74
PDE6C-202ENST00000475427 PPLO60437 1756 aa-2.08□□□□□ -2.74
PDE6C-202ENST00000475427 NCOA2Q15596 1464 aa-2.08□□□□□ -2.74
PDE6C-202ENST00000475427 KTN1Q86UP2 1357 aaKnown RBP-2.09□□□□□ -2.74
PDE6C-202ENST00000475427 E5RI56 91 aa-2.09□□□□□ -2.74
PDE6C-202ENST00000475427 MPC2O95563 127 aa-2.09□□□□□ -2.74
PDE6C-202ENST00000475427 ACBD7Q8N6N7 88 aa-2.09□□□□□ -2.74
PDE6C-202ENST00000475427 C20orf78Q9BR46 151 aa-2.09□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms